| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is bfr [H]
Identifier: 34499007
GI number: 34499007
Start: 3860643
End: 3861110
Strand: Reverse
Name: bfr [H]
Synonym: CV_3552
Alternate gene names: 34499007
Gene position: 3861110-3860643 (Counterclockwise)
Preceding gene: 34499008
Following gene: 34499006
Centisome position: 81.27
GC content: 62.82
Gene sequence:
>468_bases ATGAAGGGCGATCCCAAGACCATAGCGCTGCTCAACGATTTGCTGGCCGAAGAGCTGTCCGCCGCCGACCAGTATTTCAT CCATGCCGAGATGTACAAGGACATGGGGCTGAGCAAGCTGTTCGAGCGCATCGACCACGAGCGCGAGGACGAACTGGAGC ATGCGCGCACGCTGATCGCCCGCACCCTGTTCCTGCAGGGGCGTCCCGATGTGGCGCGCCGCGTGCCGATCAAGGTGGGC GAGGACGTGCCGGCGATGCTGAAGGCCGATCTGGAGGTGGAGTACCGCGTTGGCGCCTTGCTGAAGGACGTGATCGCCCA CTGCGAGAGCGTGCGCGACTACGTGACCCGCGACGCGCTGATGGTGCTGCTGGAGGAAACCGAGAACGACCATGCGCACT GGCTGGAGCAACAGCTGAAGCTGATCGAGCTGATGGGCGTGGAAAACTACCAGCAGGCCCAGATGTAA
Upstream 100 bases:
>100_bases TGGCCTGGACGTTGTCCTTCGTTTTCTACCAGGGCGTGCATCTGCTGCGCTGAACGCCTAAAATGATGGTTTGCATCAGC CGGAAAGACAGGACAAGAAC
Downstream 100 bases:
>100_bases GCCGCGGCGTGAGCGCCGCCCCCAGGCATGCCCGGCTTCGGCCGGGCATTTTCTTTGGCGGCCATCGCCGCCATGTTTGA CCCCGCTCAGCGCGTCCGGG
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKGDPKTIALLNDLLAEELSAADQYFIHAEMYKDMGLSKLFERIDHEREDELEHARTLIARTLFLQGRPDVARRVPIKVG EDVPAMLKADLEVEYRVGALLKDVIAHCESVRDYVTRDALMVLLEETENDHAHWLEQQLKLIELMGVENYQQAQM
Sequences:
>Translated_155_residues MKGDPKTIALLNDLLAEELSAADQYFIHAEMYKDMGLSKLFERIDHEREDELEHARTLIARTLFLQGRPDVARRVPIKVG EDVPAMLKADLEVEYRVGALLKDVIAHCESVRDYVTRDALMVLLEETENDHAHWLEQQLKLIELMGVENYQQAQM >Mature_155_residues MKGDPKTIALLNDLLAEELSAADQYFIHAEMYKDMGLSKLFERIDHEREDELEHARTLIARTLFLQGRPDVARRVPIKVG EDVPAMLKADLEVEYRVGALLKDVIAHCESVRDYVTRDALMVLLEETENDHAHWLEQQLKLIELMGVENYQQAQM
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=155, Percent_Identity=45.1612903225806, Blast_Score=133, Evalue=5e-33,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 17889; Mature: 17889
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGDPKTIALLNDLLAEELSAADQYFIHAEMYKDMGLSKLFERIDHEREDELEHARTLIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHH RTLFLQGRPDVARRVPIKVGEDVPAMLKADLEVEYRVGALLKDVIAHCESVRDYVTRDAL HHHHHCCCCCHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVLLEETENDHAHWLEQQLKLIELMGVENYQQAQM HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MKGDPKTIALLNDLLAEELSAADQYFIHAEMYKDMGLSKLFERIDHEREDELEHARTLIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHH RTLFLQGRPDVARRVPIKVGEDVPAMLKADLEVEYRVGALLKDVIAHCESVRDYVTRDAL HHHHHCCCCCHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVLLEETENDHAHWLEQQLKLIELMGVENYQQAQM HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 1536655 [H]