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The map label for this gene is 34498678

Identifier: 34498678

GI number: 34498678

Start: 3505312

End: 3505947

Strand: Reverse

Name: 34498678

Synonym: CV_3223

Alternate gene names: NA

Gene position: 3505947-3505312 (Counterclockwise)

Preceding gene: 34498690

Following gene: 34498676

Centisome position: 73.79

GC content: 63.68

Gene sequence:

>636_bases
ATGGGTATATTAGGCAGGCTCAGCTTCAAGGACCAGGCCTTCAAGCTGCGCGAGCAAGCCGTGCTGGACGCCACGACGCG
GATGCTGGCGAGCAAGGGTTTCGACCTGATGACCATGGACGATGTGGCCGGCGAAGCGGGGATTTCCAAGCCCAGCCTGT
ACAAGCATTTCAAATCCAAGGATGAGCTGGCGACCGAGGTGATGATCCGCTTGCTGGACGATGCCCAGGATTTTCTGGCG
CGGCAGGCGCCGGAGCTGAGCCCGCTCGCCCGCCTGCGCGATCTCTTGGCCTGGGCGCTGCGGGTGCGCCTCGAGGGCGG
GCTGCCTTTCCTGCCTTCGGCCAGTCCGCAGGTGCGCGCCATGCTGACGCGCAGCCTGCGCTACGTCAGCCGGGCGATCA
AGCTGCACAAAACGCTGCAGGGCATCGTCGAGCAGGCCAAGCGGCAGGGGGAGTTGCGGGCGGATATGCCGACCGACGTG
ATCCTGTACAGCTACTATTCCCGGACCTGCGATCCGGCGGTGGAGTATTTGCGGGTGTATGGGAAATACCCGGATGAAGA
CATCGTCAGGCATATGCTTGAGGTCTGTTTCGACGGCATGTCGGCTGGCCAGCGCCGCGCTGACGGAGACGCGTGA

Upstream 100 bases:

>100_bases
GGTCGGAAATCCACCGGCTTGGCAGTGCGCCGGCGCTGCTTTATATTCAGGATAAAACCGATTTGAAAAAAATGCTACTG
ATCAGTAAAAGGTGTTACCG

Downstream 100 bases:

>100_bases
AGCCGCGGATCAGGGCGCGGCCAGGCTCCGTGCCTGATCGTCTGCCGCCATGCGCAGCAGATCTTGCAGCAGCGGCGGCA
GATACTGCCGCTGCACGGTG

Product: transcription regulator, TetR family

Products: NA

Alternate protein names: Transcription Regulator TetR Family; Transcriptional Regulator TetR Family; Transcriptional Regulator Tetr Family; TetR Family Transcription Regulator Protein; Regulatory Protein TetR

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MGILGRLSFKDQAFKLREQAVLDATTRMLASKGFDLMTMDDVAGEAGISKPSLYKHFKSKDELATEVMIRLLDDAQDFLA
RQAPELSPLARLRDLLAWALRVRLEGGLPFLPSASPQVRAMLTRSLRYVSRAIKLHKTLQGIVEQAKRQGELRADMPTDV
ILYSYYSRTCDPAVEYLRVYGKYPDEDIVRHMLEVCFDGMSAGQRRADGDA

Sequences:

>Translated_211_residues
MGILGRLSFKDQAFKLREQAVLDATTRMLASKGFDLMTMDDVAGEAGISKPSLYKHFKSKDELATEVMIRLLDDAQDFLA
RQAPELSPLARLRDLLAWALRVRLEGGLPFLPSASPQVRAMLTRSLRYVSRAIKLHKTLQGIVEQAKRQGELRADMPTDV
ILYSYYSRTCDPAVEYLRVYGKYPDEDIVRHMLEVCFDGMSAGQRRADGDA
>Mature_210_residues
GILGRLSFKDQAFKLREQAVLDATTRMLASKGFDLMTMDDVAGEAGISKPSLYKHFKSKDELATEVMIRLLDDAQDFLAR
QAPELSPLARLRDLLAWALRVRLEGGLPFLPSASPQVRAMLTRSLRYVSRAIKLHKTLQGIVEQAKRQGELRADMPTDVI
LYSYYSRTCDPAVEYLRVYGKYPDEDIVRHMLEVCFDGMSAGQRRADGDA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23788; Mature: 23657

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILGRLSFKDQAFKLREQAVLDATTRMLASKGFDLMTMDDVAGEAGISKPSLYKHFKSK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCHHHHHHHCCH
DELATEVMIRLLDDAQDFLARQAPELSPLARLRDLLAWALRVRLEGGLPFLPSASPQVRA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
MLTRSLRYVSRAIKLHKTLQGIVEQAKRQGELRADMPTDVILYSYYSRTCDPAVEYLRVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
GKYPDEDIVRHMLEVCFDGMSAGQRRADGDA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GILGRLSFKDQAFKLREQAVLDATTRMLASKGFDLMTMDDVAGEAGISKPSLYKHFKSK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCHHHHHHHCCH
DELATEVMIRLLDDAQDFLARQAPELSPLARLRDLLAWALRVRLEGGLPFLPSASPQVRA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
MLTRSLRYVSRAIKLHKTLQGIVEQAKRQGELRADMPTDVILYSYYSRTCDPAVEYLRVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
GKYPDEDIVRHMLEVCFDGMSAGQRRADGDA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA