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The map label for this gene is exdD [C]

Identifier: 34498802

GI number: 34498802

Start: 3644157

End: 3644573

Strand: Reverse

Name: exdD [C]

Synonym: CV_3347

Alternate gene names: 34498802

Gene position: 3644573-3644157 (Counterclockwise)

Preceding gene: 34498803

Following gene: 34498801

Centisome position: 76.71

GC content: 64.03

Gene sequence:

>417_bases
ATGGATTTTCGTCGCGGCCGAGGCCGGGAGGAGCCGGAGATCAACTTCATCCCGTTGATCGACGTGCTGCTGGTGATCCT
GATCTTCCTGATGGTCACCACCACCTATTCGCATTTTTCGGAGTTGAAGATCAACCTGCCCGCCGCGCAGGGCGAGCAGC
AACAGAACAAGACCGTCGAGATCAAGGTGGCGGTGGCCGCCGACGGCGCGATGGCGGTAGGCGACGCCAGGCTGGCGCCA
GGCGACAAGGCCGGGCTGCTGGCCAGCCTGAAAACCGCCGCGGCCGGCAAGACAGACGTGGTGGTGGTGGTCAACGCCGA
CGCCAGGTCCACGCATCAATCGGTGATCACCGTGATGGAGGCCGCGCGCGAGGCCGGCCTGTCGCAACTGACTTTCGCCA
CCCAGAACCTGAAGTGA

Upstream 100 bases:

>100_bases
ACTTCCGCTCCAAGGTGGACGGCCTGCTGGTGGAGATGGAGGCGCAGGCGGTCAAGCTGGTGGAAGTGGCGCACGGCGAG
CGCAAGAACGGGAGCTGAGC

Downstream 100 bases:

>100_bases
AGCCGAAGGCCGCATGCGTCTGATCGAACAACACTGGTACCGGCCGCGAGGCTGGCTGACAGCCCTTCTGGCGCCGCTGG
AAGGGCTGTTTGCGCTGCTG

Product: biopolymer transport exbD-related transmembrane protein

Products: NA

Alternate protein names: Biopolymer Transport ExbD-Related Transmembrane Protein; Biopolymer Transport; Biopolymer Transporter; Biopolymer Transport Protein ExbD; Biopolymer Transport Protein Exbd/lr; Iopolymer Transport ExbD2 Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDFRRGRGREEPEINFIPLIDVLLVILIFLMVTTTYSHFSELKINLPAAQGEQQQNKTVEIKVAVAADGAMAVGDARLAP
GDKAGLLASLKTAAAGKTDVVVVVNADARSTHQSVITVMEAAREAGLSQLTFATQNLK

Sequences:

>Translated_138_residues
MDFRRGRGREEPEINFIPLIDVLLVILIFLMVTTTYSHFSELKINLPAAQGEQQQNKTVEIKVAVAADGAMAVGDARLAP
GDKAGLLASLKTAAAGKTDVVVVVNADARSTHQSVITVMEAAREAGLSQLTFATQNLK
>Mature_138_residues
MDFRRGRGREEPEINFIPLIDVLLVILIFLMVTTTYSHFSELKINLPAAQGEQQQNKTVEIKVAVAADGAMAVGDARLAP
GDKAGLLASLKTAAAGKTDVVVVVNADARSTHQSVITVMEAAREAGLSQLTFATQNLK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789380, Length=118, Percent_Identity=28.8135593220339, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14747; Mature: 14747

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRRGRGREEPEINFIPLIDVLLVILIFLMVTTTYSHFSELKINLPAAQGEQQQNKTVE
CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEE
IKVAVAADGAMAVGDARLAPGDKAGLLASLKTAAAGKTDVVVVVNADARSTHQSVITVME
EEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
AAREAGLSQLTFATQNLK
HHHHCCCHHEEHHCCCCC
>Mature Secondary Structure
MDFRRGRGREEPEINFIPLIDVLLVILIFLMVTTTYSHFSELKINLPAAQGEQQQNKTVE
CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEE
IKVAVAADGAMAVGDARLAPGDKAGLLASLKTAAAGKTDVVVVVNADARSTHQSVITVME
EEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
AAREAGLSQLTFATQNLK
HHHHCCCHHEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA