| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498929
Identifier: 34498929
GI number: 34498929
Start: 3766899
End: 3767669
Strand: Reverse
Name: 34498929
Synonym: CV_3474
Alternate gene names: NA
Gene position: 3767669-3766899 (Counterclockwise)
Preceding gene: 34498931
Following gene: 34498925
Centisome position: 79.3
GC content: 65.76
Gene sequence:
>771_bases ATGGAACTCGGTTCCGTCGCTACCTTCAGTTTGTATCCGGACTTGTACGCCCGCTTCCGCCCGTCGTATCCGGAGGAGCT GTACGATTGGCTGCTGCCGCTGTGCCCGGGGCGGCAGCGCGCCTGGGACTGCGCCACCGGCAGCGGCCAGACCGCGGTGA GGCTGGGGGAGAGTTTTTCCCGCGTCGACGCCACCGACATCAGCTCGTCGCAATTGTCGGCGGCCGAGCCGCACACCCAG GTGTATTACCGCGAGTGTCCGGCCGAGGTGACGCCGTTCGACGACGACTGCTTCGACCTGATCTGCGTGTCGCAGGCGCT GCACTGGTTCCATCTGCCGTCGTTCTGGCCGGAGATGCAAAGGGTGCTGAAGCCGGGCGGCATCTTCGCCGCCTGGGGGT ATCACCATTGCGTGGTATCGCCGGAAGTGGACCGCGCCTGCAGCGTGCTGTGGTCCATCATCGAGCCGTTCTGGTCCAGC CGTTGCCAACTGCTGTGGGACGATTTCCGCGGCAGCGGCTGTCCGCTGCCCCTGTTGAAGGCGCCCAGCTTCACCATCAG CAGCGACTGGGCGCTGGATCACTTCCTGGGCTTTTTGAACACCACCTCGGCCAGCAAGCTGTGCAAGCAGGCGCTGGGCG AGAGCATCCTGGACGATGCCTGTCAGCGCATCACCCGGGCATGGGGGCCGAGAAACCAGGTGCGGCGCGTGGATCTGCCG CTGCACCTGATGGTGGCGCGCAAGGACGATGCGGGAGGATACGCCGGCTGA
Upstream 100 bases:
>100_bases CATATTTTCATTTTTTATCTTGCAAATCTTTTACTTACGGCATAAATACTGAAAATGTTCACGGCATGGTTCTAGTGTTT CTACTTAGCGAGTAATGAAT
Downstream 100 bases:
>100_bases GCGCCGCGGTGGGCAGAGAAAAAGCGCCCGCTTGCGGGCGCTTTTGGCTTCAGGAGGCGGGGTTCAGCGGCGGCGGTCGT ATTCCGCCTGCAGATCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MELGSVATFSLYPDLYARFRPSYPEELYDWLLPLCPGRQRAWDCATGSGQTAVRLGESFSRVDATDISSSQLSAAEPHTQ VYYRECPAEVTPFDDDCFDLICVSQALHWFHLPSFWPEMQRVLKPGGIFAAWGYHHCVVSPEVDRACSVLWSIIEPFWSS RCQLLWDDFRGSGCPLPLLKAPSFTISSDWALDHFLGFLNTTSASKLCKQALGESILDDACQRITRAWGPRNQVRRVDLP LHLMVARKDDAGGYAG
Sequences:
>Translated_256_residues MELGSVATFSLYPDLYARFRPSYPEELYDWLLPLCPGRQRAWDCATGSGQTAVRLGESFSRVDATDISSSQLSAAEPHTQ VYYRECPAEVTPFDDDCFDLICVSQALHWFHLPSFWPEMQRVLKPGGIFAAWGYHHCVVSPEVDRACSVLWSIIEPFWSS RCQLLWDDFRGSGCPLPLLKAPSFTISSDWALDHFLGFLNTTSASKLCKQALGESILDDACQRITRAWGPRNQVRRVDLP LHLMVARKDDAGGYAG >Mature_256_residues MELGSVATFSLYPDLYARFRPSYPEELYDWLLPLCPGRQRAWDCATGSGQTAVRLGESFSRVDATDISSSQLSAAEPHTQ VYYRECPAEVTPFDDDCFDLICVSQALHWFHLPSFWPEMQRVLKPGGIFAAWGYHHCVVSPEVDRACSVLWSIIEPFWSS RCQLLWDDFRGSGCPLPLLKAPSFTISSDWALDHFLGFLNTTSASKLCKQALGESILDDACQRITRAWGPRNQVRRVDLP LHLMVARKDDAGGYAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28787; Mature: 28787
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELGSVATFSLYPDLYARFRPSYPEELYDWLLPLCPGRQRAWDCATGSGQTAVRLGESFS CCCCCEEEEHHCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RVDATDISSSQLSAAEPHTQVYYRECPAEVTPFDDDCFDLICVSQALHWFHLPSFWPEMQ HCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH RVLKPGGIFAAWGYHHCVVSPEVDRACSVLWSIIEPFWSSRCQLLWDDFRGSGCPLPLLK HHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC APSFTISSDWALDHFLGFLNTTSASKLCKQALGESILDDACQRITRAWGPRNQVRRVDLP CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC LHLMVARKDDAGGYAG EEEEEEECCCCCCCCC >Mature Secondary Structure MELGSVATFSLYPDLYARFRPSYPEELYDWLLPLCPGRQRAWDCATGSGQTAVRLGESFS CCCCCEEEEHHCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RVDATDISSSQLSAAEPHTQVYYRECPAEVTPFDDDCFDLICVSQALHWFHLPSFWPEMQ HCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH RVLKPGGIFAAWGYHHCVVSPEVDRACSVLWSIIEPFWSSRCQLLWDDFRGSGCPLPLLK HHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC APSFTISSDWALDHFLGFLNTTSASKLCKQALGESILDDACQRITRAWGPRNQVRRVDLP CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC LHLMVARKDDAGGYAG EEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]