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The map label for this gene is fliO [H]

Identifier: 34498583

GI number: 34498583

Start: 3413598

End: 3414020

Strand: Reverse

Name: fliO [H]

Synonym: CV_3128

Alternate gene names: 34498583

Gene position: 3414020-3413598 (Counterclockwise)

Preceding gene: 34498584

Following gene: 34498582

Centisome position: 71.86

GC content: 71.16

Gene sequence:

>423_bases
ATGGCATCTTCGCCGCTGTGGGCGGCGACCGCTACGGCTCCAGCGCCGGTGTCTGCGCCTTCGCCTTCGCCGTTCGCCAG
CCTGCTGCAGGTGATCCTGGGGCTGGCGGTGGTGCTGGGCGCCATCGTCGGCGTGGCCTGGCTGTTCAAGCGCCTGTCGG
GCGGCATGCTCGGCGGCGCGGGCCGTGTCCGCGTCGTGGGCGGCACCATGGTCGGCCAGAAGGAGCGGGTGGTGATCGTC
GAGCTGGAGGGCGAATGGCTGGTGCTGGGCGTGACGCCGCAACAGGTCAATCTGCTCAGCAAGATGCCGCGGCCGGAGGG
CGCGGAGTCGGAGCCGGCTGAACCGGCGGAGCCGTTCGCGCGCTGGCTGAAGGCCGCATTGGACAAGAGCCGCGAGGCGC
AACGGCGCCGGCAGGACAAATGA

Upstream 100 bases:

>100_bases
ACATCATCACCCCGGCAGAGCGGATACGGCGGCTGCAGAAATAATGGACATGGGAAAACGCGTGAAAGTGCGCCTGGCGC
TGCGGGGCGCACTTTGTTTT

Downstream 100 bases:

>100_bases
TGAAGAAAAAGATCGTGATCGCCCTGCTGTCCGGCGGGGCGCTGCTGTCGCCGTTGCTGGCGGACGCCGCGGCGGGCTTG
CCGCTGATGACCAGCACGCC

Product: flagellar protein FliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MASSPLWAATATAPAPVSAPSPSPFASLLQVILGLAVVLGAIVGVAWLFKRLSGGMLGGAGRVRVVGGTMVGQKERVVIV
ELEGEWLVLGVTPQQVNLLSKMPRPEGAESEPAEPAEPFARWLKAALDKSREAQRRRQDK

Sequences:

>Translated_140_residues
MASSPLWAATATAPAPVSAPSPSPFASLLQVILGLAVVLGAIVGVAWLFKRLSGGMLGGAGRVRVVGGTMVGQKERVVIV
ELEGEWLVLGVTPQQVNLLSKMPRPEGAESEPAEPAEPFARWLKAALDKSREAQRRRQDK
>Mature_139_residues
ASSPLWAATATAPAPVSAPSPSPFASLLQVILGLAVVLGAIVGVAWLFKRLSGGMLGGAGRVRVVGGTMVGQKERVVIVE
LEGEWLVLGVTPQQVNLLSKMPRPEGAESEPAEPAEPFARWLKAALDKSREAQRRRQDK

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliO/mopB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781 [H]

Pfam domain/function: PF04347 FliO [H]

EC number: NA

Molecular weight: Translated: 14790; Mature: 14659

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSPLWAATATAPAPVSAPSPSPFASLLQVILGLAVVLGAIVGVAWLFKRLSGGMLGGA
CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GRVRVVGGTMVGQKERVVIVELEGEWLVLGVTPQQVNLLSKMPRPEGAESEPAEPAEPFA
CEEEEECCCEECCCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RWLKAALDKSREAQRRRQDK
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASSPLWAATATAPAPVSAPSPSPFASLLQVILGLAVVLGAIVGVAWLFKRLSGGMLGGA
CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GRVRVVGGTMVGQKERVVIVELEGEWLVLGVTPQQVNLLSKMPRPEGAESEPAEPAEPFA
CEEEEECCCEECCCCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RWLKAALDKSREAQRRRQDK
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]