Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498513

Identifier: 34498513

GI number: 34498513

Start: 3338449

End: 3338985

Strand: Reverse

Name: 34498513

Synonym: CV_3058

Alternate gene names: NA

Gene position: 3338985-3338449 (Counterclockwise)

Preceding gene: 34498514

Following gene: 34498512

Centisome position: 70.28

GC content: 70.95

Gene sequence:

>537_bases
ATGTCCGTTTCGCCTGATCGTTCCGCCATTGTCCGCCTTGAAGCCTTGCCGTCCGCCGTGTTGGCCGATTTGGCCGCCGG
CAGGCGGCCGACGGGTTTGCGCCGCGCTTGCGAGGAGGGCGCCTTGCCGCCGCCGGAAGTGGCGAGGCGGGCGCTGCGCT
TGCAGGCTGAGGGCGTGGAGGCGCGCTGGAGCCTGCCTTATGCCATGATCGATGAGGGTGGCGCCCTGGTCGGCGCCTGC
GGCTTCAAGGGACCGCCCAGCCTGGGCGTGGTGGAAATCGGCTATGCGGTGGCGCCCTCGCGGCGCGGGCGCGGCATCGC
CGCCGCCGCCGTGGCGCAATTGCTGCAGAAGGCTGCGGCCGGCGGCGCGCGCCGGGTGCTGGCCAGGATCAATCCGGACA
ATGCCGCGTCGTCCCGGGTGGCGGACAAACTGGGTTTCGTCCGCGGCGAGGTGGCGTTGGACGACGACGGCGAGCCGTTG
GCGCAGTGGCTGTGGCCGGCGGCGATCGATTTTCCCGTTGATGGAGACGCATCATGA

Upstream 100 bases:

>100_bases
GAGACGCCGGATCTGCCGCTGGGCGACGCGGTCGATGTCTCTTTCGATGGCGAAAGCGAAGCGGAAAGGCTGGCGCGCCG
CGCCCGCAACTGGATTCCCG

Downstream 100 bases:

>100_bases
AGCTGATAGGCATGCTGGACTCCCCCTATGTGCGCCGCGTCGCGATTTCCCTGCAATTGCTCGGCCTTCCGTTCGAGCAC
CAGCCCTTGTCGGTGTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSVSPDRSAIVRLEALPSAVLADLAAGRRPTGLRRACEEGALPPPEVARRALRLQAEGVEARWSLPYAMIDEGGALVGAC
GFKGPPSLGVVEIGYAVAPSRRGRGIAAAAVAQLLQKAAAGGARRVLARINPDNAASSRVADKLGFVRGEVALDDDGEPL
AQWLWPAAIDFPVDGDAS

Sequences:

>Translated_178_residues
MSVSPDRSAIVRLEALPSAVLADLAAGRRPTGLRRACEEGALPPPEVARRALRLQAEGVEARWSLPYAMIDEGGALVGAC
GFKGPPSLGVVEIGYAVAPSRRGRGIAAAAVAQLLQKAAAGGARRVLARINPDNAASSRVADKLGFVRGEVALDDDGEPL
AQWLWPAAIDFPVDGDAS
>Mature_177_residues
SVSPDRSAIVRLEALPSAVLADLAAGRRPTGLRRACEEGALPPPEVARRALRLQAEGVEARWSLPYAMIDEGGALVGACG
FKGPPSLGVVEIGYAVAPSRRGRGIAAAAVAQLLQKAAAGGARRVLARINPDNAASSRVADKLGFVRGEVALDDDGEPLA
QWLWPAAIDFPVDGDAS

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18413; Mature: 18282

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSPDRSAIVRLEALPSAVLADLAAGRRPTGLRRACEEGALPPPEVARRALRLQAEGVE
CCCCCCHHHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
ARWSLPYAMIDEGGALVGACGFKGPPSLGVVEIGYAVAPSRRGRGIAAAAVAQLLQKAAA
CEECCCCCEECCCCEEEEECCCCCCCCCCEEEECEEECCCCCCCCHHHHHHHHHHHHHHC
GGARRVLARINPDNAASSRVADKLGFVRGEVALDDDGEPLAQWLWPAAIDFPVDGDAS
CCHHHHHEECCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SVSPDRSAIVRLEALPSAVLADLAAGRRPTGLRRACEEGALPPPEVARRALRLQAEGVE
CCCCCHHHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
ARWSLPYAMIDEGGALVGACGFKGPPSLGVVEIGYAVAPSRRGRGIAAAAVAQLLQKAAA
CEECCCCCEECCCCEEEEECCCCCCCCCCEEEECEEECCCCCCCCHHHHHHHHHHHHHHC
GGARRVLARINPDNAASSRVADKLGFVRGEVALDDDGEPLAQWLWPAAIDFPVDGDAS
CCHHHHHEECCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA