| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498938
Identifier: 34498938
GI number: 34498938
Start: 3778932
End: 3779402
Strand: Direct
Name: 34498938
Synonym: CV_3483
Alternate gene names: NA
Gene position: 3778932-3779402 (Clockwise)
Preceding gene: 34498935
Following gene: 34498939
Centisome position: 79.54
GC content: 71.13
Gene sequence:
>471_bases ATGCATACCCATCATTCCGCCGCACAGCCGCTCACGAAGTACGGGCTGAGCGCGCTGGCGCTGCTGGCCGGCGCGCTGCT CGCGCTGATGATCCATTGCAACAGCCGGCTGGCCGCATACGGCAATCCGCTGACCGCGTCATGGCTGGCCCACGCGATAG GCATGCTGGCCGCGCTGCTGCTGTGGAAGACCCAGCGGCGCGCGCGCCCCGGCATCGACCGCCCGCCGCGCTGGGCCTAT CTGGGCGGCGTGCCCGGCGCGCTGGTGGTGGCGCTGGCGGCCATCACCGTCAACAGCCCGCTGGCGATGTCCGGCACCCT CGCGCTGGGCATGGCCGGACAAATGCTGTTCGGCCTGCTGTCCGACCGCTTCGGCCTGTTCGGCATGCCGCGCCGGCCGC TTCGCCTGAACGACGCCTTGGCGCTGCCGCTGGTGCTCTCCGGCTGCGCGGTCCTGATTTTCGGAGCCTGA
Upstream 100 bases:
>100_bases GCAATCAGTTTCCAAAAATACAGATTATCAGCCAGAAAGACACAATGTACAGTTCTGACATCCGGCCTCGCCGTGTTCAT TCAAGACCTAAAGGATTTCC
Downstream 100 bases:
>100_bases CCATGCTGTTTTTCATGACTTTGGCCATCGCCAACGGGCTGTGCATAGGCGGCAGCCGCTCCATCAACGGCAAGCTGGCG CAACATGACGGCGCCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MHTHHSAAQPLTKYGLSALALLAGALLALMIHCNSRLAAYGNPLTASWLAHAIGMLAALLLWKTQRRARPGIDRPPRWAY LGGVPGALVVALAAITVNSPLAMSGTLALGMAGQMLFGLLSDRFGLFGMPRRPLRLNDALALPLVLSGCAVLIFGA
Sequences:
>Translated_156_residues MHTHHSAAQPLTKYGLSALALLAGALLALMIHCNSRLAAYGNPLTASWLAHAIGMLAALLLWKTQRRARPGIDRPPRWAY LGGVPGALVVALAAITVNSPLAMSGTLALGMAGQMLFGLLSDRFGLFGMPRRPLRLNDALALPLVLSGCAVLIFGA >Mature_156_residues MHTHHSAAQPLTKYGLSALALLAGALLALMIHCNSRLAAYGNPLTASWLAHAIGMLAALLLWKTQRRARPGIDRPPRWAY LGGVPGALVVALAAITVNSPLAMSGTLALGMAGQMLFGLLSDRFGLFGMPRRPLRLNDALALPLVLSGCAVLIFGA
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16358; Mature: 16358
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTHHSAAQPLTKYGLSALALLAGALLALMIHCNSRLAAYGNPLTASWLAHAIGMLAALL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH LWKTQRRARPGIDRPPRWAYLGGVPGALVVALAAITVNSPLAMSGTLALGMAGQMLFGLL HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH SDRFGLFGMPRRPLRLNDALALPLVLSGCAVLIFGA HHHCCCCCCCCCCCCCCHHHHHHHHHHCHHHEEECC >Mature Secondary Structure MHTHHSAAQPLTKYGLSALALLAGALLALMIHCNSRLAAYGNPLTASWLAHAIGMLAALL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH LWKTQRRARPGIDRPPRWAYLGGVPGALVVALAAITVNSPLAMSGTLALGMAGQMLFGLL HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH SDRFGLFGMPRRPLRLNDALALPLVLSGCAVLIFGA HHHCCCCCCCCCCCCCCHHHHHHHHHHCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA