| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498784
Identifier: 34498784
GI number: 34498784
Start: 3628258
End: 3628827
Strand: Direct
Name: 34498784
Synonym: CV_3329
Alternate gene names: NA
Gene position: 3628258-3628827 (Clockwise)
Preceding gene: 34498783
Following gene: 34498785
Centisome position: 76.37
GC content: 59.65
Gene sequence:
>570_bases ATGATCAAGCTGCTGCGCTCACACCGCCTGTTCCCGGTGCTGCTGATCGGCCTGACCGCGCTGCTGACGGTATGGCTGGA CCAGATCTCGCGCTGGGACAGCCACCGCCGCGAGCTGGACCCGGACAAGCCCGAATACGTGGCGGAAAACCTGGTGGCAA CCCGCTACGACAAGCAGGGCATGCTGATGGACAAGCTGATCGCCACCCGGATGTGGCAATACCCAGGCAAGCCCGACGCC TATTTCGAGAACCCCGACCTGTACCAGTACCAGCAGGGCGCGCTGCAATACCACGTGACCGGCGAGACCGGACGCTACAA CAACAAAAGCCAGCAGGCCTACTTCGACAAGAAAGTCGTTTTGATCAAACCCGCAGACAGCAAGCAACCGGAAACCCGGC TGGTCAGCAGCGCGATGTTCGTCGACACCGGCAAGCGCTTCGCCAGCTCCAAGGCGCCATCGGTGATCTATCAGGGCAAT TCGGTGGCCAACTCCATCGGCTTCAGCTACCAGGAGTCGCTGGGCCTGCTCAATCTGTACTCCAAAACCAAGATCGTCTA TGTCAAATAA
Upstream 100 bases:
>100_bases TGACCGGCAACCCCGGCGGCCACGGCGCGGTGCGCGAGCTCGCCGAGCTGATCATGCAGGCCCAGGGCAGTTTCGAAGGC GTGCTCGCACGGTATCTGGC
Downstream 100 bases:
>100_bases CTCCCGCATCCTGCTGGCCGGCCTGCTGCTGTCCGCCGCCGCGCTGGCCCACGCCGAACAGGCGGATAAAACCAAGCCCA TCGAAATCACCAGCGACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MIKLLRSHRLFPVLLIGLTALLTVWLDQISRWDSHRRELDPDKPEYVAENLVATRYDKQGMLMDKLIATRMWQYPGKPDA YFENPDLYQYQQGALQYHVTGETGRYNNKSQQAYFDKKVVLIKPADSKQPETRLVSSAMFVDTGKRFASSKAPSVIYQGN SVANSIGFSYQESLGLLNLYSKTKIVYVK
Sequences:
>Translated_189_residues MIKLLRSHRLFPVLLIGLTALLTVWLDQISRWDSHRRELDPDKPEYVAENLVATRYDKQGMLMDKLIATRMWQYPGKPDA YFENPDLYQYQQGALQYHVTGETGRYNNKSQQAYFDKKVVLIKPADSKQPETRLVSSAMFVDTGKRFASSKAPSVIYQGN SVANSIGFSYQESLGLLNLYSKTKIVYVK >Mature_189_residues MIKLLRSHRLFPVLLIGLTALLTVWLDQISRWDSHRRELDPDKPEYVAENLVATRYDKQGMLMDKLIATRMWQYPGKPDA YFENPDLYQYQQGALQYHVTGETGRYNNKSQQAYFDKKVVLIKPADSKQPETRLVSSAMFVDTGKRFASSKAPSVIYQGN SVANSIGFSYQESLGLLNLYSKTKIVYVK
Specific function: Unknown
COG id: COG3117
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21723; Mature: 21723
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLLRSHRLFPVLLIGLTALLTVWLDQISRWDSHRRELDPDKPEYVAENLVATRYDKQG CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC MLMDKLIATRMWQYPGKPDAYFENPDLYQYQQGALQYHVTGETGRYNNKSQQAYFDKKVV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCHHHHCCEEE LIKPADSKQPETRLVSSAMFVDTGKRFASSKAPSVIYQGNSVANSIGFSYQESLGLLNLY EEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCHHHHHCCCHHHHCCCEEEC SKTKIVYVK CCCEEEEEC >Mature Secondary Structure MIKLLRSHRLFPVLLIGLTALLTVWLDQISRWDSHRRELDPDKPEYVAENLVATRYDKQG CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC MLMDKLIATRMWQYPGKPDAYFENPDLYQYQQGALQYHVTGETGRYNNKSQQAYFDKKVV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCHHHHCCEEE LIKPADSKQPETRLVSSAMFVDTGKRFASSKAPSVIYQGNSVANSIGFSYQESLGLLNLY EEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCHHHHHCCCHHHHCCCEEEC SKTKIVYVK CCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA