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The map label for this gene is scpB [H]

Identifier: 34498842

GI number: 34498842

Start: 3681375

End: 3682007

Strand: Reverse

Name: scpB [H]

Synonym: CV_3387

Alternate gene names: 34498842

Gene position: 3682007-3681375 (Counterclockwise)

Preceding gene: 34498843

Following gene: 34498841

Centisome position: 77.5

GC content: 61.14

Gene sequence:

>633_bases
ATGTCCACCATTACCGATTTAAAGTATCTGAAGATTGTGCTGGAGACGGCCTTGCTGACAGCGCAGGAACCCCTGTCGGT
TTCCCAGCTGAAAAGGCTGTTCACCGAGGACGTCAAGGCCGCGCTGATCAACGACATCCTGGAGGATATCCAGGGCGACT
GGCGCGGCAGGGGAATCGAGCTGGTCAAGCTGGCTTCAGGCTGGCGCTTCCGCGCCCGGGCCGAATTCACGCCTTACCTG
AACCGGCTCAATCCGGAAAAGCCGCCCCGCTATTCGCGGGCGGTGATGGAAACCCTGGCGATCATCGCCTACAAACAACC
TGTGACCCGTGGCGACATCGAAGCGATACGCGGCGTATCGGTGTCCACCAATGTGATGCAGACCCTGCTGGAGCGGGGCT
GGATCGAAGTCATCGGTCACAAGGACGTACCGGGCCGCCCCGGCCTGTACGCCACCACGCGCAAATTTCTGGATGATCTG
AGCTTCGTCTCGCTGAACGACCTGCCGCCGCTGGCGGAGCTGGGCAGCCTGGTGGTGCCGGATCCCCAAACACAGGACGA
CAGCCCCGATGCGGGCGCAGACGATATCCCCCTCGACGATGAGGCGGACAATTTAGAGCCAGTCGCGGAATAA

Upstream 100 bases:

>100_bases
CTCGATGGGACTGATGCAATAGTTTCGCGCTCGGCGGAAGTCGTGTAGAATCCACGGCTTCCCCGCGCTTAGACCCCGAA
CTCTCCGGCACCCCGGTTTA

Downstream 100 bases:

>100_bases
CGCTTCCGCCAGTTGCTCGCATGGAAAGAGCAAGCACATATGTCTACAAAAGGACAACGTAGCCACGCGCGCCAGCCGGT
AGCGCGGGTCAAGGGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSTITDLKYLKIVLETALLTAQEPLSVSQLKRLFTEDVKAALINDILEDIQGDWRGRGIELVKLASGWRFRARAEFTPYL
NRLNPEKPPRYSRAVMETLAIIAYKQPVTRGDIEAIRGVSVSTNVMQTLLERGWIEVIGHKDVPGRPGLYATTRKFLDDL
SFVSLNDLPPLAELGSLVVPDPQTQDDSPDAGADDIPLDDEADNLEPVAE

Sequences:

>Translated_210_residues
MSTITDLKYLKIVLETALLTAQEPLSVSQLKRLFTEDVKAALINDILEDIQGDWRGRGIELVKLASGWRFRARAEFTPYL
NRLNPEKPPRYSRAVMETLAIIAYKQPVTRGDIEAIRGVSVSTNVMQTLLERGWIEVIGHKDVPGRPGLYATTRKFLDDL
SFVSLNDLPPLAELGSLVVPDPQTQDDSPDAGADDIPLDDEADNLEPVAE
>Mature_209_residues
STITDLKYLKIVLETALLTAQEPLSVSQLKRLFTEDVKAALINDILEDIQGDWRGRGIELVKLASGWRFRARAEFTPYLN
RLNPEKPPRYSRAVMETLAIIAYKQPVTRGDIEAIRGVSVSTNVMQTLLERGWIEVIGHKDVPGRPGLYATTRKFLDDLS
FVSLNDLPPLAELGSLVVPDPQTQDDSPDAGADDIPLDDEADNLEPVAE

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 23340; Mature: 23209

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITDLKYLKIVLETALLTAQEPLSVSQLKRLFTEDVKAALINDILEDIQGDWRGRGIE
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LVKLASGWRFRARAEFTPYLNRLNPEKPPRYSRAVMETLAIIAYKQPVTRGDIEAIRGVS
EEEECCCCCEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
VSTNVMQTLLERGWIEVIGHKDVPGRPGLYATTRKFLDDLSFVSLNDLPPLAELGSLVVP
CHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCEECC
DPQTQDDSPDAGADDIPLDDEADNLEPVAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STITDLKYLKIVLETALLTAQEPLSVSQLKRLFTEDVKAALINDILEDIQGDWRGRGIE
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LVKLASGWRFRARAEFTPYLNRLNPEKPPRYSRAVMETLAIIAYKQPVTRGDIEAIRGVS
EEEECCCCCEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
VSTNVMQTLLERGWIEVIGHKDVPGRPGLYATTRKFLDDLSFVSLNDLPPLAELGSLVVP
CHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCEECC
DPQTQDDSPDAGADDIPLDDEADNLEPVAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]