| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498514
Identifier: 34498514
GI number: 34498514
Start: 3338969
End: 3339385
Strand: Reverse
Name: 34498514
Synonym: CV_3059
Alternate gene names: NA
Gene position: 3339385-3338969 (Counterclockwise)
Preceding gene: 34498515
Following gene: 34498513
Centisome position: 70.29
GC content: 67.39
Gene sequence:
>417_bases ATGTACATCCTGGGGGCCTGCCACTGCGGCAATATTTCCTTCGAACTGGACTGGCCGGACGACGACGCCATCCCGGCGCG ACGCTGCGGCTGCGGCTTCTGCCGCAAGCATGGCGGCGTATGGACCGCCTCGCCCGGCGGCAGGCTGGCGGTAACGCTGC GCGATCGCCGGCGGGTATCGCATTACCGTTTCGGCACCGGCACCGCCGATTTCCACATCTGCTCCGATTGCGGCGTCGCG CCGCTGGTCACCAGCGAGATCGGCGGCCGCTTGCACGCCGTGGTCAGCGTCAATGCCTTCGAGACGCCGGATCTGCCGCT GGGCGACGCGGTCGATGTCTCTTTCGATGGCGAAAGCGAAGCGGAAAGGCTGGCGCGCCGCGCCCGCAACTGGATTCCCG ATGTCCGTTTCGCCTGA
Upstream 100 bases:
>100_bases AGGAGACGGCTCGCGGCGCGCGGGCTGTTTTTTATCGGGGGGGAATGTCGGCAAGAGGCTTGGCGGGATGTCTTTTTGCC GTATCTGACAAGGGGAACGC
Downstream 100 bases:
>100_bases TCGTTCCGCCATTGTCCGCCTTGAAGCCTTGCCGTCCGCCGTGTTGGCCGATTTGGCCGCCGGCAGGCGGCCGACGGGTT TGCGCCGCGCTTGCGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MYILGACHCGNISFELDWPDDDAIPARRCGCGFCRKHGGVWTASPGGRLAVTLRDRRRVSHYRFGTGTADFHICSDCGVA PLVTSEIGGRLHAVVSVNAFETPDLPLGDAVDVSFDGESEAERLARRARNWIPDVRFA
Sequences:
>Translated_138_residues MYILGACHCGNISFELDWPDDDAIPARRCGCGFCRKHGGVWTASPGGRLAVTLRDRRRVSHYRFGTGTADFHICSDCGVA PLVTSEIGGRLHAVVSVNAFETPDLPLGDAVDVSFDGESEAERLARRARNWIPDVRFA >Mature_138_residues MYILGACHCGNISFELDWPDDDAIPARRCGCGFCRKHGGVWTASPGGRLAVTLRDRRRVSHYRFGTGTADFHICSDCGVA PLVTSEIGGRLHAVVSVNAFETPDLPLGDAVDVSFDGESEAERLARRARNWIPDVRFA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15063; Mature: 15063
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYILGACHCGNISFELDWPDDDAIPARRCGCGFCRKHGGVWTASPGGRLAVTLRDRRRVS CEEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCEEEEEEECCCCCC HYRFGTGTADFHICSDCGVAPLVTSEIGGRLHAVVSVNAFETPDLPLGDAVDVSFDGESE EEECCCCCCCEEEECCCCCCCEEHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHH AERLARRARNWIPDVRFA HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYILGACHCGNISFELDWPDDDAIPARRCGCGFCRKHGGVWTASPGGRLAVTLRDRRRVS CEEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCEEEEEEECCCCCC HYRFGTGTADFHICSDCGVAPLVTSEIGGRLHAVVSVNAFETPDLPLGDAVDVSFDGESE EEECCCCCCCEEEECCCCCCCEEHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHH AERLARRARNWIPDVRFA HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA