| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mgtC [H]
Identifier: 34498932
GI number: 34498932
Start: 3771567
End: 3772295
Strand: Reverse
Name: mgtC [H]
Synonym: CV_3477
Alternate gene names: 34498932
Gene position: 3772295-3771567 (Counterclockwise)
Preceding gene: 34498933
Following gene: 34498931
Centisome position: 79.4
GC content: 66.53
Gene sequence:
>729_bases ATGCATTACAACCTGCACAATATGTTCGAGCTGGATTGGTTCGGCCTGCTGCATTCGCTGATCTGCCTGGCGATGGCCTT CGCCTGCGGCACCGTGATCGGGCTGGAGCGGCAGTACCGCCAGCGCACCGCCGGCTTGCGCACCAACGCCCTGGTGGCGG TGAGCGCGGCGGCCTTCGTCAATATGGCCTTGCAGCTGGACGGCTCAGGCAGCGCGTCGCGGGTGGTGGCTTACGTGGTG TCCGGCGTGGGTTTTCTCGGTGCCGGCACCATCATGAAGGAGGGCTTGAACGTGCGCGGCCTGAACACCGCCGCCACGCT GTGGGGCTCGGCGGCCACCGGCGCCTGCGCCGGCGCCGGCATGCTGGGCCAGGCCATCCTGACCACCGTGTTCGTGCTGG CGGTGAACACGCTGCTGCGGCCGGTGGTCAACTCCATCAACCGCCGCCCGATAGACGACGACGCCAGCGAAGTCACTTAC CAGCTGTGCGTGATCGCCACCCGCGAGGAGCAGAAGCAGGCGCTGGCCCAGGTGGGGCAATTGCTGGAGAAGGCCAATTA CCCGGTGGGGGATCTGGATGTCGAGGCCTTCGGCGACGACGAGGTGGAGATGACCGCCACGCTGCTGGCCACCTCGGTGG ATTCGGACGAACTGGACCGCATCGCCGCCGAGCTGGCGGCCAAGCCCTATATCAGCCAGGCATACTGGAACACCAGCACC AGCGAGTGA
Upstream 100 bases:
>100_bases TGGCGCCGGCTTTTGCCATATTAGGGACCGGTGCATGGTGGCTTTCGCGGAAAACCACCATGCATGTTCCTTATAAGAAA CCGGATAACAAGGAGGACGC
Downstream 100 bases:
>100_bases GCGCAAGTCTTTCCGGCATCCGCCGCCGCGGCCTTTAGGCGCCGGCGGCTTTTTTGCGTCCGATGCCGGGCGGGATAGCC GGCCGCGCGCCTTGTCCGGG
Product: Mg2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MHYNLHNMFELDWFGLLHSLICLAMAFACGTVIGLERQYRQRTAGLRTNALVAVSAAAFVNMALQLDGSGSASRVVAYVV SGVGFLGAGTIMKEGLNVRGLNTAATLWGSAATGACAGAGMLGQAILTTVFVLAVNTLLRPVVNSINRRPIDDDASEVTY QLCVIATREEQKQALAQVGQLLEKANYPVGDLDVEAFGDDEVEMTATLLATSVDSDELDRIAAELAAKPYISQAYWNTST SE
Sequences:
>Translated_242_residues MHYNLHNMFELDWFGLLHSLICLAMAFACGTVIGLERQYRQRTAGLRTNALVAVSAAAFVNMALQLDGSGSASRVVAYVV SGVGFLGAGTIMKEGLNVRGLNTAATLWGSAATGACAGAGMLGQAILTTVFVLAVNTLLRPVVNSINRRPIDDDASEVTY QLCVIATREEQKQALAQVGQLLEKANYPVGDLDVEAFGDDEVEMTATLLATSVDSDELDRIAAELAAKPYISQAYWNTST SE >Mature_242_residues MHYNLHNMFELDWFGLLHSLICLAMAFACGTVIGLERQYRQRTAGLRTNALVAVSAAAFVNMALQLDGSGSASRVVAYVV SGVGFLGAGTIMKEGLNVRGLNTAATLWGSAATGACAGAGMLGQAILTTVFVLAVNTLLRPVVNSINRRPIDDDASEVTY QLCVIATREEQKQALAQVGQLLEKANYPVGDLDVEAFGDDEVEMTATLLATSVDSDELDRIAAELAAKPYISQAYWNTST SE
Specific function: Virulence factor required for growth in low Mg(2+) medium and for intramacrophage survival. May be involved in regulating membrane potential by activating Na(+)/K(+)-ATPase [H]
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=118, Percent_Identity=44.0677966101695, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 25755; Mature: 25755
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYNLHNMFELDWFGLLHSLICLAMAFACGTVIGLERQYRQRTAGLRTNALVAVSAAAFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH NMALQLDGSGSASRVVAYVVSGVGFLGAGTIMKEGLNVRGLNTAATLWGSAATGACAGAG HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHH MLGQAILTTVFVLAVNTLLRPVVNSINRRPIDDDASEVTYQLCVIATREEQKQALAQVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHH LLEKANYPVGDLDVEAFGDDEVEMTATLLATSVDSDELDRIAAELAAKPYISQAYWNTST HHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCC SE CC >Mature Secondary Structure MHYNLHNMFELDWFGLLHSLICLAMAFACGTVIGLERQYRQRTAGLRTNALVAVSAAAFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH NMALQLDGSGSASRVVAYVVSGVGFLGAGTIMKEGLNVRGLNTAATLWGSAATGACAGAG HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHH MLGQAILTTVFVLAVNTLLRPVVNSINRRPIDDDASEVTYQLCVIATREEQKQALAQVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHH LLEKANYPVGDLDVEAFGDDEVEMTATLLATSVDSDELDRIAAELAAKPYISQAYWNTST HHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCC SE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA