| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498756
Identifier: 34498756
GI number: 34498756
Start: 3594302
End: 3596020
Strand: Direct
Name: 34498756
Synonym: CV_3301
Alternate gene names: NA
Gene position: 3594302-3596020 (Clockwise)
Preceding gene: 34498750
Following gene: 34498759
Centisome position: 75.65
GC content: 51.19
Gene sequence:
>1719_bases ATGCATCGAATCATTCAGTCCCACTTAGCAAGTTTTGTCACTAGCTTTGGACTTGAAGCTGACGATGAGGCAACTCAGTT CGAGAAATTTTCTTCTCATTGCATTCTCTCCAGTTTCTACGCTGGAGAATTCGATCTAGATGACGTGGTGACGTCTACGG GAGACGACGGCATTGACGCCGTTGCTGTTGTGATCGACGAAATGGTTACCACTTCCGCAGAGGACGCGGCAGCACCATTC CAAACTGCCCGCCGGAATCACGATGTCGACTTCGTATTCATTCAGGCCAAGCGAAGCGAGGGTTTCGATCTCGGTGAGTT TCTGAAGTTTAAAGAGGGCATCCTCCGCTTTGTAAATCAAACCCCTTACGCAGCGACAGATGAAGTTCTTGTCGAAGCTC GCGCCACTTTCGAACTCGTAGTGCGAGAAGTCCCAAAACTAAGAAACGGACGTCCGACACTGACTGCGAGGTTCGTTACT ACGGGACAGTACCAAAAACCAGATGCGCTAGAAACTGCGCTCCGCGACTTCGTCGGACAACTGACCGAACTAGGACTGTT TCACAGTATCGATGTAAAGTTCGTAGATCGCGACGAACTCACTAAGTTGTGGGTTGGAACATATTCTGGTGTCGAAGCGA GCTTGCCACTGTTTAGCCAAGCCGCACTGCCGAATATCCGCGGGATCGACGAGGCATACCTAGCAGTGGTCAAAGCGAGC GACTTTGTCGACAATCTTCTCGTTACCTCTGAAGGGGGCCTTCGTACTCATGTTTTCGAGGAGAACGTTCGGTCGTTCCT TGGTGAAGACAACACAGTGAACGCATCGATTGCAGCGACACTAGCTTCTGACAGTTCGTCGCGCTTCCCGGTGCTAAACA ACGGGATCACAATCGTTTGCCCTGACATCAAGCTCCAAGGCACAACCCTTCATCTATTCAATTATCAGATTGTTAATGGC TGCCAAACGTCAAACGTACTCTTTCGCCATCGCGAGGCACTTGGCGACGTAATGGTCAATATCAAAGTGGTAAAGACACA GCACGAGGACGTGTTCGCCGAACTTGTCCGAGCGACCAATAGCCAATCAAAGGTGGAGGACGCGCAGTTCCTCTCACTTA AGCCAATTGTCAGAAACGTCGAACACTACTTCAACTCGTACGATGGAGCAGAGAGCCGCCTGTACCTTGAGCGACGCGAC AGACAGTTCGTTGGAATGGAAGTGCCGGCCATTCGCATCTTCACTTTGAACAACGCATCAAGGTGCGTCGCAGCAATGTG GCTGAACCGACCAGAACTCGCAAGTCGCTATACAAAGCAGATGTATAACGAATTGAAAGACCAAATGTTTGCTGACACAG TCAAGGAATCGGTCTACTACGCTTCCTGCTTGACTATGTATCGCTTCAACCTACTAGTGTCGAATAGTACGATACCGAAG AACATGAAGCGGTTCAAATGGCACATGCTCACCTTGGCTCGAGCCGCTATTTGCGGCGGCGGAGAGATAGTGCCCCTAAA CTCTAGGCAAGCCGAGCGGTCAGCCCTGCGCGTCATAGAAGTCATGGGGCAACATGGAGCCGCAGCCACGGAAGTTTTTG CCCGTATCGTGGCAGTTTGCCAAGGCTTGGGGGACGTGACCGCTGACAGGCTAAAACGCCAAACCGTCCTACAAGAGTTG CTGGCGGGCCTTGGTAAACCAGCTGTCGATGCTAACTAG
Upstream 100 bases:
>100_bases GCGCCGACGGCTATCCCCTAGCTCCACGTTAGGCCACGCAAAAAAGGTCGCACAGTCGGTACGCACATAAATTTCACCAC TTCACTCCGGACGGATCTCT
Downstream 100 bases:
>100_bases ATCTACCCTTCTGAGGGCTCGCCCCGGCAAGCCTGGTCGAGACTCTTATGCCCCATATTATGCATAAGACATATTCACCA CCAAAAAATGGGGACCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Abortive Infection Phage Resistance Protein AbiU; Abortive Phage Infection
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MHRIIQSHLASFVTSFGLEADDEATQFEKFSSHCILSSFYAGEFDLDDVVTSTGDDGIDAVAVVIDEMVTTSAEDAAAPF QTARRNHDVDFVFIQAKRSEGFDLGEFLKFKEGILRFVNQTPYAATDEVLVEARATFELVVREVPKLRNGRPTLTARFVT TGQYQKPDALETALRDFVGQLTELGLFHSIDVKFVDRDELTKLWVGTYSGVEASLPLFSQAALPNIRGIDEAYLAVVKAS DFVDNLLVTSEGGLRTHVFEENVRSFLGEDNTVNASIAATLASDSSSRFPVLNNGITIVCPDIKLQGTTLHLFNYQIVNG CQTSNVLFRHREALGDVMVNIKVVKTQHEDVFAELVRATNSQSKVEDAQFLSLKPIVRNVEHYFNSYDGAESRLYLERRD RQFVGMEVPAIRIFTLNNASRCVAAMWLNRPELASRYTKQMYNELKDQMFADTVKESVYYASCLTMYRFNLLVSNSTIPK NMKRFKWHMLTLARAAICGGGEIVPLNSRQAERSALRVIEVMGQHGAAATEVFARIVAVCQGLGDVTADRLKRQTVLQEL LAGLGKPAVDAN
Sequences:
>Translated_572_residues MHRIIQSHLASFVTSFGLEADDEATQFEKFSSHCILSSFYAGEFDLDDVVTSTGDDGIDAVAVVIDEMVTTSAEDAAAPF QTARRNHDVDFVFIQAKRSEGFDLGEFLKFKEGILRFVNQTPYAATDEVLVEARATFELVVREVPKLRNGRPTLTARFVT TGQYQKPDALETALRDFVGQLTELGLFHSIDVKFVDRDELTKLWVGTYSGVEASLPLFSQAALPNIRGIDEAYLAVVKAS DFVDNLLVTSEGGLRTHVFEENVRSFLGEDNTVNASIAATLASDSSSRFPVLNNGITIVCPDIKLQGTTLHLFNYQIVNG CQTSNVLFRHREALGDVMVNIKVVKTQHEDVFAELVRATNSQSKVEDAQFLSLKPIVRNVEHYFNSYDGAESRLYLERRD RQFVGMEVPAIRIFTLNNASRCVAAMWLNRPELASRYTKQMYNELKDQMFADTVKESVYYASCLTMYRFNLLVSNSTIPK NMKRFKWHMLTLARAAICGGGEIVPLNSRQAERSALRVIEVMGQHGAAATEVFARIVAVCQGLGDVTADRLKRQTVLQEL LAGLGKPAVDAN >Mature_572_residues MHRIIQSHLASFVTSFGLEADDEATQFEKFSSHCILSSFYAGEFDLDDVVTSTGDDGIDAVAVVIDEMVTTSAEDAAAPF QTARRNHDVDFVFIQAKRSEGFDLGEFLKFKEGILRFVNQTPYAATDEVLVEARATFELVVREVPKLRNGRPTLTARFVT TGQYQKPDALETALRDFVGQLTELGLFHSIDVKFVDRDELTKLWVGTYSGVEASLPLFSQAALPNIRGIDEAYLAVVKAS DFVDNLLVTSEGGLRTHVFEENVRSFLGEDNTVNASIAATLASDSSSRFPVLNNGITIVCPDIKLQGTTLHLFNYQIVNG CQTSNVLFRHREALGDVMVNIKVVKTQHEDVFAELVRATNSQSKVEDAQFLSLKPIVRNVEHYFNSYDGAESRLYLERRD RQFVGMEVPAIRIFTLNNASRCVAAMWLNRPELASRYTKQMYNELKDQMFADTVKESVYYASCLTMYRFNLLVSNSTIPK NMKRFKWHMLTLARAAICGGGEIVPLNSRQAERSALRVIEVMGQHGAAATEVFARIVAVCQGLGDVTADRLKRQTVLQEL LAGLGKPAVDAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63682; Mature: 63682
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRIIQSHLASFVTSFGLEADDEATQFEKFSSHCILSSFYAGEFDLDDVVTSTGDDGIDA CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHH VAVVIDEMVTTSAEDAAAPFQTARRNHDVDFVFIQAKRSEGFDLGEFLKFKEGILRFVNQ HHHHHHHHHHCCCHHHCCCHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHC TPYAATDEVLVEARATFELVVREVPKLRNGRPTLTARFVTTGQYQKPDALETALRDFVGQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH LTELGLFHSIDVKFVDRDELTKLWVGTYSGVEASLPLFSQAALPNIRGIDEAYLAVVKAS HHHHCCEEECCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH DFVDNLLVTSEGGLRTHVFEENVRSFLGEDNTVNASIAATLASDSSSRFPVLNNGITIVC HHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEECCCEEEEE PDIKLQGTTLHLFNYQIVNGCQTSNVLFRHREALGDVMVNIKVVKTQHEDVFAELVRATN CCEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHHHHHHCC SQSKVEDAQFLSLKPIVRNVEHYFNSYDGAESRLYLERRDRQFVGMEVPAIRIFTLNNAS CCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCEEECEECCEEEEEEECCHH RCVAAMWLNRPELASRYTKQMYNELKDQMFADTVKESVYYASCLTMYRFNLLVSNSTIPK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH NMKRFKWHMLTLARAAICGGGEIVPLNSRQAERSALRVIEVMGQHGAAATEVFARIVAVC HHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QGLGDVTADRLKRQTVLQELLAGLGKPAVDAN HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHRIIQSHLASFVTSFGLEADDEATQFEKFSSHCILSSFYAGEFDLDDVVTSTGDDGIDA CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHH VAVVIDEMVTTSAEDAAAPFQTARRNHDVDFVFIQAKRSEGFDLGEFLKFKEGILRFVNQ HHHHHHHHHHCCCHHHCCCHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHC TPYAATDEVLVEARATFELVVREVPKLRNGRPTLTARFVTTGQYQKPDALETALRDFVGQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH LTELGLFHSIDVKFVDRDELTKLWVGTYSGVEASLPLFSQAALPNIRGIDEAYLAVVKAS HHHHCCEEECCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH DFVDNLLVTSEGGLRTHVFEENVRSFLGEDNTVNASIAATLASDSSSRFPVLNNGITIVC HHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEECCCEEEEE PDIKLQGTTLHLFNYQIVNGCQTSNVLFRHREALGDVMVNIKVVKTQHEDVFAELVRATN CCEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHHHHHHCC SQSKVEDAQFLSLKPIVRNVEHYFNSYDGAESRLYLERRDRQFVGMEVPAIRIFTLNNAS CCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCEEECEECCEEEEEEECCHH RCVAAMWLNRPELASRYTKQMYNELKDQMFADTVKESVYYASCLTMYRFNLLVSNSTIPK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH NMKRFKWHMLTLARAAICGGGEIVPLNSRQAERSALRVIEVMGQHGAAATEVFARIVAVC HHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QGLGDVTADRLKRQTVLQELLAGLGKPAVDAN HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA