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The map label for this gene is yfgL [H]

Identifier: 34498990

GI number: 34498990

Start: 3843360

End: 3844499

Strand: Reverse

Name: yfgL [H]

Synonym: CV_3535

Alternate gene names: 34498990

Gene position: 3844499-3843360 (Counterclockwise)

Preceding gene: 34498991

Following gene: 34498989

Centisome position: 80.92

GC content: 69.12

Gene sequence:

>1140_bases
ATGCGCCGCCATCTGTTGCTTACCGCCCTGACGTCCTCGCTGCTGCTGGCCGGCTGCGCCAGCTGGTTCGAGGGCTCCAC
CCAGTTCCAGCCGACCCCGCTGGCGGCGATCAAGCCGCTGCAGGCGCTGGACGTCAAATGGACGCTGCAGCAGGCCGCGC
CGGCCGCCAGCTTCCTGCCGGTCTACGCCAACGGCAATGTGGTGACCGCCGACGCCGACGGCCGCATCCGCAGCGTGGAC
GCGCTGTCCGGCCGCGTGCAGTCCGACGTGGCGCTGAAGCGCGGGCTGGCCAGCGGGGTGGCCGTCAGCGGCGACACCGT
GCTGGTCGGCAGCCAGGACGCCAAGCTGCTGGCCGTCAATCGCACCAGCGGCAAGATCCTGTGGGAACAGCCGCTGACCA
GCCTGATGCTGGAAGCGCCGCAGATCGCCGGCGACATCGTCGTGGTCCGCACCAACGACGCCCGCCTGACCGGCTTCAGC
CTGGCCGACGGCAAGCAGCAATGGTCGGTGGTGAACGTGCTGCCGCAGCTGACCGTGCGCAACAACGGCTCGATGCAGGC
GGTGGGCAAGGAGGCGGTGATGGTGGGGCAGGCCGGCGGCCGCGTCGACATCGTCAATCCGCTTACCGGCAACACCATCT
GGCAGGGCGCGGTGGCCACGCCGCGCGGCGCCACCGAGCTGGAGCGCGTCACCGACGTCACCAGCCGGCCGGCTTTCGAC
GGCGGCCAAGTGTGCGCGGTGGCCTACCAGGGCCGCGTCGCGTGCTTCGACGCCCGCAGCGGCAGCCTGCAATGGGGGCG
CGAAGTGTCCTCCAGCCGCGGCGTGGCGGTGGACGCCCGCAATGTCTACGTGACGGCGGAAGACGGATCGATCTGGGCGT
ATGATCGCCAGAGCGGCCGCAATGTATGGAAAAACGACGACCTCAAATACCGCGACGTTTCCGGTCCCGCGATGATCGGG
CGTTTCGTGCTGGTGGTGGACGGCGAGGGCTATGCCCATCTGCTGTCCAACGAGAGCGGAGGCATCGTCGGACGCAACAA
GATCGGCACCACCGGACCGGTCAATCAACCGGTGTCGCTCGGCTCCTCCGCCCTGGTACAGGGACGCGACGGCCGCCTGG
CGATGCTGAATCTGGGATAA

Upstream 100 bases:

>100_bases
GCGCGCGACGCCTACAAGGCCGCGCTGGCCAAGATGCAGGGCGAAAGCCCGAATCGCCAGCTGGTGCAAACCAAGCTCGA
CGCGCTGGGAGGCTGACCGC

Downstream 100 bases:

>100_bases
GCAGTTTTAGATGAAACCTACCGTAGCGCTGGTCGGCCGCCCCAATGTGGGCAAGTCGACCCTTTTCAATCGGCTGACCC
GCAGCCGCGACGCCTTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRRHLLLTALTSSLLLAGCASWFEGSTQFQPTPLAAIKPLQALDVKWTLQQAAPAASFLPVYANGNVVTADADGRIRSVD
ALSGRVQSDVALKRGLASGVAVSGDTVLVGSQDAKLLAVNRTSGKILWEQPLTSLMLEAPQIAGDIVVVRTNDARLTGFS
LADGKQQWSVVNVLPQLTVRNNGSMQAVGKEAVMVGQAGGRVDIVNPLTGNTIWQGAVATPRGATELERVTDVTSRPAFD
GGQVCAVAYQGRVACFDARSGSLQWGREVSSSRGVAVDARNVYVTAEDGSIWAYDRQSGRNVWKNDDLKYRDVSGPAMIG
RFVLVVDGEGYAHLLSNESGGIVGRNKIGTTGPVNQPVSLGSSALVQGRDGRLAMLNLG

Sequences:

>Translated_379_residues
MRRHLLLTALTSSLLLAGCASWFEGSTQFQPTPLAAIKPLQALDVKWTLQQAAPAASFLPVYANGNVVTADADGRIRSVD
ALSGRVQSDVALKRGLASGVAVSGDTVLVGSQDAKLLAVNRTSGKILWEQPLTSLMLEAPQIAGDIVVVRTNDARLTGFS
LADGKQQWSVVNVLPQLTVRNNGSMQAVGKEAVMVGQAGGRVDIVNPLTGNTIWQGAVATPRGATELERVTDVTSRPAFD
GGQVCAVAYQGRVACFDARSGSLQWGREVSSSRGVAVDARNVYVTAEDGSIWAYDRQSGRNVWKNDDLKYRDVSGPAMIG
RFVLVVDGEGYAHLLSNESGGIVGRNKIGTTGPVNQPVSLGSSALVQGRDGRLAMLNLG
>Mature_379_residues
MRRHLLLTALTSSLLLAGCASWFEGSTQFQPTPLAAIKPLQALDVKWTLQQAAPAASFLPVYANGNVVTADADGRIRSVD
ALSGRVQSDVALKRGLASGVAVSGDTVLVGSQDAKLLAVNRTSGKILWEQPLTSLMLEAPQIAGDIVVVRTNDARLTGFS
LADGKQQWSVVNVLPQLTVRNNGSMQAVGKEAVMVGQAGGRVDIVNPLTGNTIWQGAVATPRGATELERVTDVTSRPAFD
GGQVCAVAYQGRVACFDARSGSLQWGREVSSSRGVAVDARNVYVTAEDGSIWAYDRQSGRNVWKNDDLKYRDVSGPAMIG
RFVLVVDGEGYAHLLSNESGGIVGRNKIGTTGPVNQPVSLGSSALVQGRDGRLAMLNLG

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=374, Percent_Identity=28.8770053475936, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 39954; Mature: 39954

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHLLLTALTSSLLLAGCASWFEGSTQFQPTPLAAIKPLQALDVKWTLQQAAPAASFLP
CCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEHHHCCCCCCEEE
VYANGNVVTADADGRIRSVDALSGRVQSDVALKRGLASGVAVSGDTVLVGSQDAKLLAVN
EEECCCEEEECCCCCEEEEHHHCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCEEEEEE
RTSGKILWEQPLTSLMLEAPQIAGDIVVVRTNDARLTGFSLADGKQQWSVVNVLPQLTVR
CCCCCEEECCCHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCHHEEHEECCCCEEEE
NNGSMQAVGKEAVMVGQAGGRVDIVNPLTGNTIWQGAVATPRGATELERVTDVTSRPAFD
CCCCEEECCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCC
GGQVCAVAYQGRVACFDARSGSLQWGREVSSSRGVAVDARNVYVTAEDGSIWAYDRQSGR
CCCEEEEEECCEEEEEECCCCCCCCCHHCCCCCCEEEECCEEEEEECCCCEEEEECCCCC
NVWKNDDLKYRDVSGPAMIGRFVLVVDGEGYAHLLSNESGGIVGRNKIGTTGPVNQPVSL
CCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCC
GSSALVQGRDGRLAMLNLG
CCCEEEECCCCCEEEEECC
>Mature Secondary Structure
MRRHLLLTALTSSLLLAGCASWFEGSTQFQPTPLAAIKPLQALDVKWTLQQAAPAASFLP
CCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEHHHCCCCCCEEE
VYANGNVVTADADGRIRSVDALSGRVQSDVALKRGLASGVAVSGDTVLVGSQDAKLLAVN
EEECCCEEEECCCCCEEEEHHHCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCEEEEEE
RTSGKILWEQPLTSLMLEAPQIAGDIVVVRTNDARLTGFSLADGKQQWSVVNVLPQLTVR
CCCCCEEECCCHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCHHEEHEECCCCEEEE
NNGSMQAVGKEAVMVGQAGGRVDIVNPLTGNTIWQGAVATPRGATELERVTDVTSRPAFD
CCCCEEECCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCC
GGQVCAVAYQGRVACFDARSGSLQWGREVSSSRGVAVDARNVYVTAEDGSIWAYDRQSGR
CCCEEEEEECCEEEEEECCCCCCCCCHHCCCCCCEEEECCEEEEEECCCCEEEEECCCCC
NVWKNDDLKYRDVSGPAMIGRFVLVVDGEGYAHLLSNESGGIVGRNKIGTTGPVNQPVSL
CCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCC
GSSALVQGRDGRLAMLNLG
CCCEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]