| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is adc
Identifier: 34498975
GI number: 34498975
Start: 3817570
End: 3818310
Strand: Reverse
Name: adc
Synonym: CV_3520
Alternate gene names: 34498975
Gene position: 3818310-3817570 (Counterclockwise)
Preceding gene: 34498977
Following gene: 34498973
Centisome position: 80.37
GC content: 63.56
Gene sequence:
>741_bases ATGAAGCAACAGGAAGTCCGCCAGCGCGCGTTCGCGATGCCCTTGACCAGTCCTGCCTTTCCGCCGGGGCCTTATCGTTT CGTCAACCGCGAATACATGATCATCACCTACCGCACCGATCCCGCCGCGATCGAAGCGGTCTTGCCTGAGCCGCTGCAGA TGGCGGAGCCGGTGGTCCGGTATGAGTTCATCCGCATGCCGGATTCGACCGGATTTGGCGATTACTCGGAAAGCGGGCAG GTGATTCCCGTGACGTTCCGCGGCGAGCGCGGCAGCTATACCCTGGCGATGTTTCTGGACGATCAGCCGCCGTTGGCAGG CGGGCGCGAGTTGTGGGGCTTCCCGAAAAAGGCGGGCAAGCCCAGGCTGGAGGTGCATCAGGACACCCTGGTGGGAAGCC TGGATTTCGGCCCGGTCCGCATCGCCACCGGCACCATGGGCTACAAGTACGAAGCGCTGGATCGTTCAGCCTTGCTGGCC AGCCTGGCCGAACCCAATTTCCTGCTGAAGATCATCCCGCATGTGGACGGCTCGCCGCGCATCTGCGAGTTGGTGCGCTA CCATACCACCGATGTCGCGATCAAAGGCGCGTGGAGCGCGCCGGGGTCGCTGGAGCTGCATCCGCACGCGCTGGCGCCGG TTGCGGCCTTGCCGGTGCTGGAAGTGCTGTCGGCGCGGCATTTCGTCTGCGATCTGACGCTGGATCTGGGAACCGTGGTG TTCGATTACCTGCGGCAATAA
Upstream 100 bases:
>100_bases GTGGAAAACTGGCCTTCCAGGCAGGAATGAATGTTGCGTTGCAGTATCTGCTTCATATTGCCGATGGTCCGCATGCCATC CTGCTTGAAGGGAGTTAGCC
Downstream 100 bases:
>100_bases CGGCGGCTGCGAGAAAAACGGCCCCTTTGGGGCCGTTTCTCATTGCCGGTTCGCGCTTCAGAACCAGAAGTAGCGCCGCA GCGCGGCATCCAGGTTGGCC
Product: acetoacetate decarboxylase
Products: NA
Alternate protein names: AAD; ADC
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKQQEVRQRAFAMPLTSPAFPPGPYRFVNREYMIITYRTDPAAIEAVLPEPLQMAEPVVRYEFIRMPDSTGFGDYSESGQ VIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGPVRIATGTMGYKYEALDRSALLA SLAEPNFLLKIIPHVDGSPRICELVRYHTTDVAIKGAWSAPGSLELHPHALAPVAALPVLEVLSARHFVCDLTLDLGTVV FDYLRQ
Sequences:
>Translated_246_residues MKQQEVRQRAFAMPLTSPAFPPGPYRFVNREYMIITYRTDPAAIEAVLPEPLQMAEPVVRYEFIRMPDSTGFGDYSESGQ VIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGPVRIATGTMGYKYEALDRSALLA SLAEPNFLLKIIPHVDGSPRICELVRYHTTDVAIKGAWSAPGSLELHPHALAPVAALPVLEVLSARHFVCDLTLDLGTVV FDYLRQ >Mature_246_residues MKQQEVRQRAFAMPLTSPAFPPGPYRFVNREYMIITYRTDPAAIEAVLPEPLQMAEPVVRYEFIRMPDSTGFGDYSESGQ VIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGPVRIATGTMGYKYEALDRSALLA SLAEPNFLLKIIPHVDGSPRICELVRYHTTDVAIKGAWSAPGSLELHPHALAPVAALPVLEVLSARHFVCDLTLDLGTVV FDYLRQ
Specific function: Catalyzes the conversion of acetoacetate to acetone and carbon dioxide
COG id: COG4689
COG function: function code Q; Acetoacetate decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADC family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ADC_CHRVO (Q7NSA6)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903190.1 - PDB: 3BGT - PDB: 3BH3 - PDBsum: 3BGT - PDBsum: 3BH3 - ProteinModelPortal: Q7NSA6 - SMR: Q7NSA6 - GeneID: 2548254 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3520 - NMPDR: fig|243365.1.peg.3520 - HOGENOM: HBG294597 - OMA: MGYKHRP - ProtClustDB: PRK02265 - BioCyc: CVIO243365:CV_3520-MONOMER - BRENDA: 4.1.1.4 - HAMAP: MF_00597 - InterPro: IPR010451
Pfam domain/function: PF06314 ADC
EC number: =4.1.1.4
Molecular weight: Translated: 27300; Mature: 27300
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: ACT_SITE 116-116
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQEVRQRAFAMPLTSPAFPPGPYRFVNREYMIITYRTDPAAIEAVLPEPLQMAEPVVR CCHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHHHCCCCHHHHCHHHE YEFIRMPDSTGFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGK EEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHCCCCHHCCC PRLEVHQDTLVGSLDFGPVRIATGTMGYKYEALDRSALLASLAEPNFLLKIIPHVDGSPR CCEEEECCCEEECCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCHH ICELVRYHTTDVAIKGAWSAPGSLELHPHALAPVAALPVLEVLSARHFVCDLTLDLGTVV HHHHHHHCCCCEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH FDYLRQ HHHHCC >Mature Secondary Structure MKQQEVRQRAFAMPLTSPAFPPGPYRFVNREYMIITYRTDPAAIEAVLPEPLQMAEPVVR CCHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEECCCCHHHHHHCCCCHHHHCHHHE YEFIRMPDSTGFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGK EEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHCCCCHHCCC PRLEVHQDTLVGSLDFGPVRIATGTMGYKYEALDRSALLASLAEPNFLLKIIPHVDGSPR CCEEEECCCEEECCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCHH ICELVRYHTTDVAIKGAWSAPGSLELHPHALAPVAALPVLEVLSARHFVCDLTLDLGTVV HHHHHHHCCCCEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH FDYLRQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782