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The map label for this gene is nahR [H]

Identifier: 34498694

GI number: 34498694

Start: 3519683

End: 3520615

Strand: Direct

Name: nahR [H]

Synonym: CV_3239

Alternate gene names: 34498694

Gene position: 3519683-3520615 (Clockwise)

Preceding gene: 34498693

Following gene: 34498695

Centisome position: 74.08

GC content: 67.2

Gene sequence:

>933_bases
ATGTCCCCTCCCCTGAATCTGAACCTGCTGCGCTCGCTGGAGGCGCTGCTGGAAACGCGCAACCTCACCCGCTCCGCCGC
CAGGCTGGGCCTGACCCAGTCGGCGATGAGCCGCCACCTGGTGCAGCTGCGCGCGCAGTTCCAGGATCCGCTGCTGCTGC
GCGAGGGGCAGCGCTTCGTGCTGACCGAGCGGGCGGAGGAGCTGCGCCTGGGTCTGAAGGCGGTGCTGGAGCAGGTGGAG
CAGCTATACCAGCCGCCGCAGTTCGATCCCTCCGCCTGCGAACGGGAATTCTCCTTCGCCGGCTCCGATTACCTGGCCGA
ATACATGCTGCCGGACATTCTGGACCGGGTGCTGCCGCAGGCACCGGGCATGCGCCTGAAGTTCATCCCCTGGCAGGCCG
GCCGTTTCGACCTGCTGTCGGACGGCGCCGCCGACCTGATCTCCACCATCGCCGACGAGGTGCCGGACAATATCTACGGC
AAATCGCTGGGCCAGGACCAGCCGATGTGCGTGATGGCCGACAACCATCCTTTGCATGACAAACCCGCGCTGGAGCGGGA
CGACTACCTGGCCTGGCCGCACGCGCGCGTCAGCTCCGCCAGCGACAAGGACGGTTTCGTCGACATCCAGCTGGCGCGCA
ATGGCCTGAGCCGCCAAATCCGCATCGCCACGCCCTATTTCGTGTCCGCGCTGAGCATCGTCTCCCGCAGCCAGCTGCTG
CTGACGCTGCCGGAACACCTGGCCGTCCGCTTCCAGCGCCAGTTCCCGGTGCGCGCCAAGCCCCTGCCCTTCATCGACTA
CACCTACCGCTACTGGCTGCTGTGGCACGGCCGGGCGGACAAGGACCCGGCGCACCGCTGGTTCCGCGGCCATGTGTTCG
ACGTGCTGTACCACTCGATCCACGGCGTCAGCAAGTATGCGGGGGACGCATAG

Upstream 100 bases:

>100_bases
CCGCTCCACAATCGACAGATCTAGCAACCCGGCGCGCCGCGCCAGGCGCGGCCATGCACGGCGGCCCGCCGGCGGCCTTG
CCCAAGAATGACGGATGCCC

Downstream 100 bases:

>100_bases
CGGCTATCCGCCGATGGCGGTTCTGCCCGCCGCGTCCGCGCCATAGACTTTGTCCTGATTGTCATCGAGCAAATAAGGAG
AAAGTCATGACCTGGACCAT

Product: transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSPPLNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTERAEELRLGLKAVLEQVE
QLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGMRLKFIPWQAGRFDLLSDGAADLISTIADEVPDNIYG
KSLGQDQPMCVMADNHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLL
LTLPEHLAVRFQRQFPVRAKPLPFIDYTYRYWLLWHGRADKDPAHRWFRGHVFDVLYHSIHGVSKYAGDA

Sequences:

>Translated_310_residues
MSPPLNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTERAEELRLGLKAVLEQVE
QLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGMRLKFIPWQAGRFDLLSDGAADLISTIADEVPDNIYG
KSLGQDQPMCVMADNHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLL
LTLPEHLAVRFQRQFPVRAKPLPFIDYTYRYWLLWHGRADKDPAHRWFRGHVFDVLYHSIHGVSKYAGDA
>Mature_309_residues
SPPLNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTERAEELRLGLKAVLEQVEQ
LYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGMRLKFIPWQAGRFDLLSDGAADLISTIADEVPDNIYGK
SLGQDQPMCVMADNHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLLL
TLPEHLAVRFQRQFPVRAKPLPFIDYTYRYWLLWHGRADKDPAHRWFRGHVFDVLYHSIHGVSKYAGDA

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=295, Percent_Identity=26.4406779661017, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790147, Length=303, Percent_Identity=25.0825082508251, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35375; Mature: 35244

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPLNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEE
LTERAEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQ
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
APGMRLKFIPWQAGRFDLLSDGAADLISTIADEVPDNIYGKSLGQDQPMCVMADNHPLHD
CCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCCCCCC
KPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLL
CCCCCCCCEEECCCHHCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHE
LTLPEHLAVRFQRQFPVRAKPLPFIDYTYRYWLLWHGRADKDPAHRWFRGHVFDVLYHSI
EECHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
HGVSKYAGDA
HHHHHHCCCC
>Mature Secondary Structure 
SPPLNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEE
LTERAEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQ
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
APGMRLKFIPWQAGRFDLLSDGAADLISTIADEVPDNIYGKSLGQDQPMCVMADNHPLHD
CCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCCCCCC
KPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLL
CCCCCCCCEEECCCHHCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHE
LTLPEHLAVRFQRQFPVRAKPLPFIDYTYRYWLLWHGRADKDPAHRWFRGHVFDVLYHSI
EECHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
HGVSKYAGDA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]