Click here to switch to the map view.

The map label for this gene is pcp [H]

Identifier: 34498974

GI number: 34498974

Start: 3815605

End: 3817512

Strand: Direct

Name: pcp [H]

Synonym: CV_3519

Alternate gene names: 34498974

Gene position: 3815605-3817512 (Clockwise)

Preceding gene: 34498972

Following gene: 34498976

Centisome position: 80.31

GC content: 67.19

Gene sequence:

>1908_bases
ATGTTCAAGATGACAATGCTGGCAGCCGCCCTGTCCGCTATCGCCGCCTTCGGCGCGATGGCCGCCTCCGTCCAGGATCT
GGGCAAGGTGGAACAGGCCGCCCCGGCGCAAAAACTGACCGTGACCATCGCGCTGAGCCTGCGCGACCGCGATGCCGCCG
CCCGCTATCTGCAGGAAGTGCACACCCCGTCCAGCCCCAATTACCATAAGTTCCTGACGCCATCCGAGTTCCGCGCCCGT
TACGCCCCCACCGAAGCCAGCCTGGCCAAGGTGGCCGCCCGCCTCCAGGCCGCCGGCCTGAGCGTCAAGCGCATCGGCAG
CACCCTGCTGCAAGTCAGCGGCCCCGCCGCCACCGTGCAGAAAGCCTTCGGCGCCGAAGTGCACGTATTCCAGAACAAGT
CCGTCGTCCAAGGCGCCGCCGCGCGTTATACCGCTCCGGTGCGCGCCTCCACGCCAGGTATCGACCTGAGCGACGTGCAG
GCTGTGATCGGCCTGGACAGCCGCCCGCATTTCCGCCCGCATCTGCGCCAGCTGCCCAGCCATCTGCAGGCATCCATGGA
CAAGAGCGCCAGCGCCGTGACCAACGGCAACGCGCCGGGCAAGTGGACCGTCACCGACCTGGCCCGCCACTACAACATCA
CCCCGCTCTACAACAAGGGCATCCACGGCCAGGGCGCCACCATCGGCATCGTCACCCTGGCCAGCTTCACGCCATCCGAC
GCCTTCCAGTACTGGAGCTCGATCGGCCTGGCCACCGATCCGAACCGCCTCACCGTGGTCGACATCGACGGCGGCCCGGG
CGCGCCCAGCGACGACGGCGGTTCCAGCGAAACCACGCTGGACGTCGAACAGTCCGGCGGCATCGCCCCCGACGCCAAGA
TCATCGTCTACCAGGCGCCCAACACCACCCAGGGCTTTGTCGACGCTTTCGCCAAGGCCATCGAATCCAATGCCGCCGAC
ACGCTGTCGGTCAGCTGGGGCGAATGGGAATGGTTCGACCAGCAGAGCCAGGCGGTGAATCCGGTGAACGGCAAGAGCGC
CAATGTGCTGCAGACCTACCATGACCTGTTCCTGCAGGCCGCGCTGCAAGGCCAGACCATGTTCGCCGCCTCCGGCGACT
CCGGCGCCTACGACGTGAACCGCGCCGCGCCGCTGCCGCAGTACAACAAGGTGCTGTCGGTGGACAGCCCGGCCAACCAG
CAATTCATCACCGCCGCCGGCGCCACCACCGTGCCCACCACGCTGACCTTCCATCCCAACGGCAAGGAAATGAAGATCAA
GATCCCGACCGAGCGCGCCTGGGGCTGGGACTATCTGAACGGGCTGTGCAAGGCGCTGGGCAAGGATCCTGTGGCCTGCG
GCACCTTCCCGGTCGGCGACGGCGGCGGCGTCAGCAGCTTCATCGGCCGCCCCTTCTACCAGAACTGGCTGCCAGGCATG
CAGAACAGCCCGGCTGGCCAACAGTTGGTGGACAGCAGCCAGAATCCGCCGCAGGTGATCGCCACCCTGCCCGCCAACTT
CAAGGGCCGCAACGTGCCGGACATCTCGATGAACGGCGACCCGGAAACCGGCTACGTGGTGTACTACACCTCCAGCAAGA
CCGGCTTCTCGATCCAGACCAACAACGGCGGCACCAGCTTCGTCGCGCCGCAGTTGGCCGGCATCACCGCGCTGCTGAAC
CAGTCGCTGGGCGGCCGCCTGGGCCTGCTGAATTTCTCGCTGTACGGCCTGGTAGCCACCGGCCACGGCTATCAAGGTTT
CGGCCGCCACGGCGCGCCGCTGCGCGACATCACCGCCGGCAACAACTGGGGCTACAACGCTCACCGCGGCTACGACCAGG
CCACCGGCGTCGGCGCGCCGGACGTGGCCAACCTGGATGCCGCGCTGCGGCGCTACTTCTGGTTCTGA

Upstream 100 bases:

>100_bases
TGGTCAATCCAATTATTCCGATTGGATATCCGGATATTTAACCCGGACCGGAGCCGCCCCACAGAAACGCGGCCCGGAAT
CTACACAAGGAGCAAACAAT

Downstream 100 bases:

>100_bases
AGCGCGAACCGGCAATGAGAAACGGCCCCAAAGGGGCCGTTTTTCTCGCAGCCGCCGTTATTGCCGCAGGTAATCGAACA
CCACGGTTCCCAGATCCAGC

Product: aspartyl protease

Products: NA

Alternate protein names: Pepstatin-insensitive carboxyl proteinase; Pseudomonapepsin [H]

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MFKMTMLAAALSAIAAFGAMAASVQDLGKVEQAAPAQKLTVTIALSLRDRDAAARYLQEVHTPSSPNYHKFLTPSEFRAR
YAPTEASLAKVAARLQAAGLSVKRIGSTLLQVSGPAATVQKAFGAEVHVFQNKSVVQGAAARYTAPVRASTPGIDLSDVQ
AVIGLDSRPHFRPHLRQLPSHLQASMDKSASAVTNGNAPGKWTVTDLARHYNITPLYNKGIHGQGATIGIVTLASFTPSD
AFQYWSSIGLATDPNRLTVVDIDGGPGAPSDDGGSSETTLDVEQSGGIAPDAKIIVYQAPNTTQGFVDAFAKAIESNAAD
TLSVSWGEWEWFDQQSQAVNPVNGKSANVLQTYHDLFLQAALQGQTMFAASGDSGAYDVNRAAPLPQYNKVLSVDSPANQ
QFITAAGATTVPTTLTFHPNGKEMKIKIPTERAWGWDYLNGLCKALGKDPVACGTFPVGDGGGVSSFIGRPFYQNWLPGM
QNSPAGQQLVDSSQNPPQVIATLPANFKGRNVPDISMNGDPETGYVVYYTSSKTGFSIQTNNGGTSFVAPQLAGITALLN
QSLGGRLGLLNFSLYGLVATGHGYQGFGRHGAPLRDITAGNNWGYNAHRGYDQATGVGAPDVANLDAALRRYFWF

Sequences:

>Translated_635_residues
MFKMTMLAAALSAIAAFGAMAASVQDLGKVEQAAPAQKLTVTIALSLRDRDAAARYLQEVHTPSSPNYHKFLTPSEFRAR
YAPTEASLAKVAARLQAAGLSVKRIGSTLLQVSGPAATVQKAFGAEVHVFQNKSVVQGAAARYTAPVRASTPGIDLSDVQ
AVIGLDSRPHFRPHLRQLPSHLQASMDKSASAVTNGNAPGKWTVTDLARHYNITPLYNKGIHGQGATIGIVTLASFTPSD
AFQYWSSIGLATDPNRLTVVDIDGGPGAPSDDGGSSETTLDVEQSGGIAPDAKIIVYQAPNTTQGFVDAFAKAIESNAAD
TLSVSWGEWEWFDQQSQAVNPVNGKSANVLQTYHDLFLQAALQGQTMFAASGDSGAYDVNRAAPLPQYNKVLSVDSPANQ
QFITAAGATTVPTTLTFHPNGKEMKIKIPTERAWGWDYLNGLCKALGKDPVACGTFPVGDGGGVSSFIGRPFYQNWLPGM
QNSPAGQQLVDSSQNPPQVIATLPANFKGRNVPDISMNGDPETGYVVYYTSSKTGFSIQTNNGGTSFVAPQLAGITALLN
QSLGGRLGLLNFSLYGLVATGHGYQGFGRHGAPLRDITAGNNWGYNAHRGYDQATGVGAPDVANLDAALRRYFWF
>Mature_635_residues
MFKMTMLAAALSAIAAFGAMAASVQDLGKVEQAAPAQKLTVTIALSLRDRDAAARYLQEVHTPSSPNYHKFLTPSEFRAR
YAPTEASLAKVAARLQAAGLSVKRIGSTLLQVSGPAATVQKAFGAEVHVFQNKSVVQGAAARYTAPVRASTPGIDLSDVQ
AVIGLDSRPHFRPHLRQLPSHLQASMDKSASAVTNGNAPGKWTVTDLARHYNITPLYNKGIHGQGATIGIVTLASFTPSD
AFQYWSSIGLATDPNRLTVVDIDGGPGAPSDDGGSSETTLDVEQSGGIAPDAKIIVYQAPNTTQGFVDAFAKAIESNAAD
TLSVSWGEWEWFDQQSQAVNPVNGKSANVLQTYHDLFLQAALQGQTMFAASGDSGAYDVNRAAPLPQYNKVLSVDSPANQ
QFITAAGATTVPTTLTFHPNGKEMKIKIPTERAWGWDYLNGLCKALGKDPVACGTFPVGDGGGVSSFIGRPFYQNWLPGM
QNSPAGQQLVDSSQNPPQVIATLPANFKGRNVPDISMNGDPETGYVVYYTSSKTGFSIQTNNGGTSFVAPQLAGITALLN
QSLGGRLGLLNFSLYGLVATGHGYQGFGRHGAPLRDITAGNNWGYNAHRGYDQATGVGAPDVANLDAALRRYFWF

Specific function: Unknown

COG id: COG4934

COG function: function code O; Predicted protease

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015366
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR009020 [H]

Pfam domain/function: PF00082 Peptidase_S8; PF09286 Pro-kuma_activ [H]

EC number: =3.4.21.100 [H]

Molecular weight: Translated: 67214; Mature: 67214

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKMTMLAAALSAIAAFGAMAASVQDLGKVEQAAPAQKLTVTIALSLRDRDAAARYLQEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHH
HTPSSPNYHKFLTPSEFRARYAPTEASLAKVAARLQAAGLSVKRIGSTLLQVSGPAATVQ
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHH
KAFGAEVHVFQNKSVVQGAAARYTAPVRASTPGIDLSDVQAVIGLDSRPHFRPHLRQLPS
HHCCCEEEEECCCCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
HLQASMDKSASAVTNGNAPGKWTVTDLARHYNITPLYNKGIHGQGATIGIVTLASFTPSD
HHHHHHCCCCHHEECCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHH
AFQYWSSIGLATDPNRLTVVDIDGGPGAPSDDGGSSETTLDVEQSGGIAPDAKIIVYQAP
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHCCCCCCCCEEEEEECC
NTTQGFVDAFAKAIESNAADTLSVSWGEWEWFDQQSQAVNPVNGKSANVLQTYHDLFLQA
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHH
ALQGQTMFAASGDSGAYDVNRAAPLPQYNKVLSVDSPANQQFITAAGATTVPTTLTFHPN
HHCCCEEEEECCCCCCEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEECCC
GKEMKIKIPTERAWGWDYLNGLCKALGKDPVACGTFPVGDGGGVSSFIGRPFYQNWLPGM
CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCCHHHHHCCCC
QNSPAGQQLVDSSQNPPQVIATLPANFKGRNVPDISMNGDPETGYVVYYTSSKTGFSIQT
CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE
NNGGTSFVAPQLAGITALLNQSLGGRLGLLNFSLYGLVATGHGYQGFGRHGAPLRDITAG
CCCCCEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEECCC
NNWGYNAHRGYDQATGVGAPDVANLDAALRRYFWF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKMTMLAAALSAIAAFGAMAASVQDLGKVEQAAPAQKLTVTIALSLRDRDAAARYLQEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHH
HTPSSPNYHKFLTPSEFRARYAPTEASLAKVAARLQAAGLSVKRIGSTLLQVSGPAATVQ
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHH
KAFGAEVHVFQNKSVVQGAAARYTAPVRASTPGIDLSDVQAVIGLDSRPHFRPHLRQLPS
HHCCCEEEEECCCCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
HLQASMDKSASAVTNGNAPGKWTVTDLARHYNITPLYNKGIHGQGATIGIVTLASFTPSD
HHHHHHCCCCHHEECCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHH
AFQYWSSIGLATDPNRLTVVDIDGGPGAPSDDGGSSETTLDVEQSGGIAPDAKIIVYQAP
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHCCCCCCCCEEEEEECC
NTTQGFVDAFAKAIESNAADTLSVSWGEWEWFDQQSQAVNPVNGKSANVLQTYHDLFLQA
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHH
ALQGQTMFAASGDSGAYDVNRAAPLPQYNKVLSVDSPANQQFITAAGATTVPTTLTFHPN
HHCCCEEEEECCCCCCEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEECCC
GKEMKIKIPTERAWGWDYLNGLCKALGKDPVACGTFPVGDGGGVSSFIGRPFYQNWLPGM
CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCCHHHHHCCCC
QNSPAGQQLVDSSQNPPQVIATLPANFKGRNVPDISMNGDPETGYVVYYTSSKTGFSIQT
CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE
NNGGTSFVAPQLAGITALLNQSLGGRLGLLNFSLYGLVATGHGYQGFGRHGAPLRDITAG
CCCCCEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEECCC
NNWGYNAHRGYDQATGVGAPDVANLDAALRRYFWF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929375; 8576087; 10488127; 11747435; 11323721 [H]