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The map label for this gene is ydhD [C]

Identifier: 34499075

GI number: 34499075

Start: 3925782

End: 3926093

Strand: Direct

Name: ydhD [C]

Synonym: CV_3620

Alternate gene names: 34499075

Gene position: 3925782-3926093 (Clockwise)

Preceding gene: 34499074

Following gene: 34499076

Centisome position: 82.63

GC content: 58.97

Gene sequence:

>312_bases
ATGTCGATTCAACAAGATATCCAGCAGACCGTCGCCGACAACGCCGTGGTGCTGTTCATGAAAGGCTCCGCCCAGTTCCC
GCAGTGCGGCTTCTCGTCGCGCGCGGTGCAGATCCTGAAGGCCTGCGGCGTGGACAACTTCCTGACCGTGGACGTGCTGC
GCGATCCCGACATCCGCCAGGGCATCAAGGATTTCTCCAACTGGCCGACCATCCCGCAACTGTACGTGAAGGGCGAATTC
GTCGGCGGTTCGGACATCATGTACGAGATGTACCAGAACGGCGAACTGCAGGATCTGCTGAAGGATCTGTAA

Upstream 100 bases:

>100_bases
GCCAAATTGACCAGCCAGCCGCCCGCACGTAGAATAACCTATTGAAAAGATCGGGTATTTCCGCCGGCTCCTTCGCCGGC
CCACAGCAAGGATTCAATAC

Downstream 100 bases:

>100_bases
GCATTTCAAGCAACCCGGCCCCGGCCGGGTTTTGCGTTTTCAGGGTCATCCGCGTTAGAATGATGCCCCATACCATCCAC
GGCAGCCCTGCGGCTGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSIQQDIQQTVADNAVVLFMKGSAQFPQCGFSSRAVQILKACGVDNFLTVDVLRDPDIRQGIKDFSNWPTIPQLYVKGEF
VGGSDIMYEMYQNGELQDLLKDL

Sequences:

>Translated_103_residues
MSIQQDIQQTVADNAVVLFMKGSAQFPQCGFSSRAVQILKACGVDNFLTVDVLRDPDIRQGIKDFSNWPTIPQLYVKGEF
VGGSDIMYEMYQNGELQDLLKDL
>Mature_102_residues
SIQQDIQQTVADNAVVLFMKGSAQFPQCGFSSRAVQILKACGVDNFLTVDVLRDPDIRQGIKDFSNWPTIPQLYVKGEFV
GGSDIMYEMYQNGELQDLLKDL

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=93, Percent_Identity=56.989247311828, Blast_Score=119, Evalue=5e-28,
Organism=Homo sapiens, GI95113651, Length=87, Percent_Identity=54.0229885057471, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1787943, Length=98, Percent_Identity=55.1020408163265, Blast_Score=124, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=47.4747474747475, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71988153, Length=88, Percent_Identity=45.4545454545455, Blast_Score=90, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71988159, Length=109, Percent_Identity=37.6146788990826, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325198, Length=102, Percent_Identity=50, Blast_Score=114, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6320303, Length=87, Percent_Identity=49.4252873563218, Blast_Score=85, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321022, Length=74, Percent_Identity=54.0540540540541, Blast_Score=85, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24642023, Length=91, Percent_Identity=51.6483516483517, Blast_Score=105, Evalue=6e-24,
Organism=Drosophila melanogaster, GI19921242, Length=100, Percent_Identity=39, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11550; Mature: 11419

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQQDIQQTVADNAVVLFMKGSAQFPQCGFSSRAVQILKACGVDNFLTVDVLRDPDIRQ
CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHH
GIKDFSNWPTIPQLYVKGEFVGGSDIMYEMYQNGELQDLLKDL
HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
SIQQDIQQTVADNAVVLFMKGSAQFPQCGFSSRAVQILKACGVDNFLTVDVLRDPDIRQ
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHH
GIKDFSNWPTIPQLYVKGEFVGGSDIMYEMYQNGELQDLLKDL
HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]