| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is terC [C]
Identifier: 34498563
GI number: 34498563
Start: 3395805
End: 3396803
Strand: Reverse
Name: terC [C]
Synonym: CV_3108
Alternate gene names: 34498563
Gene position: 3396803-3395805 (Counterclockwise)
Preceding gene: 34498564
Following gene: 34498562
Centisome position: 71.5
GC content: 65.07
Gene sequence:
>999_bases GTGATCGATTTTCTGACCGCCCCCGCGCTGGGCTATCCGCTGTGGACCTGGCTGGCTTTTCTGGCCGGCGTGCTGGCGCT GCTGGCCTTCGATCTCGGCATCTTGCAGAAGAGCGGCCGCGAGATCGGCGTGCGCGACAGCCTGAAGCTGTCGGCGTTTT ACATCGGCATCGGCCTGGCCTTCGGCGGCTGGGTGTGGTGGTATCGCGGCGCCGACGCCGGCGTGCAGTATTTCACCGGC TATCTGCTGGAGAAGTCGCTGTCTCTCGACAATGTGTTCGTGATTTCGCTGATATTCGGCAGCATGGCCGTGCCGCGCGC CTACCAGCATAGGGTGCTGTTCTGGGGCATTCTGGGCGCCATCCTGATGCGGGCGCTGATGATAGGCGCCGGCGCGGCGC TGGTTGCCGAGTTCCAGTGGGTGCTGCTGCTGTTTGGCATCTTCCTGCTGTGGGCGGGCTTGAAGATGCTGTTTTCCGGC GACGATGAGGCCACGCCGCTTGCGGAGCAGAAGTTCTACCAATGGCTGCGCCGCCGGATGCGGCTGACGCCGGCGCTGCA TGGCAACGCTTTCCTGGTGCGCGGCGAGCGCCACGGGCTGGCCAGGGGCTGGTGGGCGACGCCGCTGCTGCTGACGCTGA TCCTGGTGGAGTCGGCCGACCTGGTGTTCGCGGTGGACAGCATCCCGGCCATTTTCGCGGTGACCCAGGATCCCTTCCTG GTCTACACCTCCAACATCTTCGCCATTCTGGGCCTGCGCGCGCTGTATTTCGCGCTGGCGGCGATGGTGCACCGCTTCCA CTATCTGAAGTACGCGCTGGCGCTGGTGCTGGTGCTGATAGGCGTCAAGGTGGGGCTGGTGTACCTGCACGATGCCGGCC TGGTGGCGTTCAAGCTGCCCACCGCCTGGTCGCTGCTGGCGACGGTATCCCTGCTGGCGGGCGGCATCGTCTATTCCTGG CATCGCACCCGTCTGGAGACGGACAGCGGAACCAATTGA
Upstream 100 bases:
>100_bases CGAGCATGGAGGAGCGCATCGCCGCGCTGGAAGGCCGCGGTTGACGGAGCGGGCGGCGTATCCCGCCGCCCCACATTGAT GAATTGAATGGAGTGTTGAA
Downstream 100 bases:
>100_bases CAGTTCGGTTACTCCAACCTTGAGAACGCGGGCGCCAGAAGATGGCGCCCGCGCCGTTGTCGCGCTTGCAGGCGACACCT TCGTGACCAACTCCCGATAC
Product: TerC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MIDFLTAPALGYPLWTWLAFLAGVLALLAFDLGILQKSGREIGVRDSLKLSAFYIGIGLAFGGWVWWYRGADAGVQYFTG YLLEKSLSLDNVFVISLIFGSMAVPRAYQHRVLFWGILGAILMRALMIGAGAALVAEFQWVLLLFGIFLLWAGLKMLFSG DDEATPLAEQKFYQWLRRRMRLTPALHGNAFLVRGERHGLARGWWATPLLLTLILVESADLVFAVDSIPAIFAVTQDPFL VYTSNIFAILGLRALYFALAAMVHRFHYLKYALALVLVLIGVKVGLVYLHDAGLVAFKLPTAWSLLATVSLLAGGIVYSW HRTRLETDSGTN
Sequences:
>Translated_332_residues MIDFLTAPALGYPLWTWLAFLAGVLALLAFDLGILQKSGREIGVRDSLKLSAFYIGIGLAFGGWVWWYRGADAGVQYFTG YLLEKSLSLDNVFVISLIFGSMAVPRAYQHRVLFWGILGAILMRALMIGAGAALVAEFQWVLLLFGIFLLWAGLKMLFSG DDEATPLAEQKFYQWLRRRMRLTPALHGNAFLVRGERHGLARGWWATPLLLTLILVESADLVFAVDSIPAIFAVTQDPFL VYTSNIFAILGLRALYFALAAMVHRFHYLKYALALVLVLIGVKVGLVYLHDAGLVAFKLPTAWSLLATVSLLAGGIVYSW HRTRLETDSGTN >Mature_332_residues MIDFLTAPALGYPLWTWLAFLAGVLALLAFDLGILQKSGREIGVRDSLKLSAFYIGIGLAFGGWVWWYRGADAGVQYFTG YLLEKSLSLDNVFVISLIFGSMAVPRAYQHRVLFWGILGAILMRALMIGAGAALVAEFQWVLLLFGIFLLWAGLKMLFSG DDEATPLAEQKFYQWLRRRMRLTPALHGNAFLVRGERHGLARGWWATPLLLTLILVESADLVFAVDSIPAIFAVTQDPFL VYTSNIFAILGLRALYFALAAMVHRFHYLKYALALVLVLIGVKVGLVYLHDAGLVAFKLPTAWSLLATVSLLAGGIVYSW HRTRLETDSGTN
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=332, Percent_Identity=41.2650602409639, Blast_Score=220, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 36821; Mature: 36821
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFLTAPALGYPLWTWLAFLAGVLALLAFDLGILQKSGREIGVRDSLKLSAFYIGIGLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH FGGWVWWYRGADAGVQYFTGYLLEKSLSLDNVFVISLIFGSMAVPRAYQHRVLFWGILGA HHHHEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ILMRALMIGAGAALVAEFQWVLLLFGIFLLWAGLKMLFSGDDEATPLAEQKFYQWLRRRM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RLTPALHGNAFLVRGERHGLARGWWATPLLLTLILVESADLVFAVDSIPAIFAVTQDPFL HCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCEE VYTSNIFAILGLRALYFALAAMVHRFHYLKYALALVLVLIGVKVGLVYLHDAGLVAFKLP EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECC TAWSLLATVSLLAGGIVYSWHRTRLETDSGTN HHHHHHHHHHHHHCHHHEEHHHHEECCCCCCC >Mature Secondary Structure MIDFLTAPALGYPLWTWLAFLAGVLALLAFDLGILQKSGREIGVRDSLKLSAFYIGIGLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH FGGWVWWYRGADAGVQYFTGYLLEKSLSLDNVFVISLIFGSMAVPRAYQHRVLFWGILGA HHHHEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ILMRALMIGAGAALVAEFQWVLLLFGIFLLWAGLKMLFSGDDEATPLAEQKFYQWLRRRM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RLTPALHGNAFLVRGERHGLARGWWATPLLLTLILVESADLVFAVDSIPAIFAVTQDPFL HCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCEE VYTSNIFAILGLRALYFALAAMVHRFHYLKYALALVLVLIGVKVGLVYLHDAGLVAFKLP EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECC TAWSLLATVSLLAGGIVYSWHRTRLETDSGTN HHHHHHHHHHHHHCHHHEEHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA