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The map label for this gene is betI [C]

Identifier: 34498880

GI number: 34498880

Start: 3717739

End: 3718389

Strand: Reverse

Name: betI [C]

Synonym: CV_3425

Alternate gene names: 34498880

Gene position: 3718389-3717739 (Counterclockwise)

Preceding gene: 34498881

Following gene: 34498878

Centisome position: 78.26

GC content: 64.82

Gene sequence:

>651_bases
ATGCAAACCAGACGAACACAGCAAAGCCGCAGGGAGTCCACCATAGGCAAACTGGTGGAGGCGGCGATCGAATGCCTGAT
GGAGAGCGGCTACCACGGCACCAGCGTGCAACTGATCTGCGGCCGCGCCGGCGTTTCGCAAGGCGCGCTGTTCCGCCATT
TCGCCACCAAGAACGAGCTGATGCAGCCGGTGGGGCGCAAGGTGGTGGACGACATCTTCGAGTCCGCGCTGGGCCTGGCC
GCCCAGCTTCCGCCCGGCATGTCGGAAGAGGAGCGCATCATCGCGCTGATGAAAGCGCTGGTGATGTCGCCGCGCCACAT
CGTGCTGCTGGAGCTGCTGATGGCGGCGCGCACCACGCCGGATTTGCGCGACATCTTCCTCGGCAGTTCCAGCACCTATT
TCCGCGACCGCTTCGTCGCGATGATGGCTTCGTTGTTCCCGCGCTACGCGATCTCCACCGGCTTCTTCGCCACCCTGCTC
ACCATGATGACCACCATGCACGGCATGGCGCTGTACCGCACACTGGCCGAGCACCCGGAGGGCGACAGGATGCGTGAGCA
ATGGCTGCTGTCCGCGCTGCGCGCCGAGCTGGAGCGGATACGGCAGGAAGGGGCGGATACCCGCAACCCGGTCTATCAGC
TGCCGTTCTGA

Upstream 100 bases:

>100_bases
GGCGTGTCTTGCTTGTTCTTAGAATGTGCCCGCCCTCGCTTGAACATGCGCTTTCGCGTATCATGCGCCGGGCTCGGGCC
GATAAATGATAAAACAATAG

Downstream 100 bases:

>100_bases
GTCTTTATTTTCTCGATTGAAAACCCCGTCGCTTGCGGCGGGGTTTTTGTTTATCTGGTGAGCTTGGGGCGGGTCGAAAG
CTGGGGCAGGACGGGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MQTRRTQQSRRESTIGKLVEAAIECLMESGYHGTSVQLICGRAGVSQGALFRHFATKNELMQPVGRKVVDDIFESALGLA
AQLPPGMSEEERIIALMKALVMSPRHIVLLELLMAARTTPDLRDIFLGSSSTYFRDRFVAMMASLFPRYAISTGFFATLL
TMMTTMHGMALYRTLAEHPEGDRMREQWLLSALRAELERIRQEGADTRNPVYQLPF

Sequences:

>Translated_216_residues
MQTRRTQQSRRESTIGKLVEAAIECLMESGYHGTSVQLICGRAGVSQGALFRHFATKNELMQPVGRKVVDDIFESALGLA
AQLPPGMSEEERIIALMKALVMSPRHIVLLELLMAARTTPDLRDIFLGSSSTYFRDRFVAMMASLFPRYAISTGFFATLL
TMMTTMHGMALYRTLAEHPEGDRMREQWLLSALRAELERIRQEGADTRNPVYQLPF
>Mature_216_residues
MQTRRTQQSRRESTIGKLVEAAIECLMESGYHGTSVQLICGRAGVSQGALFRHFATKNELMQPVGRKVVDDIFESALGLA
AQLPPGMSEEERIIALMKALVMSPRHIVLLELLMAARTTPDLRDIFLGSSSTYFRDRFVAMMASLFPRYAISTGFFATLL
TMMTTMHGMALYRTLAEHPEGDRMREQWLLSALRAELERIRQEGADTRNPVYQLPF

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24361; Mature: 24361

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRRTQQSRRESTIGKLVEAAIECLMESGYHGTSVQLICGRAGVSQGALFRHFATKNEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHH
MQPVGRKVVDDIFESALGLAAQLPPGMSEEERIIALMKALVMSPRHIVLLELLMAARTTP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
DLRDIFLGSSSTYFRDRFVAMMASLFPRYAISTGFFATLLTMMTTMHGMALYRTLAEHPE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDRMREQWLLSALRAELERIRQEGADTRNPVYQLPF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure
MQTRRTQQSRRESTIGKLVEAAIECLMESGYHGTSVQLICGRAGVSQGALFRHFATKNEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHH
MQPVGRKVVDDIFESALGLAAQLPPGMSEEERIIALMKALVMSPRHIVLLELLMAARTTP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
DLRDIFLGSSSTYFRDRFVAMMASLFPRYAISTGFFATLLTMMTTMHGMALYRTLAEHPE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDRMREQWLLSALRAELERIRQEGADTRNPVYQLPF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]