Click here to switch to the map view.

The map label for this gene is pilW

Identifier: 34498568

GI number: 34498568

Start: 3400000

End: 3400650

Strand: Direct

Name: pilW

Synonym: CV_3113

Alternate gene names: NA

Gene position: 3400000-3400650 (Clockwise)

Preceding gene: 34498567

Following gene: 34498569

Centisome position: 71.56

GC content: 65.75

Gene sequence:

>651_bases
CTGATCGAGGTGATGGTAGCCATCGCCATCGGCCTGGCCTTGCTCGGCATCCTGACCATGATCTTCAGTTCCGTGCGGCT
GACCAAGACCAGCCAGTCCGGCCTGGCCCAGCTGCAGGACAACCAGCGCACGGCGATGACCCTGATCAGCAGCATCGTGC
AATCCGCCGGCTACTACCCCAACCCGCAAACCCAGACCGCGGCGCAAGCGCTGCCGGCCGGAAACGGCTTCGCCGCGGGG
CAGTCGATCATCGGCACGTCTGGCGCGTCAGGCGCGCCGGACACCCTGAGCGTGCGCTTCGCCTCCCAGGTCAATGACAA
CACCCTGAACTGCAACGGCGCCGGCGGCAACGGCCAGATCTACATCAATCAATTTGCCGTCAACGGCTCGAAACAGCTCA
CCTGCGCGGTCAACGGCGGAACCGCCCAGGTGCTGGTGGACGGCGTCAGCGGCATGAAGGTGCTGTACGGCGTGGATGAA
ACCGGCGCCGGCTCCACCACCCACTACTACCCGGCCTCCAGCCTGCCGGCCGGCGCCGCCGTGCGCTCGGTGTGGGTGAC
GCTGACCATGATCAATCCGCTGGCCAATCAACCCGGCCAGCAGTCCACGGTGACCATGTCCTGGCTCACCGGCCTGATGA
ACCAGCTATGA

Upstream 100 bases:

>100_bases
GCCGCTCGGTCAACGCCGCCTCGATGACCGCCGCCACGGCCAGCCAGAGCTACCAGATGGTGGTGGTGCCATGAACGCCG
CCCGGCAGCGCGGCAGCGGC

Downstream 100 bases:

>100_bases
AGCGCCATCTCCATCGATCCCGCTGTTGCCGTCCACGCGGCTTCACGCTGATCGCGGCGCTGATGATGCTGATCGTGATC
ACCATCATCGGCATCGCGCT

Product: type 4 fimbrial biogenesis transmembrane protein

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Transmembrane Protein

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIEVMVAIAIGLALLGILTMIFSSVRLTKTSQSGLAQLQDNQRTAMTLISSIVQSAGYYPNPQTQTAAQALPAGNGFAAG
QSIIGTSGASGAPDTLSVRFASQVNDNTLNCNGAGGNGQIYINQFAVNGSKQLTCAVNGGTAQVLVDGVSGMKVLYGVDE
TGAGSTTHYYPASSLPAGAAVRSVWVTLTMINPLANQPGQQSTVTMSWLTGLMNQL

Sequences:

>Translated_216_residues
MIEVMVAIAIGLALLGILTMIFSSVRLTKTSQSGLAQLQDNQRTAMTLISSIVQSAGYYPNPQTQTAAQALPAGNGFAAG
QSIIGTSGASGAPDTLSVRFASQVNDNTLNCNGAGGNGQIYINQFAVNGSKQLTCAVNGGTAQVLVDGVSGMKVLYGVDE
TGAGSTTHYYPASSLPAGAAVRSVWVTLTMINPLANQPGQQSTVTMSWLTGLMNQL
>Mature_216_residues
MIEVMVAIAIGLALLGILTMIFSSVRLTKTSQSGLAQLQDNQRTAMTLISSIVQSAGYYPNPQTQTAAQALPAGNGFAAG
QSIIGTSGASGAPDTLSVRFASQVNDNTLNCNGAGGNGQIYINQFAVNGSKQLTCAVNGGTAQVLVDGVSGMKVLYGVDE
TGAGSTTHYYPASSLPAGAAVRSVWVTLTMINPLANQPGQQSTVTMSWLTGLMNQL

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22148; Mature: 22148

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVMVAIAIGLALLGILTMIFSSVRLTKTSQSGLAQLQDNQRTAMTLISSIVQSAGYYP
CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
NPQTQTAAQALPAGNGFAAGQSIIGTSGASGAPDTLSVRFASQVNDNTLNCNGAGGNGQI
CCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCEE
YINQFAVNGSKQLTCAVNGGTAQVLVDGVSGMKVLYGVDETGAGSTTHYYPASSLPAGAA
EEEEEEECCCCEEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCHHH
VRSVWVTLTMINPLANQPGQQSTVTMSWLTGLMNQL
HHHHHHHEEEECHHHCCCCCCCEEHHHHHHHHHHCC
>Mature Secondary Structure
MIEVMVAIAIGLALLGILTMIFSSVRLTKTSQSGLAQLQDNQRTAMTLISSIVQSAGYYP
CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
NPQTQTAAQALPAGNGFAAGQSIIGTSGASGAPDTLSVRFASQVNDNTLNCNGAGGNGQI
CCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCEE
YINQFAVNGSKQLTCAVNGGTAQVLVDGVSGMKVLYGVDETGAGSTTHYYPASSLPAGAA
EEEEEEECCCCEEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCHHH
VRSVWVTLTMINPLANQPGQQSTVTMSWLTGLMNQL
HHHHHHHEEEECHHHCCCCCCCEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA