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The map label for this gene is treC [H]

Identifier: 34498754

GI number: 34498754

Start: 3590511

End: 3592160

Strand: Reverse

Name: treC [H]

Synonym: CV_3299

Alternate gene names: 34498754

Gene position: 3592160-3590511 (Counterclockwise)

Preceding gene: 34498755

Following gene: 34498753

Centisome position: 75.61

GC content: 66.61

Gene sequence:

>1650_bases
ATGTCTAAGGACATGAAACGGGCGGTGGTGTACCAGATCTACCCCAAGAGCTTCAGCAGCCATCGCAATCAGGCGACGGG
GGATCTCCTGGGCGTGGTGGACCGGCTGGACTACCTGGCCTGGCTGGGCGTCGACTACCTGTGGCTGACGCCGTTCTACC
GCTCGCCGCAGCGCGACAACGGCTACGACGTCAGCGACTACTACAGCATCGACCCGGCTTATGGCGAGATGGAAGACTTC
GAATTGCTGCTGGCCGAGGCCAAGCGGCGCGGCATCGGCGTGATGCTGGACATCGTGGTCAACCACACCTCCACCGAGCA
CGCCTGGTTCCAGGAGGCTCGCAAGGGCAGGGACAATCCCTACCGCGACTTCTACATCTGGCGCGACGCGCCGAACAACT
GGCAGTCCAAGTTCGGCGGCAGCGCCTGGGAGTGGGACGAGGCCAGCGGCCAGTACTACCTGCACCTGTTCGACAAGACC
CAGGCCGACCTCAACTGGGAGAATCCGGCGGTGCGGGCCGAGGTGTACAAGATGATGCGCTTCTGGCGCGACAAGGGCGT
GGCCGGCTTCCGCCTGGACGTGATCAACCTGATCTCCAAGGACCCGGCCTTCTCCGAGGACGACAGCGACGGCCGCCACT
TCTACACCGACGGCCCGCGCGTGCACCAGCATCTGCAGGAGATGCACCGCGAGGTGTTCGACGGCCATGACTTGCTGACC
GTGGGCGAGATGTCGTCCACCTCGTTGGAGCACTGCATCGCCTACAGCCGGCCGGACCGGCGCGAGCTGAGCATGACCTT
CAATTTCCACCACCTGAAGGTGGATTACCCGGATGGCGAGAAATGGCGGCCGGGCGCGGTGGACTTCATCGCGCTCAAGC
GCATCCTGTCCGACTGGCAAACCGGCATGCACGCCGGCGGCGGCTGGAACGCGCTGTTCTGGTGCAACCACGACCAGCCG
CGCGCGCTGTCCCGCTTCGGCGACGACGGCCGCTGGCGGACCGAATCCGCCAAGATGCTGGCCACCGCGCTGCACGGCCT
GCAGGGCACGCCTTATATCTACCAGGGCGAGGAGATCGCCATGGCCAATCCCGGTTTCGCCGACATCGGCCAGCTGCGCG
ACGTGGAAAGCCTGAACGCTTATCGCCAGTTGCTGGCCGAGGGCTTCACCGCTGCCGACGCGATGGCGGTGATCCGCCAG
CGCTCGCGCGACAACGCCCGCACGCCGATGCAGTGGGACGACGGCCCGAACGCCGGCTTCAGCGCCGCCGAGCCCTGGAT
AGGCGTGGCGGCGGACGCCGGCAGCGTCAATGTCGCCACGGCCATCGGCGACCCCAACTCCACGGCACACCACTACCGTC
GGCTGATCCAGCTGCGCAAGCAATACCGGGTGTTCGCCGACGGCGACTACCGCTGCCTGACGCCCGATCATCCCAGCCTG
TGGATTTACACCCGCCGCTGCGCCGACGAAATGCTGCTGGCCATCAGCCACTTCGGCGCCGACGACAGCCATTACGCGCT
GCCGGCCGGCGCGATGCCCGAGGGCTGGACGATGGAACTGCTGCTGTCCAACTACCCGCCGCAGCCCCCTGGCCGATTGC
GGCCCTGGCATTCGCTGCTGTACCGGGCGACGCCGCCGGCCGCGACCTAA

Upstream 100 bases:

>100_bases
CTGGCGGGCACCCTGGTGGCCTTGGCCCTGCCCTTCGGCCTGACCTGGCTGCTGGCGCGCCGCCAGCTGGCCGCTGCCGC
TCAAGAGGAGGCCGCGCAAA

Downstream 100 bases:

>100_bases
ACGCGCCTATACCCGAACACCTCCTCATGCCGGCCGACAGGCCGGCAGGGCGGAGCTTTGCCCGCGCGACGGGCGTGAAC
ATGCATTGGGACAAGGAGAC

Product: a,a-phosphotrehalase

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MSKDMKRAVVYQIYPKSFSSHRNQATGDLLGVVDRLDYLAWLGVDYLWLTPFYRSPQRDNGYDVSDYYSIDPAYGEMEDF
ELLLAEAKRRGIGVMLDIVVNHTSTEHAWFQEARKGRDNPYRDFYIWRDAPNNWQSKFGGSAWEWDEASGQYYLHLFDKT
QADLNWENPAVRAEVYKMMRFWRDKGVAGFRLDVINLISKDPAFSEDDSDGRHFYTDGPRVHQHLQEMHREVFDGHDLLT
VGEMSSTSLEHCIAYSRPDRRELSMTFNFHHLKVDYPDGEKWRPGAVDFIALKRILSDWQTGMHAGGGWNALFWCNHDQP
RALSRFGDDGRWRTESAKMLATALHGLQGTPYIYQGEEIAMANPGFADIGQLRDVESLNAYRQLLAEGFTAADAMAVIRQ
RSRDNARTPMQWDDGPNAGFSAAEPWIGVAADAGSVNVATAIGDPNSTAHHYRRLIQLRKQYRVFADGDYRCLTPDHPSL
WIYTRRCADEMLLAISHFGADDSHYALPAGAMPEGWTMELLLSNYPPQPPGRLRPWHSLLYRATPPAAT

Sequences:

>Translated_549_residues
MSKDMKRAVVYQIYPKSFSSHRNQATGDLLGVVDRLDYLAWLGVDYLWLTPFYRSPQRDNGYDVSDYYSIDPAYGEMEDF
ELLLAEAKRRGIGVMLDIVVNHTSTEHAWFQEARKGRDNPYRDFYIWRDAPNNWQSKFGGSAWEWDEASGQYYLHLFDKT
QADLNWENPAVRAEVYKMMRFWRDKGVAGFRLDVINLISKDPAFSEDDSDGRHFYTDGPRVHQHLQEMHREVFDGHDLLT
VGEMSSTSLEHCIAYSRPDRRELSMTFNFHHLKVDYPDGEKWRPGAVDFIALKRILSDWQTGMHAGGGWNALFWCNHDQP
RALSRFGDDGRWRTESAKMLATALHGLQGTPYIYQGEEIAMANPGFADIGQLRDVESLNAYRQLLAEGFTAADAMAVIRQ
RSRDNARTPMQWDDGPNAGFSAAEPWIGVAADAGSVNVATAIGDPNSTAHHYRRLIQLRKQYRVFADGDYRCLTPDHPSL
WIYTRRCADEMLLAISHFGADDSHYALPAGAMPEGWTMELLLSNYPPQPPGRLRPWHSLLYRATPPAAT
>Mature_548_residues
SKDMKRAVVYQIYPKSFSSHRNQATGDLLGVVDRLDYLAWLGVDYLWLTPFYRSPQRDNGYDVSDYYSIDPAYGEMEDFE
LLLAEAKRRGIGVMLDIVVNHTSTEHAWFQEARKGRDNPYRDFYIWRDAPNNWQSKFGGSAWEWDEASGQYYLHLFDKTQ
ADLNWENPAVRAEVYKMMRFWRDKGVAGFRLDVINLISKDPAFSEDDSDGRHFYTDGPRVHQHLQEMHREVFDGHDLLTV
GEMSSTSLEHCIAYSRPDRRELSMTFNFHHLKVDYPDGEKWRPGAVDFIALKRILSDWQTGMHAGGGWNALFWCNHDQPR
ALSRFGDDGRWRTESAKMLATALHGLQGTPYIYQGEEIAMANPGFADIGQLRDVESLNAYRQLLAEGFTAADAMAVIRQR
SRDNARTPMQWDDGPNAGFSAAEPWIGVAADAGSVNVATAIGDPNSTAHHYRRLIQLRKQYRVFADGDYRCLTPDHPSLW
IYTRRCADEMLLAISHFGADDSHYALPAGAMPEGWTMELLLSNYPPQPPGRLRPWHSLLYRATPPAAT

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=523, Percent_Identity=29.6367112810707, Blast_Score=230, Evalue=2e-60,
Organism=Escherichia coli, GI1790687, Length=544, Percent_Identity=56.6176470588235, Blast_Score=613, Evalue=1e-176,
Organism=Escherichia coli, GI1786604, Length=187, Percent_Identity=27.807486631016, Blast_Score=73, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI25147709, Length=477, Percent_Identity=25.1572327044025, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI32565753, Length=227, Percent_Identity=25.9911894273128, Blast_Score=79, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6322245, Length=574, Percent_Identity=34.8432055749129, Blast_Score=349, Evalue=7e-97,
Organism=Saccharomyces cerevisiae, GI6321726, Length=575, Percent_Identity=35.4782608695652, Blast_Score=342, Evalue=1e-94,
Organism=Saccharomyces cerevisiae, GI6324416, Length=582, Percent_Identity=35.5670103092784, Blast_Score=332, Evalue=7e-92,
Organism=Saccharomyces cerevisiae, GI6322241, Length=582, Percent_Identity=35.5670103092784, Blast_Score=332, Evalue=1e-91,
Organism=Saccharomyces cerevisiae, GI6322021, Length=582, Percent_Identity=35.5670103092784, Blast_Score=332, Evalue=1e-91,
Organism=Saccharomyces cerevisiae, GI6321731, Length=577, Percent_Identity=34.8353552859619, Blast_Score=326, Evalue=5e-90,
Organism=Saccharomyces cerevisiae, GI6319776, Length=577, Percent_Identity=34.6620450606586, Blast_Score=325, Evalue=1e-89,
Organism=Drosophila melanogaster, GI221330053, Length=496, Percent_Identity=35.0806451612903, Blast_Score=259, Evalue=4e-69,
Organism=Drosophila melanogaster, GI24586599, Length=533, Percent_Identity=30.7692307692308, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24586593, Length=564, Percent_Identity=31.9148936170213, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24586597, Length=501, Percent_Identity=32.5349301397206, Blast_Score=241, Evalue=8e-64,
Organism=Drosophila melanogaster, GI45549022, Length=535, Percent_Identity=33.0841121495327, Blast_Score=240, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24583747, Length=492, Percent_Identity=34.7560975609756, Blast_Score=238, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24583749, Length=492, Percent_Identity=34.7560975609756, Blast_Score=238, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24586591, Length=496, Percent_Identity=33.6693548387097, Blast_Score=238, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24583745, Length=496, Percent_Identity=34.6774193548387, Blast_Score=234, Evalue=9e-62,
Organism=Drosophila melanogaster, GI24586589, Length=521, Percent_Identity=33.0134357005758, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24586587, Length=533, Percent_Identity=30.7692307692308, Blast_Score=225, Evalue=7e-59,
Organism=Drosophila melanogaster, GI281360393, Length=511, Percent_Identity=30.9197651663405, Blast_Score=197, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 62810; Mature: 62679

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDMKRAVVYQIYPKSFSSHRNQATGDLLGVVDRLDYLAWLGVDYLWLTPFYRSPQRDN
CCCHHCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
GYDVSDYYSIDPAYGEMEDFELLLAEAKRRGIGVMLDIVVNHTSTEHAWFQEARKGRDNP
CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCCC
YRDFYIWRDAPNNWQSKFGGSAWEWDEASGQYYLHLFDKTQADLNWENPAVRAEVYKMMR
CCEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
FWRDKGVAGFRLDVINLISKDPAFSEDDSDGRHFYTDGPRVHQHLQEMHREVFDGHDLLT
HHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEE
VGEMSSTSLEHCIAYSRPDRRELSMTFNFHHLKVDYPDGEKWRPGAVDFIALKRILSDWQ
ECCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
TGMHAGGGWNALFWCNHDQPRALSRFGDDGRWRTESAKMLATALHGLQGTPYIYQGEEIA
HCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCEEECCCEEE
MANPGFADIGQLRDVESLNAYRQLLAEGFTAADAMAVIRQRSRDNARTPMQWDDGPNAGF
ECCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SAAEPWIGVAADAGSVNVATAIGDPNSTAHHYRRLIQLRKQYRVFADGDYRCLTPDHPSL
CCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCE
WIYTRRCADEMLLAISHFGADDSHYALPAGAMPEGWTMELLLSNYPPQPPGRLRPWHSLL
EEEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEHHHCCCCCCCCCCCHHHHHH
YRATPPAAT
EECCCCCCC
>Mature Secondary Structure 
SKDMKRAVVYQIYPKSFSSHRNQATGDLLGVVDRLDYLAWLGVDYLWLTPFYRSPQRDN
CCHHCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
GYDVSDYYSIDPAYGEMEDFELLLAEAKRRGIGVMLDIVVNHTSTEHAWFQEARKGRDNP
CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCCC
YRDFYIWRDAPNNWQSKFGGSAWEWDEASGQYYLHLFDKTQADLNWENPAVRAEVYKMMR
CCEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
FWRDKGVAGFRLDVINLISKDPAFSEDDSDGRHFYTDGPRVHQHLQEMHREVFDGHDLLT
HHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEE
VGEMSSTSLEHCIAYSRPDRRELSMTFNFHHLKVDYPDGEKWRPGAVDFIALKRILSDWQ
ECCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
TGMHAGGGWNALFWCNHDQPRALSRFGDDGRWRTESAKMLATALHGLQGTPYIYQGEEIA
HCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCEEECCCEEE
MANPGFADIGQLRDVESLNAYRQLLAEGFTAADAMAVIRQRSRDNARTPMQWDDGPNAGF
ECCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SAAEPWIGVAADAGSVNVATAIGDPNSTAHHYRRLIQLRKQYRVFADGDYRCLTPDHPSL
CCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCE
WIYTRRCADEMLLAISHFGADDSHYALPAGAMPEGWTMELLLSNYPPQPPGRLRPWHSLL
EEEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEHHHCCCCCCCCCCCHHHHHH
YRATPPAAT
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7651129; 8969503; 9384377; 7751281 [H]