| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cysI [H]
Identifier: 34499028
GI number: 34499028
Start: 3880288
End: 3881946
Strand: Reverse
Name: cysI [H]
Synonym: CV_3573
Alternate gene names: 34499028
Gene position: 3881946-3880288 (Counterclockwise)
Preceding gene: 34499029
Following gene: 34499027
Centisome position: 81.71
GC content: 64.74
Gene sequence:
>1659_bases ATGTATCGATACGATGAAGTAGACCATCGGCTGGTGCGCGAGCGCGTGGTCCAGTTTCGCGACCAGACGCGCCGCTTTCT GGCCGGCGAGCTGTCCGAGGACGAGTTCCGGCCGCTGCGCTTGATGAACGGCCTGTATATCCAGCGCCACGCGCCGATGC TGCGGGTGGCGATTCCCTATGGCCACTTGCGCAGCGAGCAGCTGAGAAAGCTGGCCGACATCGCCCGCCGCTACGACAAG GGCTATGGCCACTTCACCACCCGGCAGAACATCCAGTTCAACTGGCCGGAACTGGACAAGGTGCCGGATATTCTGGAAGA GCTGTCCACGGTGGAGATGCATGCGATTCAGACCTCCGGCAACTGCGTGCGCAACACCACCACCGACGCCTTCGCCGGCG TCGCCGCCGACCAGCTGTTCGACCCGCGTCCCTACTGCGAGATCATTCGGCAGTGGAGCACCATGCACCCTGAATTCAGC TTCCTGCCGCGCAAGTTCAAGATCGCGGTATCCGGCAGCATCGAGGATCGGGCGGCCACCATGGTCCACGACATCGGCCT GCACGTCAGCCGCAACGAGACCGGCGAGGCGGGATTCAAGGTGATCGTCGGCGGCGGGCTGGGCCGCACCCCAATGGTGG GCGAGGTGATACGCGAGTTCCTGCCGCGCCAGCACCTGCTGACCTATCTGGACGCGGTGCTGCGCGTCTACAACCGCTTC GGCCGCCGCGACAACAAATACAAGGCCCGGATCAAGATCCTGGTCAAGGCGATGACGCGCGACGGTTTCGCCGCCAAGGT GGAGGATGAGTGGAGCCATCTGAAGGATGGCCCTGCCACGCTGCGCGACGAGGATGTCGCCCATTACGCCAGCTTCTTCG CCGACCCGGACTACCCGGCGCTGGCCGACGATCCGGCGGAGCTGACTGGCCCGCTGGCCGAGGACAAGGCCTTCGCCCGC TGGTTCGAGCGCAATACCCGCGCCCACCGCCGGCCAGGCTACCGTTCCGTGGTGCTGTCGCTGAAGGAGAGCGGCGCCCC GCCGGGTGACATCACGTCTGAGCAGATGGAAGCCGCGGCCGACTGGGCCGACCGCTTCGGCTTCGGCGAGCTGCGCGTCG CACATGAGCAGAACCTGGTGCTGCCGGATGTGGCGCAGAAGGATCTGTACGCCTTGTGGCAGGCAGCCCGATCGCAGCGT ATGGCCACCCCGAACATCGGTCTACTGACCGACATCATCAGCTGCCCCGGCGGCGACTTCTGCTCGCTGGCCAACGCCCG CTCCATCCCGGTGGCCAACGCGATCCAGCAGACCTTCGACGATCTGGACTACCTGTACGACCTGGGCGACATCGCCTGTA ACTTCTCCGGCTGCATGAACGCCTGCGGCCATCATCATATCGGCAACATCGGCATCCTGGGCGTCGACAAGAACGGCGAG GAGTGGTACCAGATCACGCTGGGCGGCAGCCAGGGCAGCGACACCACGATCGGCAAGGTGATAGGCCCGTCCTTCGCTCA AGCCGACGTGCCGGTGGCCTTCTCCAAGATCATGCAGGTCTACATCGAGCGGCGGCTGGATGGCGAGCGCTTCATCGAAA CCCTGCGCCGCATCGGCGCGGAACCGTTCAAGGAGAGGGTGTATGCCCCAGTTCATTAA
Upstream 100 bases:
>100_bases GAAACCAAGGAGTGCGGGCTGCACGCGAAGTCCAGTCCGCTGCAGCGCCCCGTCTGAAACGCCGGCCCGCCGATGCGGGC ATCCCCGTTGGAATCCAAAC
Downstream 100 bases:
>100_bases GGATGGCCGCTTGCAGGCCGATGCCTGGAGGCTGTTGCGCCCGGATGAGAGCGGCGCGCTGCCGGCGGCGGACCCCTCCG AGGACGTGATCGTGCCGCTG
Product: sulfite reductase hemoprotein subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MYRYDEVDHRLVRERVVQFRDQTRRFLAGELSEDEFRPLRLMNGLYIQRHAPMLRVAIPYGHLRSEQLRKLADIARRYDK GYGHFTTRQNIQFNWPELDKVPDILEELSTVEMHAIQTSGNCVRNTTTDAFAGVAADQLFDPRPYCEIIRQWSTMHPEFS FLPRKFKIAVSGSIEDRAATMVHDIGLHVSRNETGEAGFKVIVGGGLGRTPMVGEVIREFLPRQHLLTYLDAVLRVYNRF GRRDNKYKARIKILVKAMTRDGFAAKVEDEWSHLKDGPATLRDEDVAHYASFFADPDYPALADDPAELTGPLAEDKAFAR WFERNTRAHRRPGYRSVVLSLKESGAPPGDITSEQMEAAADWADRFGFGELRVAHEQNLVLPDVAQKDLYALWQAARSQR MATPNIGLLTDIISCPGGDFCSLANARSIPVANAIQQTFDDLDYLYDLGDIACNFSGCMNACGHHHIGNIGILGVDKNGE EWYQITLGGSQGSDTTIGKVIGPSFAQADVPVAFSKIMQVYIERRLDGERFIETLRRIGAEPFKERVYAPVH
Sequences:
>Translated_552_residues MYRYDEVDHRLVRERVVQFRDQTRRFLAGELSEDEFRPLRLMNGLYIQRHAPMLRVAIPYGHLRSEQLRKLADIARRYDK GYGHFTTRQNIQFNWPELDKVPDILEELSTVEMHAIQTSGNCVRNTTTDAFAGVAADQLFDPRPYCEIIRQWSTMHPEFS FLPRKFKIAVSGSIEDRAATMVHDIGLHVSRNETGEAGFKVIVGGGLGRTPMVGEVIREFLPRQHLLTYLDAVLRVYNRF GRRDNKYKARIKILVKAMTRDGFAAKVEDEWSHLKDGPATLRDEDVAHYASFFADPDYPALADDPAELTGPLAEDKAFAR WFERNTRAHRRPGYRSVVLSLKESGAPPGDITSEQMEAAADWADRFGFGELRVAHEQNLVLPDVAQKDLYALWQAARSQR MATPNIGLLTDIISCPGGDFCSLANARSIPVANAIQQTFDDLDYLYDLGDIACNFSGCMNACGHHHIGNIGILGVDKNGE EWYQITLGGSQGSDTTIGKVIGPSFAQADVPVAFSKIMQVYIERRLDGERFIETLRRIGAEPFKERVYAPVH >Mature_552_residues MYRYDEVDHRLVRERVVQFRDQTRRFLAGELSEDEFRPLRLMNGLYIQRHAPMLRVAIPYGHLRSEQLRKLADIARRYDK GYGHFTTRQNIQFNWPELDKVPDILEELSTVEMHAIQTSGNCVRNTTTDAFAGVAADQLFDPRPYCEIIRQWSTMHPEFS FLPRKFKIAVSGSIEDRAATMVHDIGLHVSRNETGEAGFKVIVGGGLGRTPMVGEVIREFLPRQHLLTYLDAVLRVYNRF GRRDNKYKARIKILVKAMTRDGFAAKVEDEWSHLKDGPATLRDEDVAHYASFFADPDYPALADDPAELTGPLAEDKAFAR WFERNTRAHRRPGYRSVVLSLKESGAPPGDITSEQMEAAADWADRFGFGELRVAHEQNLVLPDVAQKDLYALWQAARSQR MATPNIGLLTDIISCPGGDFCSLANARSIPVANAIQQTFDDLDYLYDLGDIACNFSGCMNACGHHHIGNIGILGVDKNGE EWYQITLGGSQGSDTTIGKVIGPSFAQADVPVAFSKIMQVYIERRLDGERFIETLRRIGAEPFKERVYAPVH
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
None
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.7.7.1 [H]
Molecular weight: Translated: 62396; Mature: 62396
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRYDEVDHRLVRERVVQFRDQTRRFLAGELSEDEFRPLRLMNGLYIQRHAPMLRVAIPY CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCEEEEECCC GHLRSEQLRKLADIARRYDKGYGHFTTRQNIQFNWPELDKVPDILEELSTVEMHAIQTSG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEECCC NCVRNTTTDAFAGVAADQLFDPRPYCEIIRQWSTMHPEFSFLPRKFKIAVSGSIEDRAAT CEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCHHHHHH MVHDIGLHVSRNETGEAGFKVIVGGGLGRTPMVGEVIREFLPRQHLLTYLDAVLRVYNRF HHHHHCCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GRRDNKYKARIKILVKAMTRDGFAAKVEDEWSHLKDGPATLRDEDVAHYASFFADPDYPA CCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC LADDPAELTGPLAEDKAFARWFERNTRAHRRPGYRSVVLSLKESGAPPGDITSEQMEAAA CCCCCHHHCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH DWADRFGFGELRVAHEQNLVLPDVAQKDLYALWQAARSQRMATPNIGLLTDIISCPGGDF HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCH CSLANARSIPVANAIQQTFDDLDYLYDLGDIACNFSGCMNACGHHHIGNIGILGVDKNGE HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCC EWYQITLGGSQGSDTTIGKVIGPSFAQADVPVAFSKIMQVYIERRLDGERFIETLRRIGA EEEEEEECCCCCCCCCHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC EPFKERVYAPVH CCHHHCCCCCCC >Mature Secondary Structure MYRYDEVDHRLVRERVVQFRDQTRRFLAGELSEDEFRPLRLMNGLYIQRHAPMLRVAIPY CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCEEEEECCC GHLRSEQLRKLADIARRYDKGYGHFTTRQNIQFNWPELDKVPDILEELSTVEMHAIQTSG CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEECCC NCVRNTTTDAFAGVAADQLFDPRPYCEIIRQWSTMHPEFSFLPRKFKIAVSGSIEDRAAT CEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCHHHHHH MVHDIGLHVSRNETGEAGFKVIVGGGLGRTPMVGEVIREFLPRQHLLTYLDAVLRVYNRF HHHHHCCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GRRDNKYKARIKILVKAMTRDGFAAKVEDEWSHLKDGPATLRDEDVAHYASFFADPDYPA CCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC LADDPAELTGPLAEDKAFARWFERNTRAHRRPGYRSVVLSLKESGAPPGDITSEQMEAAA CCCCCHHHCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH DWADRFGFGELRVAHEQNLVLPDVAQKDLYALWQAARSQRMATPNIGLLTDIISCPGGDF HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCH CSLANARSIPVANAIQQTFDDLDYLYDLGDIACNFSGCMNACGHHHIGNIGILGVDKNGE HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCC EWYQITLGGSQGSDTTIGKVIGPSFAQADVPVAFSKIMQVYIERRLDGERFIETLRRIGA EEEEEEECCCCCCCCCHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC EPFKERVYAPVH CCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8490140 [H]