| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cysH [H]
Identifier: 34499029
GI number: 34499029
Start: 3881990
End: 3882694
Strand: Reverse
Name: cysH [H]
Synonym: CV_3574
Alternate gene names: 34499029
Gene position: 3882694-3881990 (Counterclockwise)
Preceding gene: 34499031
Following gene: 34499028
Centisome position: 81.72
GC content: 65.96
Gene sequence:
>705_bases ATGAGCCTGGAGTCCAAACTCGCCGCCACCACGGCCCTGCTGCAAACCATCGCCGCCGAACATCCCGACGCGGTGCTGGC CAACAGCTACGGCGCCGAAGACATGGTGCTGACCGACCTGATCGCCCGTCTCGGCCTGCCGCTGGAAAGCTTCAGCCTGG ACACCGGCCGCCTGCCGGCCGAAACCTATGAGTTGATGCAGCAAGTCGCCGAGCGTTATCCAGGCCATCCGGTCAGGATG TACTTCCCCGACACCGCCGCCACCGAGCAGTACGTCAACTTCCACGGCATCAACGGCTTCTATCGGAGCGTCGAGTTGCG CAAGTCCTGTTGCGCGGTTCGCAAGCTGGAGCCGCTGAAGCGCGCGCTGGCCGGCCGATCGGCCTGGATCACCGGCCTGC GCCGCCAGCAGTCGCCGACGCGCCAGGACCTGGCCGACAGGGAGTACGACGCCGACAACGGGCTCGTGAAATTCAGCCCG CTGCTGGAATGGACGGAAGCCGAAGTGTGGCAGTACCTGAAGGAAAACCAGGTGCCGTACAACGCGCTGCACGATCGGCA CTATCCGTCGATAGGCTGCGCGCCCTGTACCCGCGCCATCAGCGTGGGCGAAGACGTGCGCGCCGGCCGCTGGTGGTGGG AAAACCCGGAAACCAAGGAGTGCGGGCTGCACGCGAAGTCCAGTCCGCTGCAGCGCCCCGTCTGA
Upstream 100 bases:
>100_bases TCCTCTATACAACCTGTAGTCATTAAATACTAACACAATATTCTTTTAGGTTTATAAGCGCTTTGGTTAGGATACGCTCG AACCATCCCCGGAGTGCTTG
Downstream 100 bases:
>100_bases AACGCCGGCCCGCCGATGCGGGCATCCCCGTTGGAATCCAAACATGTATCGATACGATGAAGTAGACCATCGGCTGGTGC GCGAGCGCGTGGTCCAGTTT
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSLESKLAATTALLQTIAAEHPDAVLANSYGAEDMVLTDLIARLGLPLESFSLDTGRLPAETYELMQQVAERYPGHPVRM YFPDTAATEQYVNFHGINGFYRSVELRKSCCAVRKLEPLKRALAGRSAWITGLRRQQSPTRQDLADREYDADNGLVKFSP LLEWTEAEVWQYLKENQVPYNALHDRHYPSIGCAPCTRAISVGEDVRAGRWWWENPETKECGLHAKSSPLQRPV
Sequences:
>Translated_234_residues MSLESKLAATTALLQTIAAEHPDAVLANSYGAEDMVLTDLIARLGLPLESFSLDTGRLPAETYELMQQVAERYPGHPVRM YFPDTAATEQYVNFHGINGFYRSVELRKSCCAVRKLEPLKRALAGRSAWITGLRRQQSPTRQDLADREYDADNGLVKFSP LLEWTEAEVWQYLKENQVPYNALHDRHYPSIGCAPCTRAISVGEDVRAGRWWWENPETKECGLHAKSSPLQRPV >Mature_233_residues SLESKLAATTALLQTIAAEHPDAVLANSYGAEDMVLTDLIARLGLPLESFSLDTGRLPAETYELMQQVAERYPGHPVRMY FPDTAATEQYVNFHGINGFYRSVELRKSCCAVRKLEPLKRALAGRSAWITGLRRQQSPTRQDLADREYDADNGLVKFSPL LEWTEAEVWQYLKENQVPYNALHDRHYPSIGCAPCTRAISVGEDVRAGRWWWENPETKECGLHAKSSPLQRPV
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=230, Percent_Identity=27.8260869565217, Blast_Score=76, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325425, Length=215, Percent_Identity=31.6279069767442, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011798 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 26421; Mature: 26290
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLESKLAATTALLQTIAAEHPDAVLANSYGAEDMVLTDLIARLGLPLESFSLDTGRLPA CCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCH ETYELMQQVAERYPGHPVRMYFPDTAATEQYVNFHGINGFYRSVELRKSCCAVRKLEPLK HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RALAGRSAWITGLRRQQSPTRQDLADREYDADNGLVKFSPLLEWTEAEVWQYLKENQVPY HHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCH NALHDRHYPSIGCAPCTRAISVGEDVRAGRWWWENPETKECGLHAKSSPLQRPV HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure SLESKLAATTALLQTIAAEHPDAVLANSYGAEDMVLTDLIARLGLPLESFSLDTGRLPA CCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCH ETYELMQQVAERYPGHPVRMYFPDTAATEQYVNFHGINGFYRSVELRKSCCAVRKLEPLK HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RALAGRSAWITGLRRQQSPTRQDLADREYDADNGLVKFSPLLEWTEAEVWQYLKENQVPY HHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCH NALHDRHYPSIGCAPCTRAISVGEDVRAGRWWWENPETKECGLHAKSSPLQRPV HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]