| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pabB [H]
Identifier: 34498866
GI number: 34498866
Start: 3704373
End: 3705665
Strand: Reverse
Name: pabB [H]
Synonym: CV_3411
Alternate gene names: 34498866
Gene position: 3705665-3704373 (Counterclockwise)
Preceding gene: 34498867
Following gene: 34498865
Centisome position: 78.0
GC content: 68.91
Gene sequence:
>1293_bases ATGTTCACCCAGAAACTCGATTTCATTCCCGACCTGCTGGCGCTGCATGCCGCGGACCGCGAAAACTTTCCCTATCTGAT GCAATCGTCCGGCGACGTCGGCTGGGACCTGCTGCTGATGCAGAGCGAGCGGCGCGTGTTCATGGCGGGCGAGGGGCAGG CCTTCCTCGACCAGCTGCGCGCGTTCCGGCCGCGGGCGGTGTCCAATCCGCACGGCCTGCCTTTCGTCGGCGGCTGGTTC GTCTACCTGGCCTACGACCTGTTGTCGGAATTCGAGCCGCATGTGCCGGCCGCCTTGCCGGACAGCTTTCCGCTGGCGGC ATGGGCGCGCGCGCCGGCCGCGGTGCTGGTGGACCGCGCCAAGAACGAAGCCTGGCTGGTCGGCGAAACCGCCGATGACT GGCATGCGCTGGAACGGCTGGTTTCGATGAGGCCCGCCTTCGCGCCCCAGCCGGTCGCCTTGGCCGCGCTGGAGGAAGAT CCGCCCGAGTGGTATACCGACGCGGTGGTTCGGCTCAAGCGCTACATCTACGAAGGCGACGTGTTCCAGGTGAACATCTC GCGCGGCTGGCGCGCCCAGCTGGCGGACGGCATCGCCGCGCCCGACCTGTTCGCGGCGCTGCGCCGGGCCAATCCGGCGC CGTTCTCGGCGCTGGCCGACTTCGGCGCCGCGCAGATCGTCAGCTCGTCGCCGGAGCGGCTGGTGCGGGTGCGCGACGGC TGGGCCGAAACCCGGCCGATCGCCGGCACCCACCCGCGCTCCCAGGACCCGGCCGAAGACGCCGAGCTGAAAAAGCGGCT GATCACCAGCATCAAGGAGCGCGCCGAGCATGTGATGCTGATCGACCTGGAGCGCAACGACCTGGGCCGCATCAGCCGGC CGGGCACGGTGGAAGTCAACGAGCTGATGGCGGTGGCCAGCTACGCCTACGTCCATCACATCGAGTCCAATGTCCGCGGC AAGCTGCGCGACGACATCGCGCCGGCGGACGTGCTGCGCGCGCTATTCCCCGGCGGCACCATCACCGGCTGTCCCAAGGT GCGGACCATGCAGATCATCCGCGAGCTGGAAAACAGCGCGCGGCGCGCCTATACCGGCAGCCTGGGCTATCTGAACCGCG ACGGCAGCATGGACTTCAACATCCTGATCCGCACCTTCATGCAGGAGGGCGACGCGCTGCGCTTCCGCGCCGGCGGCGGC ATCGTCGCCGACTCCGATCCCGAGCGCGAATTGCAGGAAACCCGTCACAAGGCGCGCGGCCTGCTGCGCGCGCTGGGCGT GGAGCAGGCCTGA
Upstream 100 bases:
>100_bases TGCGCTACACTCGCAGCGGTTTTTCTTTTTTCGCCGCCGCTCAAGGCGGGCGGCGAGTTGTCGCGAATCAGTGCCGGGCC TTGCCGGCCCAGGACCGTAG
Downstream 100 bases:
>100_bases TGGCGGTGCTGGTCAATGGCCTGCCTGGGGAGGCGGTGTCGGCGCTGGACCGCGGCTTCAACTACGGCGACGGCGTGTTC CGCACCATGCAGCTGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MFTQKLDFIPDLLALHAADRENFPYLMQSSGDVGWDLLLMQSERRVFMAGEGQAFLDQLRAFRPRAVSNPHGLPFVGGWF VYLAYDLLSEFEPHVPAALPDSFPLAAWARAPAAVLVDRAKNEAWLVGETADDWHALERLVSMRPAFAPQPVALAALEED PPEWYTDAVVRLKRYIYEGDVFQVNISRGWRAQLADGIAAPDLFAALRRANPAPFSALADFGAAQIVSSSPERLVRVRDG WAETRPIAGTHPRSQDPAEDAELKKRLITSIKERAEHVMLIDLERNDLGRISRPGTVEVNELMAVASYAYVHHIESNVRG KLRDDIAPADVLRALFPGGTITGCPKVRTMQIIRELENSARRAYTGSLGYLNRDGSMDFNILIRTFMQEGDALRFRAGGG IVADSDPERELQETRHKARGLLRALGVEQA
Sequences:
>Translated_430_residues MFTQKLDFIPDLLALHAADRENFPYLMQSSGDVGWDLLLMQSERRVFMAGEGQAFLDQLRAFRPRAVSNPHGLPFVGGWF VYLAYDLLSEFEPHVPAALPDSFPLAAWARAPAAVLVDRAKNEAWLVGETADDWHALERLVSMRPAFAPQPVALAALEED PPEWYTDAVVRLKRYIYEGDVFQVNISRGWRAQLADGIAAPDLFAALRRANPAPFSALADFGAAQIVSSSPERLVRVRDG WAETRPIAGTHPRSQDPAEDAELKKRLITSIKERAEHVMLIDLERNDLGRISRPGTVEVNELMAVASYAYVHHIESNVRG KLRDDIAPADVLRALFPGGTITGCPKVRTMQIIRELENSARRAYTGSLGYLNRDGSMDFNILIRTFMQEGDALRFRAGGG IVADSDPERELQETRHKARGLLRALGVEQA >Mature_430_residues MFTQKLDFIPDLLALHAADRENFPYLMQSSGDVGWDLLLMQSERRVFMAGEGQAFLDQLRAFRPRAVSNPHGLPFVGGWF VYLAYDLLSEFEPHVPAALPDSFPLAAWARAPAAVLVDRAKNEAWLVGETADDWHALERLVSMRPAFAPQPVALAALEED PPEWYTDAVVRLKRYIYEGDVFQVNISRGWRAQLADGIAAPDLFAALRRANPAPFSALADFGAAQIVSSSPERLVRVRDG WAETRPIAGTHPRSQDPAEDAELKKRLITSIKERAEHVMLIDLERNDLGRISRPGTVEVNELMAVASYAYVHHIESNVRG KLRDDIAPADVLRALFPGGTITGCPKVRTMQIIRELENSARRAYTGSLGYLNRDGSMDFNILIRTFMQEGDALRFRAGGG IVADSDPERELQETRHKARGLLRALGVEQA
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=402, Percent_Identity=37.3134328358209, Blast_Score=218, Evalue=7e-58, Organism=Escherichia coli, GI1787518, Length=374, Percent_Identity=33.1550802139037, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI87082077, Length=268, Percent_Identity=29.8507462686567, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1786809, Length=220, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=378, Percent_Identity=33.5978835978836, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6324361, Length=407, Percent_Identity=24.0786240786241, Blast_Score=107, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR010118 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 47878; Mature: 47878
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTQKLDFIPDLLALHAADRENFPYLMQSSGDVGWDLLLMQSERRVFMAGEGQAFLDQLR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHH AFRPRAVSNPHGLPFVGGWFVYLAYDLLSEFEPHVPAALPDSFPLAAWARAPAAVLVDRA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHC KNEAWLVGETADDWHALERLVSMRPAFAPQPVALAALEEDPPEWYTDAVVRLKRYIYEGD CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC VFQVNISRGWRAQLADGIAAPDLFAALRRANPAPFSALADFGAAQIVSSSPERLVRVRDG EEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCHHHHHHHHCC WAETRPIAGTHPRSQDPAEDAELKKRLITSIKERAEHVMLIDLERNDLGRISRPGTVEVN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEHH ELMAVASYAYVHHIESNVRGKLRDDIAPADVLRALFPGGTITGCPKVRTMQIIRELENSA HHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RRAYTGSLGYLNRDGSMDFNILIRTFMQEGDALRFRAGGGIVADSDPERELQETRHKARG HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEECCCCHHHHHHHHHHHHHH LLRALGVEQA HHHHHCCCCC >Mature Secondary Structure MFTQKLDFIPDLLALHAADRENFPYLMQSSGDVGWDLLLMQSERRVFMAGEGQAFLDQLR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHH AFRPRAVSNPHGLPFVGGWFVYLAYDLLSEFEPHVPAALPDSFPLAAWARAPAAVLVDRA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHC KNEAWLVGETADDWHALERLVSMRPAFAPQPVALAALEEDPPEWYTDAVVRLKRYIYEGD CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC VFQVNISRGWRAQLADGIAAPDLFAALRRANPAPFSALADFGAAQIVSSSPERLVRVRDG EEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCHHHHHHHHCC WAETRPIAGTHPRSQDPAEDAELKKRLITSIKERAEHVMLIDLERNDLGRISRPGTVEVN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEHH ELMAVASYAYVHHIESNVRGKLRDDIAPADVLRALFPGGTITGCPKVRTMQIIRELENSA HHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RRAYTGSLGYLNRDGSMDFNILIRTFMQEGDALRFRAGGGIVADSDPERELQETRHKARG HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEECCCCHHHHHHHHHHHHHH LLRALGVEQA HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]