| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is fruA [H]
Identifier: 34498509
GI number: 34498509
Start: 3332748
End: 3334412
Strand: Direct
Name: fruA [H]
Synonym: CV_3054
Alternate gene names: 34498509
Gene position: 3332748-3334412 (Clockwise)
Preceding gene: 34498508
Following gene: 34498510
Centisome position: 70.15
GC content: 71.71
Gene sequence:
>1665_bases ATGAGCATCGTCGCCATCATCCGCGCCCCGGAGCGCAGCACCCAGGCCAGGCTGGCCGCCGAAGCGCTGCGCCAGGCCGC CCAGCGGCAGGGCAAACGGATAGACATCGAGATAGACGGCCAGCCCGCGCTGGGCGCTGACATCCTGCAGGCCGCCAGCC AGATCCTGCTGGTGGACTGTCCCGACGACGCCCGCGCCGGGCAAAAACCCGCGCGCCGCGCCACGCTGGACGCGGTATTG GCCGATCCGGCCGCGCAGCTGGACGGCGCCGCGGCTGCCGAGCGCGCGCTCAGCATCGTCGCCATCACCGGCTGCCCCAC CGGCATCGCCCACACCTTCATGGCGGCCGAGGGGCTGGTCCAGGGCGCCAAGGCGCTGGGCCACGCGATGCGGGTGGAAA CCCAGGGCTCGGTCGGCGCGCAGAACGCGTTGACCGACGCCGAGATCGCCGCCGCCGACTTGGTGGTGATCGCCGCCGAC ACCCAGGTGCAGCTGGACCGCTTCGCCGGCAAACGGCTGTTCAAGAGCGGCACCAAGGCCGCCATCGGCGACGGCAAGGC GCTGATCCGCCGCGCGATAGCGGAGGCGCAGCCCTGGAGCGGCGCGGCCGCGCCCGCCGCCCAGGCCGCCGGCAAGGAGA AAACCAAGGACGGCCCCTATCGCCACCTGATGACCGGCGTGTCCTTCATGCTGCCCTTCGTCACCGCCGGCGGCATCCTG ATCGCGCTCGCCTTCGCGCTGGGCGGCATCTACGCCTTCGACGACGCGCACAAGGGCACGCTGGCCTGGTCGCTGTTCCA GATCGGCGCCAAATCGGCATTCGCGCTGATGGTGCCGATACTGGCCGGCTACATCGCCTACTCCGTCGCCGACCGCCCCG GCATCGCCCCCGGCATGGTGGGCGGCATGCTGGCCGCCAGCCTGGGATCGGGCTTCCTCGGCGGCATCGTCGCCGGCTTC ATCGCAGGCTACGGCACGCGGGAGCTGAACCGCCGCATCCAGCTGGGCCAGCATCTGGACGGCCTGAAGCCGGTGCTGAT CCTGCCGGTGCTGGGCTCGCTGCTGACCGGCCTCTTGATGATCTACGTGGTGGGCCAGCCGGTGGCCGCCGTGCTGGCGG CGCTGACCGACGCGCTGAAGGGCATGCAGGGCAGCAGCGCGCTGGCATTGGGCGCGCTGCTGGGCGCGATGATGGCCTTC GACATGGGCGGCCCGGTCAACAAGGCGGCCTACGCCTTCGCCACCGGCCTGATCGCCAGCCAGGTCTACACGCCGATGGC GGCGGTGATGGCCGCCGGCATGACGCCGCCGCTGGGCATCGCGCTGGCCACCCGCCTGTTCCGAGACCGCTTCACCGTCG ACGAGCATGAGGCCGGCAAGGCTGCCGCCGTGCTGGGCCTGGCCTTCATCAGCGAAGGCGCCATCCCCTTCGCCGCGCGC GATCCTTTCCGCGTGATTCCGGCGCTGATGGCCGGCTCGGCGCTGGCCGGCGCCGTCTCGATGACCATGGGCGTGGAACT GAAAGTGCCGCACGGCGGCGTGTTCGTGCTGCCCATCCCCAACGCGGTCGAACACCTCGCCAGCTACCTGGCGGCGCTCG CCGCCGGCACCGCCGTCACCGCGCTGGCGCTGGGCCTGCTGAAGAAGAGAATCCCCCAGGCCTGA
Upstream 100 bases:
>100_bases CCTGCCGCCGGAACAACAGATACGAGAGCAGGCCGCCGCCGTCAGCCTGCAAACCCTGGCCGCGGCCTGAGCCGCGTCCG CCCAGAAACAGGGGAAACAC
Downstream 100 bases:
>100_bases TCTCGCCCGCTTGCGCGCGGCATCCTCCCAGGCCCGGCTCAGCCGGGCCTGTCCCTTTCTTTCCCGCGGCCTCGCCAGCT TATTGCGGTCCAGCCATCCC
Product: protein-N p-phosphohistidine-sugar phosphotransferase
Products: NA
Alternate protein names: EIIBC-Fru; EII-Fru; Fructose-specific phosphotransferase enzyme IIB component; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSIVAIIRAPERSTQARLAAEALRQAAQRQGKRIDIEIDGQPALGADILQAASQILLVDCPDDARAGQKPARRATLDAVL ADPAAQLDGAAAAERALSIVAITGCPTGIAHTFMAAEGLVQGAKALGHAMRVETQGSVGAQNALTDAEIAAADLVVIAAD TQVQLDRFAGKRLFKSGTKAAIGDGKALIRRAIAEAQPWSGAAAPAAQAAGKEKTKDGPYRHLMTGVSFMLPFVTAGGIL IALAFALGGIYAFDDAHKGTLAWSLFQIGAKSAFALMVPILAGYIAYSVADRPGIAPGMVGGMLAASLGSGFLGGIVAGF IAGYGTRELNRRIQLGQHLDGLKPVLILPVLGSLLTGLLMIYVVGQPVAAVLAALTDALKGMQGSSALALGALLGAMMAF DMGGPVNKAAYAFATGLIASQVYTPMAAVMAAGMTPPLGIALATRLFRDRFTVDEHEAGKAAAVLGLAFISEGAIPFAAR DPFRVIPALMAGSALAGAVSMTMGVELKVPHGGVFVLPIPNAVEHLASYLAALAAGTAVTALALGLLKKRIPQA
Sequences:
>Translated_554_residues MSIVAIIRAPERSTQARLAAEALRQAAQRQGKRIDIEIDGQPALGADILQAASQILLVDCPDDARAGQKPARRATLDAVL ADPAAQLDGAAAAERALSIVAITGCPTGIAHTFMAAEGLVQGAKALGHAMRVETQGSVGAQNALTDAEIAAADLVVIAAD TQVQLDRFAGKRLFKSGTKAAIGDGKALIRRAIAEAQPWSGAAAPAAQAAGKEKTKDGPYRHLMTGVSFMLPFVTAGGIL IALAFALGGIYAFDDAHKGTLAWSLFQIGAKSAFALMVPILAGYIAYSVADRPGIAPGMVGGMLAASLGSGFLGGIVAGF IAGYGTRELNRRIQLGQHLDGLKPVLILPVLGSLLTGLLMIYVVGQPVAAVLAALTDALKGMQGSSALALGALLGAMMAF DMGGPVNKAAYAFATGLIASQVYTPMAAVMAAGMTPPLGIALATRLFRDRFTVDEHEAGKAAAVLGLAFISEGAIPFAAR DPFRVIPALMAGSALAGAVSMTMGVELKVPHGGVFVLPIPNAVEHLASYLAALAAGTAVTALALGLLKKRIPQA >Mature_553_residues SIVAIIRAPERSTQARLAAEALRQAAQRQGKRIDIEIDGQPALGADILQAASQILLVDCPDDARAGQKPARRATLDAVLA DPAAQLDGAAAAERALSIVAITGCPTGIAHTFMAAEGLVQGAKALGHAMRVETQGSVGAQNALTDAEIAAADLVVIAADT QVQLDRFAGKRLFKSGTKAAIGDGKALIRRAIAEAQPWSGAAAPAAQAAGKEKTKDGPYRHLMTGVSFMLPFVTAGGILI ALAFALGGIYAFDDAHKGTLAWSLFQIGAKSAFALMVPILAGYIAYSVADRPGIAPGMVGGMLAASLGSGFLGGIVAGFI AGYGTRELNRRIQLGQHLDGLKPVLILPVLGSLLTGLLMIYVVGQPVAAVLAALTDALKGMQGSSALALGALLGAMMAFD MGGPVNKAAYAFATGLIASQVYTPMAAVMAAGMTPPLGIALATRLFRDRFTVDEHEAGKAAAVLGLAFISEGAIPFAARD PFRVIPALMAGSALAGAVSMTMGVELKVPHGGVFVLPIPNAVEHLASYLAALAAGTAVTALALGLLKKRIPQA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=453, Percent_Identity=56.0706401766004, Blast_Score=486, Evalue=1e-138, Organism=Escherichia coli, GI1786951, Length=462, Percent_Identity=38.3116883116883, Blast_Score=279, Evalue=3e-76, Organism=Escherichia coli, GI87082348, Length=469, Percent_Identity=36.0341151385927, Blast_Score=248, Evalue=1e-66, Organism=Escherichia coli, GI1790386, Length=300, Percent_Identity=44.6666666666667, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI1788729, Length=410, Percent_Identity=28.0487804878049, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1790387, Length=94, Percent_Identity=42.5531914893617, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788730, Length=95, Percent_Identity=34.7368421052632, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 56383; Mature: 56252
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVAIIRAPERSTQARLAAEALRQAAQRQGKRIDIEIDGQPALGADILQAASQILLVDC CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCEEEEEC PDDARAGQKPARRATLDAVLADPAAQLDGAAAAERALSIVAITGCPTGIAHTFMAAEGLV CCHHCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHCEEEEEEECCCHHHHHHHHHHHHHH QGAKALGHAMRVETQGSVGAQNALTDAEIAAADLVVIAADTQVQLDRFAGKRLFKSGTKA HHHHHHHHHHEEECCCCCCCHHCCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHCCCCC AIGDGKALIRRAIAEAQPWSGAAAPAAQAAGKEKTKDGPYRHLMTGVSFMLPFVTAGGIL CCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IALAFALGGIYAFDDAHKGTLAWSLFQIGAKSAFALMVPILAGYIAYSVADRPGIAPGMV HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GGMLAASLGSGFLGGIVAGFIAGYGTRELNRRIQLGQHLDGLKPVLILPVLGSLLTGLLM HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IYVVGQPVAAVLAALTDALKGMQGSSALALGALLGAMMAFDMGGPVNKAAYAFATGLIAS HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QVYTPMAAVMAAGMTPPLGIALATRLFRDRFTVDEHEAGKAAAVLGLAFISEGAIPFAAR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DPFRVIPALMAGSALAGAVSMTMGVELKVPHGGVFVLPIPNAVEHLASYLAALAAGTAVT CHHHHHHHHHHCHHHHHHHHHHCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH ALALGLLKKRIPQA HHHHHHHHHHCCCC >Mature Secondary Structure SIVAIIRAPERSTQARLAAEALRQAAQRQGKRIDIEIDGQPALGADILQAASQILLVDC CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCEEEEEC PDDARAGQKPARRATLDAVLADPAAQLDGAAAAERALSIVAITGCPTGIAHTFMAAEGLV CCHHCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHCEEEEEEECCCHHHHHHHHHHHHHH QGAKALGHAMRVETQGSVGAQNALTDAEIAAADLVVIAADTQVQLDRFAGKRLFKSGTKA HHHHHHHHHHEEECCCCCCCHHCCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHCCCCC AIGDGKALIRRAIAEAQPWSGAAAPAAQAAGKEKTKDGPYRHLMTGVSFMLPFVTAGGIL CCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IALAFALGGIYAFDDAHKGTLAWSLFQIGAKSAFALMVPILAGYIAYSVADRPGIAPGMV HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GGMLAASLGSGFLGGIVAGFIAGYGTRELNRRIQLGQHLDGLKPVLILPVLGSLLTGLLM HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IYVVGQPVAAVLAALTDALKGMQGSSALALGALLGAMMAFDMGGPVNKAAYAFATGLIAS HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QVYTPMAAVMAAGMTPPLGIALATRLFRDRFTVDEHEAGKAAAVLGLAFISEGAIPFAAR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DPFRVIPALMAGSALAGAVSMTMGVELKVPHGGVFVLPIPNAVEHLASYLAALAAGTAVT CHHHHHHHHHHCHHHHHHHHHHCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH ALALGLLKKRIPQA HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1655739; 12024217; 1650911 [H]