Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34499054

Identifier: 34499054

GI number: 34499054

Start: 3906326

End: 3907018

Strand: Reverse

Name: 34499054

Synonym: CV_3599

Alternate gene names: NA

Gene position: 3907018-3906326 (Counterclockwise)

Preceding gene: 34499055

Following gene: 34499053

Centisome position: 82.23

GC content: 69.55

Gene sequence:

>693_bases
ATGAGCGAGAGGACGATAGCCGGCGTGCTGGAGGCCGTGCGCCGCCAGGCTTTGCCGGCCGACGACCGGGAGTTCTGCGT
CGCGCTGCACGACTACGTGCGCGACCGGGTGCGTTTCGGCTTCACCGCCGGTTTCGAGCGCGTCACGCCGGAGCAGACGC
TGGCCTTGGGCCGCGGCCATTGCAACGCCCAGGCCGACCTGCTGTGCGCCTTGCTGCGCGGCGCCGGATTCGAGGCCAGC
CTGCGTTTCGTCGCGCTGGACAAGCGCATCCTGCGCCACGCGGTGCCGGCGCCGGTGCTGTTCTGTCTGCCCTCCAGACT
GTTCCACGCGGTCACGCAGCTTAAGCTGGGCGGCTTGCGCTGCAATATCGACAGCTATATTTTCGACCGCTCGGGTTTCC
GCCAGCAGCGCGCGCGGCTGCAAGCCGCGGGGTGGGAGCGCGGCTTCGGGCTGGGACGCGGCGCGGTCTGCGAATGGAGC
GGCCGCGGCGACGCGTTTTCCCAGGCCGAGCCCGGCAATCTCAAGCCCGACAACCTCGAATTCCCCTCGCTGGCCGAAGC
CGTGGCCAGCGGCGCCGGCAACAACACTTTGCTCGGCATCCATTTCAACCAGTGGCTGGCCTGCGTGCCGACGCCGCTGC
GCCGCGCCAGCGAGCGCTATCTGAACAGCCGCCTGGGGCCCGCCATGACTTAG

Upstream 100 bases:

>100_bases
TGCCGCTGTTCTTCGCGCTGCTGTCGCTGCCGGCGCTGCTGGCGGCAGCGGCCTTGCTGCTCAAGCGCCGTTCCATCGCG
ATGGCGAGGAGGGCATGGGC

Downstream 100 bases:

>100_bases
CGGCCGCTGCGGCGTCGTGTCCGGCCCGAGGGGCCGGCGTCTGATCATCCGTCCAACGAGGAAACCAACCATGTTGCCTG
TAGCAAGGATTGCTCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSERTIAGVLEAVRRQALPADDREFCVALHDYVRDRVRFGFTAGFERVTPEQTLALGRGHCNAQADLLCALLRGAGFEAS
LRFVALDKRILRHAVPAPVLFCLPSRLFHAVTQLKLGGLRCNIDSYIFDRSGFRQQRARLQAAGWERGFGLGRGAVCEWS
GRGDAFSQAEPGNLKPDNLEFPSLAEAVASGAGNNTLLGIHFNQWLACVPTPLRRASERYLNSRLGPAMT

Sequences:

>Translated_230_residues
MSERTIAGVLEAVRRQALPADDREFCVALHDYVRDRVRFGFTAGFERVTPEQTLALGRGHCNAQADLLCALLRGAGFEAS
LRFVALDKRILRHAVPAPVLFCLPSRLFHAVTQLKLGGLRCNIDSYIFDRSGFRQQRARLQAAGWERGFGLGRGAVCEWS
GRGDAFSQAEPGNLKPDNLEFPSLAEAVASGAGNNTLLGIHFNQWLACVPTPLRRASERYLNSRLGPAMT
>Mature_229_residues
SERTIAGVLEAVRRQALPADDREFCVALHDYVRDRVRFGFTAGFERVTPEQTLALGRGHCNAQADLLCALLRGAGFEASL
RFVALDKRILRHAVPAPVLFCLPSRLFHAVTQLKLGGLRCNIDSYIFDRSGFRQQRARLQAAGWERGFGLGRGAVCEWSG
RGDAFSQAEPGNLKPDNLEFPSLAEAVASGAGNNTLLGIHFNQWLACVPTPLRRASERYLNSRLGPAMT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25296; Mature: 25165

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00308 LECTIN_LEGUME_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERTIAGVLEAVRRQALPADDREFCVALHDYVRDRVRFGFTAGFERVTPEQTLALGRGH
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
CNAQADLLCALLRGAGFEASLRFVALDKRILRHAVPAPVLFCLPSRLFHAVTQLKLGGLR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEE
CNIDSYIFDRSGFRQQRARLQAAGWERGFGLGRGAVCEWSGRGDAFSQAEPGNLKPDNLE
ECHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
FPSLAEAVASGAGNNTLLGIHFNQWLACVPTPLRRASERYLNSRLGPAMT
CHHHHHHHHCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SERTIAGVLEAVRRQALPADDREFCVALHDYVRDRVRFGFTAGFERVTPEQTLALGRGH
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
CNAQADLLCALLRGAGFEASLRFVALDKRILRHAVPAPVLFCLPSRLFHAVTQLKLGGLR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEE
CNIDSYIFDRSGFRQQRARLQAAGWERGFGLGRGAVCEWSGRGDAFSQAEPGNLKPDNLE
ECHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
FPSLAEAVASGAGNNTLLGIHFNQWLACVPTPLRRASERYLNSRLGPAMT
CHHHHHHHHCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA