| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mntH [H]
Identifier: 34498769
GI number: 34498769
Start: 3606497
End: 3607750
Strand: Direct
Name: mntH [H]
Synonym: CV_3314
Alternate gene names: 34498769
Gene position: 3606497-3607750 (Clockwise)
Preceding gene: 34498768
Following gene: 34498770
Centisome position: 75.91
GC content: 72.73
Gene sequence:
>1254_bases ATGAGCGGGACCGACATGCCGCTGCAACCATCGGCGCTGCGCCGGCTGCGCCACCTGCTGGCCGCGCTCGGCCCCGGCCT GGTGGTGATGCTGGCCGACACCGAAACCGGCAGCGTGATCGCCGCCGCCCAGAGCGGCGCGCACTGGGGCTACCGCATGC TGCCGCTGCTGTTGGTGCTGATTCCGTTGCTGTACCTGGCGCAGGAGCTGACGATACGGCTGGCGCTGGGCACCGGGCTG AGCTACGGCGAGCTGGTGCGCCGCCGCTGGGGCCGCCGCGCCGAGCGGGCCTCGGCCGCCGTGCTGCTGCTGAGCTGCCT GGGCGCGCTGGCCACGCAGCTGGCAGGCCTGGCCGGCATCGGCCAGCTGTTCGGCATCCCCGCCTGGCAGACGATAACCC TGCTGTGCGCGCTGGTCCTGGCCATGGTGTGCACCGGCAGCTACCGCTCGGTGGAGCGCATCGTGCTCTGCCTGGGCGTG TTCGAGCTGGCTTTTCTGGCCGAAGCCTGGCTGGCCCGCCCCGACCCGGGCCAGATGGCGGCGCAGCTGTCCAGCCTGCC GCTGGGCAGCCACGACTTCCTGCTGCTGGCCGCCGCCAACATCGGCACCTGCGTGATGCCGTGGACGCTCTGCTACCAGC AATCGGCGCTGCTGGACAAGGGGCTGACGCTGGACGACCTGAAGCCGGCGCGGCTGGACACGCTGCTGGGCGCCATCCTG TGCCAGATCATCACCGCCGGCATTTTGATCGCCGCCGCCGCGGCCTTCGGCGACGGCGCCGGCGGACAAAGCTTGGACAC CATCCCCGAGATCGCCGGCGGCTTCACCCGCCTGCTCGGCCCCACCGGCGGCCGCCTGCTGTTCGCGCTGGCGCTGGGCG GCGGCGCGCTGGTCGCCGCCATCGTGGTCTGCCTGACCAGCGCCTGGACGCTGGGCGAACTGGCCGGACGGCGCGACTCG CTGGAAAAGCATCCGCTGGACGCGCCCTGGTTCTACGGCGGCTTCGCCGCGATGCTGGCCGGCGCCGACGCGCTGGTGGC CTCGGGCGTCAACCTGGTCAAGCTGTCCATCGTCACCTCGGTCGCCAACGCGCTCTTGCTGCCCGTGATGCTCGCCGGGC TGTACTGGCTGGCCTGCCGCGAGCTGCCGGCGCCGCTGGCGCCGAGCCGCCGCTACCGGATGGCGCTGGCGCCGCTGTTG CTGCTGCTCGCCGGCTTCAGCCTCTACGCCGGCGTCGTCGGCAGCCTGGGCTGA
Upstream 100 bases:
>100_bases CCTACCGCCAGTCGCTGGCCGACTCCGCGCCGACGCTGGTGCTGTCGCCCGACTCCGCGCTGCTGCATGACCTGAAAACC GGTCCGGCGGGCGGCAAGCC
Downstream 100 bases:
>100_bases CGCCCGATCCTCAAGGAATACGCTATGGAACCCGACAGCCTCGCCCGCTCGCTGAGCCTGACCTTCCAGGTCTCCTTCCT GGACCTCATCCTCAGCGGCG
Product: membrane transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSGTDMPLQPSALRRLRHLLAALGPGLVVMLADTETGSVIAAAQSGAHWGYRMLPLLLVLIPLLYLAQELTIRLALGTGL SYGELVRRRWGRRAERASAAVLLLSCLGALATQLAGLAGIGQLFGIPAWQTITLLCALVLAMVCTGSYRSVERIVLCLGV FELAFLAEAWLARPDPGQMAAQLSSLPLGSHDFLLLAAANIGTCVMPWTLCYQQSALLDKGLTLDDLKPARLDTLLGAIL CQIITAGILIAAAAAFGDGAGGQSLDTIPEIAGGFTRLLGPTGGRLLFALALGGGALVAAIVVCLTSAWTLGELAGRRDS LEKHPLDAPWFYGGFAAMLAGADALVASGVNLVKLSIVTSVANALLLPVMLAGLYWLACRELPAPLAPSRRYRMALAPLL LLLAGFSLYAGVVGSLG
Sequences:
>Translated_417_residues MSGTDMPLQPSALRRLRHLLAALGPGLVVMLADTETGSVIAAAQSGAHWGYRMLPLLLVLIPLLYLAQELTIRLALGTGL SYGELVRRRWGRRAERASAAVLLLSCLGALATQLAGLAGIGQLFGIPAWQTITLLCALVLAMVCTGSYRSVERIVLCLGV FELAFLAEAWLARPDPGQMAAQLSSLPLGSHDFLLLAAANIGTCVMPWTLCYQQSALLDKGLTLDDLKPARLDTLLGAIL CQIITAGILIAAAAAFGDGAGGQSLDTIPEIAGGFTRLLGPTGGRLLFALALGGGALVAAIVVCLTSAWTLGELAGRRDS LEKHPLDAPWFYGGFAAMLAGADALVASGVNLVKLSIVTSVANALLLPVMLAGLYWLACRELPAPLAPSRRYRMALAPLL LLLAGFSLYAGVVGSLG >Mature_416_residues SGTDMPLQPSALRRLRHLLAALGPGLVVMLADTETGSVIAAAQSGAHWGYRMLPLLLVLIPLLYLAQELTIRLALGTGLS YGELVRRRWGRRAERASAAVLLLSCLGALATQLAGLAGIGQLFGIPAWQTITLLCALVLAMVCTGSYRSVERIVLCLGVF ELAFLAEAWLARPDPGQMAAQLSSLPLGSHDFLLLAAANIGTCVMPWTLCYQQSALLDKGLTLDDLKPARLDTLLGAILC QIITAGILIAAAAAFGDGAGGQSLDTIPEIAGGFTRLLGPTGGRLLFALALGGGALVAAIVVCLTSAWTLGELAGRRDSL EKHPLDAPWFYGGFAAMLAGADALVASGVNLVKLSIVTSVANALLLPVMLAGLYWLACRELPAPLAPSRRYRMALAPLLL LLAGFSLYAGVVGSLG
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 43425; Mature: 43294
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTDMPLQPSALRRLRHLLAALGPGLVVMLADTETGSVIAAAQSGAHWGYRMLPLLLVL CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHH IPLLYLAQELTIRLALGTGLSYGELVRRRWGRRAERASAAVLLLSCLGALATQLAGLAGI HHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQLFGIPAWQTITLLCALVLAMVCTGSYRSVERIVLCLGVFELAFLAEAWLARPDPGQMA HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AQLSSLPLGSHDFLLLAAANIGTCVMPWTLCYQQSALLDKGLTLDDLKPARLDTLLGAIL HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH CQIITAGILIAAAAAFGDGAGGQSLDTIPEIAGGFTRLLGPTGGRLLFALALGGGALVAA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH IVVCLTSAWTLGELAGRRDSLEKHPLDAPWFYGGFAAMLAGADALVASGVNLVKLSIVTS HHHHHHCCHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHH VANALLLPVMLAGLYWLACRELPAPLAPSRRYRMALAPLLLLLAGFSLYAGVVGSLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGTDMPLQPSALRRLRHLLAALGPGLVVMLADTETGSVIAAAQSGAHWGYRMLPLLLVL CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHH IPLLYLAQELTIRLALGTGLSYGELVRRRWGRRAERASAAVLLLSCLGALATQLAGLAGI HHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQLFGIPAWQTITLLCALVLAMVCTGSYRSVERIVLCLGVFELAFLAEAWLARPDPGQMA HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AQLSSLPLGSHDFLLLAAANIGTCVMPWTLCYQQSALLDKGLTLDDLKPARLDTLLGAIL HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH CQIITAGILIAAAAAFGDGAGGQSLDTIPEIAGGFTRLLGPTGGRLLFALALGGGALVAA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH IVVCLTSAWTLGELAGRRDSLEKHPLDAPWFYGGFAAMLAGADALVASGVNLVKLSIVTS HHHHHHCCHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHH VANALLLPVMLAGLYWLACRELPAPLAPSRRYRMALAPLLLLLAGFSLYAGVVGSLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]