| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498976
Identifier: 34498976
GI number: 34498976
Start: 3818337
End: 3818852
Strand: Direct
Name: 34498976
Synonym: CV_3521
Alternate gene names: NA
Gene position: 3818337-3818852 (Clockwise)
Preceding gene: 34498974
Following gene: 34498981
Centisome position: 80.37
GC content: 56.59
Gene sequence:
>516_bases ATGCGGACCATCGGCAATATGAAGCAGATACTGCAACGCAACATTCATTCCTGCCTGGAAGGCCAGTTTTCCACTCGGAT CTCGCTCGCAGCGACAGCGCAAGGCGAGATTGACGCGCCACCGCCTCTCCCACCATCATTGCATGCGCATTTTCACTTTT TGACACCGCAATCTTCAGGCAAGGACCCGTTTATGAACGCCGCCAAGAAAATTCGCCGCTTCATCGAGGAAGGGCATGAT CCGCAGCAGATGCAGGTATTGAAGGAGCTGGCTGCAGCACTGGAAATGGGCCGCTCCTTCGACCTGAGCCTGCTGTACGA TATAGACATGCGCTATTTCGATGTCGCGATCGATCTGCTGAAAGACTGGCGCTTCGATCACCACATCAGTTCGCGCAGCA AACTGCTGGAGCAGCTGCTGACCGAAATCGCGCCGGACCAGAAAGCCGCAGTCAGCGCCGAAGACGTGGCCGATGCCACC CGGCAGGCGGACGCCGGCAAAAAGAAGAAGAGCTGA
Upstream 100 bases:
>100_bases TAAGGCCCCGGCGGAAAGGCAGGACTGGTCAAGGGCATCGCGAACGCGCGCTGGCGGACTTCCTGTTGCTTCATGGCTAA CTCCCTTCAAGCAGGATGGC
Downstream 100 bases:
>100_bases GACTTGCCGGTCAGCGCAGGCTGTCCGGCACCGGCTGCCAGCATTGCAGCATCGCGCTGCGCTTGCCCAGTTCCAACAAG GCCATCACCTGCCATGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRTIGNMKQILQRNIHSCLEGQFSTRISLAATAQGEIDAPPPLPPSLHAHFHFLTPQSSGKDPFMNAAKKIRRFIEEGHD PQQMQVLKELAAALEMGRSFDLSLLYDIDMRYFDVAIDLLKDWRFDHHISSRSKLLEQLLTEIAPDQKAAVSAEDVADAT RQADAGKKKKS
Sequences:
>Translated_171_residues MRTIGNMKQILQRNIHSCLEGQFSTRISLAATAQGEIDAPPPLPPSLHAHFHFLTPQSSGKDPFMNAAKKIRRFIEEGHD PQQMQVLKELAAALEMGRSFDLSLLYDIDMRYFDVAIDLLKDWRFDHHISSRSKLLEQLLTEIAPDQKAAVSAEDVADAT RQADAGKKKKS >Mature_171_residues MRTIGNMKQILQRNIHSCLEGQFSTRISLAATAQGEIDAPPPLPPSLHAHFHFLTPQSSGKDPFMNAAKKIRRFIEEGHD PQQMQVLKELAAALEMGRSFDLSLLYDIDMRYFDVAIDLLKDWRFDHHISSRSKLLEQLLTEIAPDQKAAVSAEDVADAT RQADAGKKKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19224; Mature: 19224
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIGNMKQILQRNIHSCLEGQFSTRISLAATAQGEIDAPPPLPPSLHAHFHFLTPQSSG CCCHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC KDPFMNAAKKIRRFIEEGHDPQQMQVLKELAAALEMGRSFDLSLLYDIDMRYFDVAIDLL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH KDWRFDHHISSRSKLLEQLLTEIAPDQKAAVSAEDVADATRQADAGKKKKS HHHCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRTIGNMKQILQRNIHSCLEGQFSTRISLAATAQGEIDAPPPLPPSLHAHFHFLTPQSSG CCCHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC KDPFMNAAKKIRRFIEEGHDPQQMQVLKELAAALEMGRSFDLSLLYDIDMRYFDVAIDLL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH KDWRFDHHISSRSKLLEQLLTEIAPDQKAAVSAEDVADATRQADAGKKKKS HHHCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA