| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cheV3 [H]
Identifier: 34498487
GI number: 34498487
Start: 3312165
End: 3313109
Strand: Reverse
Name: cheV3 [H]
Synonym: CV_3032
Alternate gene names: 34498487
Gene position: 3313109-3312165 (Counterclockwise)
Preceding gene: 34498488
Following gene: 34498486
Centisome position: 69.73
GC content: 60.95
Gene sequence:
>945_bases ATGTCGGACCTGCTGAAAAAAATCGACGCCCGAACCAAGCTGGCCGGCACCAACAAGCTGGAAATCCTGCTGTTTTCGCT GGGCGATGATCAGCGCACCGGCCGCAAGGAGGTGTTCGGCATCAATGTGTTCAAGGTGCGCGAGGTGATGCGCACGCCGG AAATCACCACCGCGCCGGAGATGCCGGCCTCGGTGGAAGGCATGGTTAGCCTGCGCGGCGCGCTGGTGCCGGTGATCGAT CTGGGCAAATACACCGGCATCGTCACCCCCAAGCGGCCGGAAATCATGATCATCACCGAATACAACGGCCATACCCAGGG CTTTCTGGTGGAGACGGTGGACACCATATTGCGTTTGGATTGGGCGGCGATGCGGGTGCCGCCGGACATGATCACCAACC GGATGGCGGGCCTGGTCACCGCGGTCACTGAGCTGGAGAACGGCACGCTGGTGATGATGATGGACGTGGAGAAGGTGCTG GCCGAAACCTGCCTGTCCGACGAGACGCAGAATTACATCTCCATCGAGCCGGTGAAGGAAGACCGGCACATCTTTTTCGC CGACGACAGCGCGGTGGCGCGCAAGCAGATCGAGCGCACGCTGGAGGCGATGCATATCCGCTATTCGTCGGAAATGAACG GCATGCGCGGCTGGGAAACGCTGCAGAAGATGGCGCAGCAGGCGGAGGCGGCCGGCCACAAGTTGAGCGATGTGCTGCAC CTGATCCTCACCGATGTGGAAATGCCGGAAATGGACGGCTATATGCTGACCAAGATGATCAAGGACGACGCGCGTTTCGC CGGCATCCCGGTGCTGATGCACTCTTCGCTGTCCGGCATGGCCAACAAGAAGCTGGGCGAGTCGGTGGGCGTGGATGCTT ACGTGTCCAAGGACGAGCCGCAGAAGCTGGCCAGCAAGCTGAGGGAGATGCTGTTGCTGGCGTAA
Upstream 100 bases:
>100_bases GCTGCCTCTCGACGAAAAGTCTTATGTCATATTTCGACAAGCCCATCTAGTTTGAGATATTTGCTATAAAGACATACTGT CTTTTGCAAGGAGTTGTGCG
Downstream 100 bases:
>100_bases GTTGTATTGGACGGATCTCGCAGGCGCGCCATGGTGCGTCATCTTTGCCGGCGCAGACTGGCGTGATTTTCGTTGCCCTG GAGAGTTGAAATGGCTGCAG
Product: chemotaxis protein CheV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSDLLKKIDARTKLAGTNKLEILLFSLGDDQRTGRKEVFGINVFKVREVMRTPEITTAPEMPASVEGMVSLRGALVPVID LGKYTGIVTPKRPEIMIITEYNGHTQGFLVETVDTILRLDWAAMRVPPDMITNRMAGLVTAVTELENGTLVMMMDVEKVL AETCLSDETQNYISIEPVKEDRHIFFADDSAVARKQIERTLEAMHIRYSSEMNGMRGWETLQKMAQQAEAAGHKLSDVLH LILTDVEMPEMDGYMLTKMIKDDARFAGIPVLMHSSLSGMANKKLGESVGVDAYVSKDEPQKLASKLREMLLLA
Sequences:
>Translated_314_residues MSDLLKKIDARTKLAGTNKLEILLFSLGDDQRTGRKEVFGINVFKVREVMRTPEITTAPEMPASVEGMVSLRGALVPVID LGKYTGIVTPKRPEIMIITEYNGHTQGFLVETVDTILRLDWAAMRVPPDMITNRMAGLVTAVTELENGTLVMMMDVEKVL AETCLSDETQNYISIEPVKEDRHIFFADDSAVARKQIERTLEAMHIRYSSEMNGMRGWETLQKMAQQAEAAGHKLSDVLH LILTDVEMPEMDGYMLTKMIKDDARFAGIPVLMHSSLSGMANKKLGESVGVDAYVSKDEPQKLASKLREMLLLA >Mature_313_residues SDLLKKIDARTKLAGTNKLEILLFSLGDDQRTGRKEVFGINVFKVREVMRTPEITTAPEMPASVEGMVSLRGALVPVIDL GKYTGIVTPKRPEIMIITEYNGHTQGFLVETVDTILRLDWAAMRVPPDMITNRMAGLVTAVTELENGTLVMMMDVEKVLA ETCLSDETQNYISIEPVKEDRHIFFADDSAVARKQIERTLEAMHIRYSSEMNGMRGWETLQKMAQQAEAAGHKLSDVLHL ILTDVEMPEMDGYMLTKMIKDDARFAGIPVLMHSSLSGMANKKLGESVGVDAYVSKDEPQKLASKLREMLLLA
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 35020; Mature: 34889
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLKKIDARTKLAGTNKLEILLFSLGDDQRTGRKEVFGINVFKVREVMRTPEITTAPE CHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHEEECHHHHHHHHHHCCCCCCCCC MPASVEGMVSLRGALVPVIDLGKYTGIVTPKRPEIMIITEYNGHTQGFLVETVDTILRLD CCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH WAAMRVPPDMITNRMAGLVTAVTELENGTLVMMMDVEKVLAETCLSDETQNYISIEPVKE HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEECC DRHIFFADDSAVARKQIERTLEAMHIRYSSEMNGMRGWETLQKMAQQAEAAGHKLSDVLH CCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH LILTDVEMPEMDGYMLTKMIKDDARFAGIPVLMHSSLSGMANKKLGESVGVDAYVSKDEP HHHHCCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCHHCCCCEEECCCCH QKLASKLREMLLLA HHHHHHHHHHHHCC >Mature Secondary Structure SDLLKKIDARTKLAGTNKLEILLFSLGDDQRTGRKEVFGINVFKVREVMRTPEITTAPE HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHEEECHHHHHHHHHHCCCCCCCCC MPASVEGMVSLRGALVPVIDLGKYTGIVTPKRPEIMIITEYNGHTQGFLVETVDTILRLD CCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH WAAMRVPPDMITNRMAGLVTAVTELENGTLVMMMDVEKVLAETCLSDETQNYISIEPVKE HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEECC DRHIFFADDSAVARKQIERTLEAMHIRYSSEMNGMRGWETLQKMAQQAEAAGHKLSDVLH CCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH LILTDVEMPEMDGYMLTKMIKDDARFAGIPVLMHSSLSGMANKKLGESVGVDAYVSKDEP HHHHCCCCCCCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCHHCCCCEEECCCCH QKLASKLREMLLLA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]