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The map label for this gene is kdsD [H]

Identifier: 34498782

GI number: 34498782

Start: 3626755

End: 3627690

Strand: Direct

Name: kdsD [H]

Synonym: CV_3327

Alternate gene names: 34498782

Gene position: 3626755-3627690 (Clockwise)

Preceding gene: 34498780

Following gene: 34498783

Centisome position: 76.34

GC content: 69.23

Gene sequence:

>936_bases
GTGCTGCTCACCGAAGCGGCCGCGCTGAGCACCCTGGCCGAACGCCTGAACGGCGAGTTTCTGGACGCGGTGGAAGCGAT
TCTGGCCTGCCAGGGCCGCGTGATTGTCACCGGCATGGGCAAGTCCGGCCACGTCGGCCGCAAGATCGCCGCCACGCTGG
CCAGCACCGGCACCCCGGCCTTCTTCGTGCATCCGGCCGAAGCCGCCCACGGCGACCTGGGCATGATCACCGGCGACGAT
GTGGTGATCGCGCTGTCCAACTCCGGCGAGTCGGCCGAAGTGGTGTCGCTGCTGCCGGCGCTGAAGCTGAAAGGCAGCAA
GCTGATCGCGGTGACCGGCCGGTCCGAATCGACGCTGGCGCAGGCCGCCGACGTCCTGCTGCACACGCATGTCGAGCGCG
AGGCCTGCCCGCTGAACCTGGCGCCGACCACCAGCACCACCGCGCAGATCGCGCTGGGCGACGCGCTGGCGGTGACGCTG
ATGGAGGCGCGCGGCTTCGGGCAGAGCGATTTCGCGCTGTCCCACCCGGGCGGCAGCCTGGGCCGGCGCCTGCTGGTGCA
CGTGAAGGACCTCATGCACGGCGGCGACGCCCTGCCCCGCGTGGCGCCGGGCACGCCGCTGAAGGACGCGCTGCTGGAAA
TGTCCCAGAAACGTCTGGGCATGGTCACCGTCGGCGATGCCGACGGCACGCTGCACGGCATCTACACCGACGGCGACTTG
CGCCGCACGCTGGAAAAGGGCGTGGACGTCTACCGCTTGAAAGTGGACGAGGTAATGGGCCGCAAGCCGCGCACGATACA
ACCGGACAAGCTGGCGGCCGAGGCCGGCTTCCTGATGAAACAGCACCAGATCACCAGCCTGGTGGTCGTCGACGCCCAGG
GCAAGCTGGCCGGCGTGCTCCACATGCACGACCTGCTGCACGCCGGCGTGTTTTAA

Upstream 100 bases:

>100_bases
CAAAACTTGCACCAGCACCCGCGTCAATCGATTATAACCTTTGATATACTTTTGCCTTATGGAAAAAACTCACATCAGCC
GCCTGGAGACGGCGCGCGAA

Downstream 100 bases:

>100_bases
CACCAGCCGGCCGGTCGCATCGACCGGCGGCGGCAAGGATCAAGCAATGCGTATGATTTCCGAGCAGGCCCGCAAGGTGA
AACTGCTGATCATGGATGTG

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MLLTEAAALSTLAERLNGEFLDAVEAILACQGRVIVTGMGKSGHVGRKIAATLASTGTPAFFVHPAEAAHGDLGMITGDD
VVIALSNSGESAEVVSLLPALKLKGSKLIAVTGRSESTLAQAADVLLHTHVEREACPLNLAPTTSTTAQIALGDALAVTL
MEARGFGQSDFALSHPGGSLGRRLLVHVKDLMHGGDALPRVAPGTPLKDALLEMSQKRLGMVTVGDADGTLHGIYTDGDL
RRTLEKGVDVYRLKVDEVMGRKPRTIQPDKLAAEAGFLMKQHQITSLVVVDAQGKLAGVLHMHDLLHAGVF

Sequences:

>Translated_311_residues
MLLTEAAALSTLAERLNGEFLDAVEAILACQGRVIVTGMGKSGHVGRKIAATLASTGTPAFFVHPAEAAHGDLGMITGDD
VVIALSNSGESAEVVSLLPALKLKGSKLIAVTGRSESTLAQAADVLLHTHVEREACPLNLAPTTSTTAQIALGDALAVTL
MEARGFGQSDFALSHPGGSLGRRLLVHVKDLMHGGDALPRVAPGTPLKDALLEMSQKRLGMVTVGDADGTLHGIYTDGDL
RRTLEKGVDVYRLKVDEVMGRKPRTIQPDKLAAEAGFLMKQHQITSLVVVDAQGKLAGVLHMHDLLHAGVF
>Mature_311_residues
MLLTEAAALSTLAERLNGEFLDAVEAILACQGRVIVTGMGKSGHVGRKIAATLASTGTPAFFVHPAEAAHGDLGMITGDD
VVIALSNSGESAEVVSLLPALKLKGSKLIAVTGRSESTLAQAADVLLHTHVEREACPLNLAPTTSTTAQIALGDALAVTL
MEARGFGQSDFALSHPGGSLGRRLLVHVKDLMHGGDALPRVAPGTPLKDALLEMSQKRLGMVTVGDADGTLHGIYTDGDL
RRTLEKGVDVYRLKVDEVMGRKPRTIQPDKLAAEAGFLMKQHQITSLVVVDAQGKLAGVLHMHDLLHAGVF

Specific function: Catalyzes the interconversion of D-arabinose 5-phosphate and D-ribulose 5-phosphate [H]

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=310, Percent_Identity=56.1290322580645, Blast_Score=341, Evalue=4e-95,
Organism=Escherichia coli, GI87082151, Length=310, Percent_Identity=48.7096774193548, Blast_Score=281, Evalue=5e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: =5.3.1.13 [H]

Molecular weight: Translated: 32560; Mature: 32560

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTEAAALSTLAERLNGEFLDAVEAILACQGRVIVTGMGKSGHVGRKIAATLASTGTPA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCE
FFVHPAEAAHGDLGMITGDDVVIALSNSGESAEVVSLLPALKLKGSKLIAVTGRSESTLA
EEEECCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHH
QAADVLLHTHVEREACPLNLAPTTSTTAQIALGDALAVTLMEARGFGQSDFALSHPGGSL
HHHHHHHHHHCCHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCEEECCCHHH
GRRLLVHVKDLMHGGDALPRVAPGTPLKDALLEMSQKRLGMVTVGDADGTLHGIYTDGDL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEEEECHHH
RRTLEKGVDVYRLKVDEVMGRKPRTIQPDKLAAEAGFLMKQHQITSLVVVDAQGKLAGVL
HHHHHCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHH
HMHDLLHAGVF
HHHHHHHHCCC
>Mature Secondary Structure
MLLTEAAALSTLAERLNGEFLDAVEAILACQGRVIVTGMGKSGHVGRKIAATLASTGTPA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCE
FFVHPAEAAHGDLGMITGDDVVIALSNSGESAEVVSLLPALKLKGSKLIAVTGRSESTLA
EEEECCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHH
QAADVLLHTHVEREACPLNLAPTTSTTAQIALGDALAVTLMEARGFGQSDFALSHPGGSL
HHHHHHHHHHCCHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCEEECCCHHH
GRRLLVHVKDLMHGGDALPRVAPGTPLKDALLEMSQKRLGMVTVGDADGTLHGIYTDGDL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEEEECHHH
RRTLEKGVDVYRLKVDEVMGRKPRTIQPDKLAAEAGFLMKQHQITSLVVVDAQGKLAGVL
HHHHHCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHH
HMHDLLHAGVF
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]