Click here to switch to the map view.

The map label for this gene is vioA

Identifier: 34498729

GI number: 34498729

Start: 3565032

End: 3566288

Strand: Reverse

Name: vioA

Synonym: CV_3274

Alternate gene names: 34498729

Gene position: 3566288-3565032 (Counterclockwise)

Preceding gene: 34498730

Following gene: 34498728

Centisome position: 75.06

GC content: 64.36

Gene sequence:

>1257_bases
ATGAAGCATTCTTCCGATATCTGCATTGTCGGCGCCGGCATCAGCGGCCTGACCTGCGCCAGCCATCTGCTCGACTCGCC
CGCTTGCCGCGGCCTGTCGCTGCGCATCTTCGACATGCAGCAGGAGGCGGGCGGCCGCATCCGCTCGAAGATGCTGGATG
GCAAGGCGTCGATAGAGCTGGGCGCGGGGCGATACTCCCCGCAGCTGCACCCGCATTTCCAGAGCGCGATGCAGCATTAC
AGCCAGAAGAGCGAGGTGTATCCGTTCACCCAGCTGAAATTCAAGAGCCATGTCCAGCAGAAGCTGAAGCGGGCGATGAA
CGAGTTGTCGCCCAGGCTGAAAGAGCATGGCAAGGAATCCTTTCTCCAGTTCGTCAGCCGCTACCAGGGCCATGACAGCG
CGGTGGGCATGATCCGCTCCATGGGCTACGACGCGCTGTTCCTGCCCGACATCTCGGCCGAGATGGCCTACGACATCGTC
GGCAAGCACCCGGAAATCCAGAGCGTGACCGATAACGACGCCAACCAGTGGTTCGCGGCGGAAACGGGCTTTGCGGGCCT
GATCCAGGGCATCAAGGCCAAGGTCAAGGCTGCCGGCGCGCGCTTCAGCCTGGGTTACCGGCTGCTGTCGGTGAGGACGG
ACGGCGACGGCTACCTGCTGCAACTGGCCGGCGACGACGGCTGGAAGCTGGAACACCGGACCCGCCATCTGATCCTGGCC
ATTCCTCCGTCGGCGATGGCCGGGCTCAATGTCGACTTCCCCGAGGCGTGGAGCGGCGCGCGCTACGGCTCGCTGCCGCT
GTTCAAGGGTTTCCTCACCTACGGCGAGCCATGGTGGCTGGACTACAAGCTGGACGACCAGGTGCTGATCGTCGACAACC
CGCTGCGCAAGATCTACTTCAAGGGCGACAAGTACCTGTTCTTCTACACCGACAGCGAGATGGCCAATTACTGGCGCGGC
TGCGTGGCCGAAGGAGAGGACGGCTACCTGGAGCAGATCCGCACCCATCTGGCCAGCGCGCTGGGCATCGTTCGCGAGCG
CATTCCCCAGCCCCTCGCCCATGTGCACAAGTATTGGGCGCATGGCGTGGAGTTCTGCCGCGACAGCGATATCGACCATC
CGTCCGCGCTCAGCCACCGCGACAGCGGCATCATCGCCTGTTCGGACGCCTACACCGAGCACTGCGGCTGGATGGAGGGC
GGCCTGCTCAGCGCCCGCGAAGCCAGCCGTCTGCTGCTGCAGCGCATCGCCGCGTGA

Upstream 100 bases:

>100_bases
CCCGATTCCAAGGCGCGAGTGCCGTAGGTTTTCGCCGCCCATGCCCGTCCGCCGTTGCCGCGCGGCGGGCGTGAGTTGAC
TAGTCAAAAGGACATTCGCG

Downstream 100 bases:

>100_bases
ACGGTCCGGCCGCCGCATCGCGTCGCCGCCCGGTTCCGGGCGGCGCTTGTCAGCCATGACCGTTCGGGAAACACATGAGC
ATTCTGGATTTTCCACGCAT

Product: vioA - tryptophan 2-monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MKHSSDICIVGAGISGLTCASHLLDSPACRGLSLRIFDMQQEAGGRIRSKMLDGKASIELGAGRYSPQLHPHFQSAMQHY
SQKSEVYPFTQLKFKSHVQQKLKRAMNELSPRLKEHGKESFLQFVSRYQGHDSAVGMIRSMGYDALFLPDISAEMAYDIV
GKHPEIQSVTDNDANQWFAAETGFAGLIQGIKAKVKAAGARFSLGYRLLSVRTDGDGYLLQLAGDDGWKLEHRTRHLILA
IPPSAMAGLNVDFPEAWSGARYGSLPLFKGFLTYGEPWWLDYKLDDQVLIVDNPLRKIYFKGDKYLFFYTDSEMANYWRG
CVAEGEDGYLEQIRTHLASALGIVRERIPQPLAHVHKYWAHGVEFCRDSDIDHPSALSHRDSGIIACSDAYTEHCGWMEG
GLLSAREASRLLLQRIAA

Sequences:

>Translated_418_residues
MKHSSDICIVGAGISGLTCASHLLDSPACRGLSLRIFDMQQEAGGRIRSKMLDGKASIELGAGRYSPQLHPHFQSAMQHY
SQKSEVYPFTQLKFKSHVQQKLKRAMNELSPRLKEHGKESFLQFVSRYQGHDSAVGMIRSMGYDALFLPDISAEMAYDIV
GKHPEIQSVTDNDANQWFAAETGFAGLIQGIKAKVKAAGARFSLGYRLLSVRTDGDGYLLQLAGDDGWKLEHRTRHLILA
IPPSAMAGLNVDFPEAWSGARYGSLPLFKGFLTYGEPWWLDYKLDDQVLIVDNPLRKIYFKGDKYLFFYTDSEMANYWRG
CVAEGEDGYLEQIRTHLASALGIVRERIPQPLAHVHKYWAHGVEFCRDSDIDHPSALSHRDSGIIACSDAYTEHCGWMEG
GLLSAREASRLLLQRIAA
>Mature_418_residues
MKHSSDICIVGAGISGLTCASHLLDSPACRGLSLRIFDMQQEAGGRIRSKMLDGKASIELGAGRYSPQLHPHFQSAMQHY
SQKSEVYPFTQLKFKSHVQQKLKRAMNELSPRLKEHGKESFLQFVSRYQGHDSAVGMIRSMGYDALFLPDISAEMAYDIV
GKHPEIQSVTDNDANQWFAAETGFAGLIQGIKAKVKAAGARFSLGYRLLSVRTDGDGYLLQLAGDDGWKLEHRTRHLILA
IPPSAMAGLNVDFPEAWSGARYGSLPLFKGFLTYGEPWWLDYKLDDQVLIVDNPLRKIYFKGDKYLFFYTDSEMANYWRG
CVAEGEDGYLEQIRTHLASALGIVRERIPQPLAHVHKYWAHGVEFCRDSDIDHPSALSHRDSGIIACSDAYTEHCGWMEG
GLLSAREASRLLLQRIAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavin monoamine oxidase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VIOA_CHRVO (Q9S3V1)

Other databases:

- EMBL:   AF172851
- EMBL:   AB032799
- EMBL:   AE016825
- RefSeq:   NP_902944.1
- ProteinModelPortal:   Q9S3V1
- GeneID:   2547942
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_3274
- NMPDR:   fig|243365.1.peg.3274
- BioCyc:   CVIO243365:CV_3274-MONOMER
- InterPro:   IPR002937

Pfam domain/function: PF01593 Amino_oxidase

EC number: NA

Molecular weight: Translated: 46749; Mature: 46749

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSSDICIVGAGISGLTCASHLLDSPACRGLSLRIFDMQQEAGGRIRSKMLDGKASIEL
CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHCCCCCEEE
GAGRYSPQLHPHFQSAMQHYSQKSEVYPFTQLKFKSHVQQKLKRAMNELSPRLKEHGKES
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
FLQFVSRYQGHDSAVGMIRSMGYDALFLPDISAEMAYDIVGKHPEIQSVTDNDANQWFAA
HHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEC
ETGFAGLIQGIKAKVKAAGARFSLGYRLLSVRTDGDGYLLQLAGDDGWKLEHRTRHLILA
CCCHHHHHHHHHHHHHHCCCEEEECEEEEEEEECCCCEEEEEECCCCCEECCCCCEEEEE
IPPSAMAGLNVDFPEAWSGARYGSLPLFKGFLTYGEPWWLDYKLDDQVLIVDNPLRKIYF
ECCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEE
KGDKYLFFYTDSEMANYWRGCVAEGEDGYLEQIRTHLASALGIVRERIPQPLAHVHKYWA
CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HGVEFCRDSDIDHPSALSHRDSGIIACSDAYTEHCGWMEGGLLSAREASRLLLQRIAA
HHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHSSDICIVGAGISGLTCASHLLDSPACRGLSLRIFDMQQEAGGRIRSKMLDGKASIEL
CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHCCCCCEEE
GAGRYSPQLHPHFQSAMQHYSQKSEVYPFTQLKFKSHVQQKLKRAMNELSPRLKEHGKES
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
FLQFVSRYQGHDSAVGMIRSMGYDALFLPDISAEMAYDIVGKHPEIQSVTDNDANQWFAA
HHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEC
ETGFAGLIQGIKAKVKAAGARFSLGYRLLSVRTDGDGYLLQLAGDDGWKLEHRTRHLILA
CCCHHHHHHHHHHHHHHCCCEEEECEEEEEEEECCCCEEEEEECCCCCEECCCCCEEEEE
IPPSAMAGLNVDFPEAWSGARYGSLPLFKGFLTYGEPWWLDYKLDDQVLIVDNPLRKIYF
ECCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEE
KGDKYLFFYTDSEMANYWRGCVAEGEDGYLEQIRTHLASALGIVRERIPQPLAHVHKYWA
CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HGVEFCRDSDIDHPSALSHRDSGIIACSDAYTEHCGWMEGGLLSAREASRLLLQRIAA
HHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11075927; 14500782