| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is engA
Identifier: 34498989
GI number: 34498989
Start: 3841940
End: 3843349
Strand: Reverse
Name: engA
Synonym: CV_3534
Alternate gene names: 34498989
Gene position: 3843349-3841940 (Counterclockwise)
Preceding gene: 34498990
Following gene: 34498988
Centisome position: 80.89
GC content: 63.55
Gene sequence:
>1410_bases ATGAAACCTACCGTAGCGCTGGTCGGCCGCCCCAATGTGGGCAAGTCGACCCTTTTCAATCGGCTGACCCGCAGCCGCGA CGCCTTGGTCGCCGACCAGCCTGGTCTGACGCGTGACCGCCACTACGGCCAAGGCCGCGTTGGCGAGAAACCGTACCTGG TGGTCGACACCGGCGGCTTCGAGCCGGTGGTGGACGAAGGCATCCTGTTCGAGATGGCCAAGCAGACGCTGCAGGCCGTC GACGAAGCGGATGCCGTGGTCTTCCTGGTGGATGGCCGCGCCGGCCTGACGCCGCAGGACAAGATCATCGCCAACCGCCT GCGCCAGCTGGACCGCCCGGTGTTCCTGGCCGTCAACAAGGCCGAGGGCATGAAGCACGCGATCGCCGGCGCCGAGTTCC ACGAACTGGCGCTGGGCGAGCCGCTGGTGATCTCCGCCGCCCACGGCGACGGCGTGCGCGAGCTGATGGAGCTGGTGCTG GAAGGCTTCCCCGACGAAGTCGAGGAAGAGGACAGCCGCCATCCGAAGTTCGCGGTGATCGGCCGTCCCAACGTTGGCAA GTCCACGCTGGTCAACGCCATCCTCGGCGAAGAGCGGGTGATCGCCTTCGATCAGGCCGGAACCACGCGCGACAGCATCT ATATTGATTTTGAGCGCGAAGGCCATACCTATACCATCATCGACACCGCCGGCGTGCGCCGCCGCGCCAAGGTCAACGAG ATGCTGGAGAAATTCTCCGTCATCAAGACCATGAAGGCGATCGAGGACGCCAACGTCGCGGTGCTGGTGCTGGACGCGCA GCTGGACATCTCCGAGCAGGACGCCACCATCGCCGGTTTCGCGCTGGAAGCGGGCCGCGCCTTGGTGGTGGCGGTCAACA AGTGGGACAATCTCGACGGCGAGCAGAAGGAAAACGTGCGCCGCGAGATCGCCCGCAAGCTGAACTTCCTGGATTTCGCA AAGTTTCATTACATCTCGGCCATCGAGGGCCGCGGTGTGGCAGACTTGTTCAAGTCCATCGACGAAGCCTACCGCGCGGC GATGAGCAAGCTGGCGACGCCGAAGCTCACCCGCGTGCTGCAGGTGGCGCTGGAGCGCCAGCAGCCGCCGCGCTCGGGCC TGATCCGTCCCAAGATGCGCTATGCGCACCAGGGCGGCCAGAACCCGCCGGTGATCGTCGTGCACGGCAATGCGCTGGAC AGCATTCCGGCCAGCTATACCCGCTATCTGGAACATACTTTCCGTAAAGTGTTCAAATTGCAGGGTACGCCGCTGAGAGT GCAGTACAAGTCGTCGGAAAACCCGTTCGACAACGACGAAAAGGACAAGCCGCGGGCCAAGCCCAAGCCGATGTCCAAGA TGCGGGGCAGGGAAAAGGAAGTTCGCTACGGCAAAAACAGCAAGAAATAG
Upstream 100 bases:
>100_bases ACCGGACCGGTCAATCAACCGGTGTCGCTCGGCTCCTCCGCCCTGGTACAGGGACGCGACGGCCGCCTGGCGATGCTGAA TCTGGGATAAGCAGTTTTAG
Downstream 100 bases:
>100_bases TACGGCGGAATGTTTTCTGCTAAAAATAAGCAGGCCGCCGCGCTGTTTGCTGGACTTAATACAACAATCAACGATTCGGA GAAAAACGAATGAGCTCTAA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGQGRVGEKPYLVVDTGGFEPVVDEGILFEMAKQTLQAV DEADAVVFLVDGRAGLTPQDKIIANRLRQLDRPVFLAVNKAEGMKHAIAGAEFHELALGEPLVISAAHGDGVRELMELVL EGFPDEVEEEDSRHPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFEREGHTYTIIDTAGVRRRAKVNE MLEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVAVNKWDNLDGEQKENVRREIARKLNFLDFA KFHYISAIEGRGVADLFKSIDEAYRAAMSKLATPKLTRVLQVALERQQPPRSGLIRPKMRYAHQGGQNPPVIVVHGNALD SIPASYTRYLEHTFRKVFKLQGTPLRVQYKSSENPFDNDEKDKPRAKPKPMSKMRGREKEVRYGKNSKK
Sequences:
>Translated_469_residues MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGQGRVGEKPYLVVDTGGFEPVVDEGILFEMAKQTLQAV DEADAVVFLVDGRAGLTPQDKIIANRLRQLDRPVFLAVNKAEGMKHAIAGAEFHELALGEPLVISAAHGDGVRELMELVL EGFPDEVEEEDSRHPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFEREGHTYTIIDTAGVRRRAKVNE MLEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVAVNKWDNLDGEQKENVRREIARKLNFLDFA KFHYISAIEGRGVADLFKSIDEAYRAAMSKLATPKLTRVLQVALERQQPPRSGLIRPKMRYAHQGGQNPPVIVVHGNALD SIPASYTRYLEHTFRKVFKLQGTPLRVQYKSSENPFDNDEKDKPRAKPKPMSKMRGREKEVRYGKNSKK >Mature_469_residues MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGQGRVGEKPYLVVDTGGFEPVVDEGILFEMAKQTLQAV DEADAVVFLVDGRAGLTPQDKIIANRLRQLDRPVFLAVNKAEGMKHAIAGAEFHELALGEPLVISAAHGDGVRELMELVL EGFPDEVEEEDSRHPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFEREGHTYTIIDTAGVRRRAKVNE MLEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVAVNKWDNLDGEQKENVRREIARKLNFLDFA KFHYISAIEGRGVADLFKSIDEAYRAAMSKLATPKLTRVLQVALERQQPPRSGLIRPKMRYAHQGGQNPPVIVVHGNALD SIPASYTRYLEHTFRKVFKLQGTPLRVQYKSSENPFDNDEKDKPRAKPKPMSKMRGREKEVRYGKNSKK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=497, Percent_Identity=48.4909456740443, Blast_Score=469, Evalue=1e-133, Organism=Escherichia coli, GI1788919, Length=121, Percent_Identity=35.5371900826446, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI2367268, Length=90, Percent_Identity=37.7777777777778, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_CHRVO (Q7NS92)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903204.1 - ProteinModelPortal: Q7NS92 - SMR: Q7NS92 - GeneID: 2547575 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3534 - NMPDR: fig|243365.1.peg.3534 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q7NS92 - ProtClustDB: PRK00093 - BioCyc: CVIO243365:CV_3534-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 52245; Mature: 52245
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGQGRVGEKPYLVVDTGGF CCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVVDEGILFEMAKQTLQAVDEADAVVFLVDGRAGLTPQDKIIANRLRQLDRPVFLAVNK CHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEC AEGMKHAIAGAEFHELALGEPLVISAAHGDGVRELMELVLEGFPDEVEEEDSRHPKFAVI CCCHHHHHCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE GRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFEREGHTYTIIDTAGVRRRAKVNE ECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHH MLEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVAVNKWDNLDG HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCC EQKENVRREIARKLNFLDFAKFHYISAIEGRGVADLFKSIDEAYRAAMSKLATPKLTRVL HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH QVALERQQPPRSGLIRPKMRYAHQGGQNPPVIVVHGNALDSIPASYTRYLEHTFRKVFKL HHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC QGTPLRVQYKSSENPFDNDEKDKPRAKPKPMSKMRGREKEVRYGKNSKK CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCC >Mature Secondary Structure MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGQGRVGEKPYLVVDTGGF CCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVVDEGILFEMAKQTLQAVDEADAVVFLVDGRAGLTPQDKIIANRLRQLDRPVFLAVNK CHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEC AEGMKHAIAGAEFHELALGEPLVISAAHGDGVRELMELVLEGFPDEVEEEDSRHPKFAVI CCCHHHHHCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE GRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFEREGHTYTIIDTAGVRRRAKVNE ECCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHH MLEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVAVNKWDNLDG HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCC EQKENVRREIARKLNFLDFAKFHYISAIEGRGVADLFKSIDEAYRAAMSKLATPKLTRVL HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH QVALERQQPPRSGLIRPKMRYAHQGGQNPPVIVVHGNALDSIPASYTRYLEHTFRKVFKL HHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC QGTPLRVQYKSSENPFDNDEKDKPRAKPKPMSKMRGREKEVRYGKNSKK CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782