| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mgtC [H]
Identifier: 34498476
GI number: 34498476
Start: 3298283
End: 3299032
Strand: Direct
Name: mgtC [H]
Synonym: CV_3021
Alternate gene names: 34498476
Gene position: 3298283-3299032 (Clockwise)
Preceding gene: 34498469
Following gene: 34498490
Centisome position: 69.42
GC content: 66.93
Gene sequence:
>750_bases ATGGATCAGAGCTGGCAGCAATTGGCGGCCCTTTACTGGAGCGCGGGCAAATGGCAGATCAACCTGCTGGTGATCGCCCA CCTGGCCGGCGGGCTGCTGCTGGGCAGCCTGCTCGGCTACGAGCGCTGGTACAACGGCCGCGCGGCCGGCATGCGCACCT ACGGCCTGGTGTGCATGGCCTCGTCGGCGGCGATCAGCATCATCGGCTATTCCGGCTACTGGTACGGCGGCCAATCGGCC GACATCATGCACGGCGACATGACCCGCGTGGCCCAAGGCGTGCTGACCGGCATCGGTTTCCTGGGCGCCGGCATGATCAT GAAGGAAGGCTTGAGCATCAGCGGCCTGACGTCGGCCGCCTCGGTGTGGATGTCGTCGGTGATCGGCATCCTGATCGGCG TCGGCTTCTACGCCGCGGCCATCGCGCTGACCGTGCTGTGCATGGTCTTCGTCACCGTGGTGAACCGCATCGAGAACATC CTGCCGCGGCGGGTCAGCCTGTTCGTCAGCGTCAAGCTGAGCCCGGAACACGACTGGACGGTGGAGCGGTTGGCGGAACG GCTGGCGCCGTCCGGGCTGAAGCTGCACGAGGAAAGCATCAGCGTGCGCGCCGACCCGTCCGGCGCCAGCTGGAGCTTCC TGGTGTCCGCCCAGGACCGCCGCAGCTACATCAGCGTGGTGGACCTGGCCCGCGACATCATGATCGCCGACCACATCCTG GAGCTGGACCTGCAGCCGGCGCGCAACTGA
Upstream 100 bases:
>100_bases TAAGAGCGACAGCGCGCTTGGGAAAACGCCGGCCGTTATGCCATGATGCCGGCTTGAACGAACAGACATCGAACGCGCCC GATGGCGGCGGAGGAAGGCA
Downstream 100 bases:
>100_bases GCGCGCGCGGGCCCCTTACAGCGCCACGCCCGGCGGCGGCTGGTCGTGGCTTTGCGTCATCGACTGGTGCGGCAGCTCCA GATAACTCTTGGACTGCATC
Product: Mg(2+) transport ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDQSWQQLAALYWSAGKWQINLLVIAHLAGGLLLGSLLGYERWYNGRAAGMRTYGLVCMASSAAISIIGYSGYWYGGQSA DIMHGDMTRVAQGVLTGIGFLGAGMIMKEGLSISGLTSAASVWMSSVIGILIGVGFYAAAIALTVLCMVFVTVVNRIENI LPRRVSLFVSVKLSPEHDWTVERLAERLAPSGLKLHEESISVRADPSGASWSFLVSAQDRRSYISVVDLARDIMIADHIL ELDLQPARN
Sequences:
>Translated_249_residues MDQSWQQLAALYWSAGKWQINLLVIAHLAGGLLLGSLLGYERWYNGRAAGMRTYGLVCMASSAAISIIGYSGYWYGGQSA DIMHGDMTRVAQGVLTGIGFLGAGMIMKEGLSISGLTSAASVWMSSVIGILIGVGFYAAAIALTVLCMVFVTVVNRIENI LPRRVSLFVSVKLSPEHDWTVERLAERLAPSGLKLHEESISVRADPSGASWSFLVSAQDRRSYISVVDLARDIMIADHIL ELDLQPARN >Mature_249_residues MDQSWQQLAALYWSAGKWQINLLVIAHLAGGLLLGSLLGYERWYNGRAAGMRTYGLVCMASSAAISIIGYSGYWYGGQSA DIMHGDMTRVAQGVLTGIGFLGAGMIMKEGLSISGLTSAASVWMSSVIGILIGVGFYAAAIALTVLCMVFVTVVNRIENI LPRRVSLFVSVKLSPEHDWTVERLAERLAPSGLKLHEESISVRADPSGASWSFLVSAQDRRSYISVVDLARDIMIADHIL ELDLQPARN
Specific function: Virulence factor required for growth in low Mg(2+) medium and for intramacrophage survival. May be involved in regulating membrane potential by activating Na(+)/K(+)-ATPase [H]
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=120, Percent_Identity=35, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 26968; Mature: 26968
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQSWQQLAALYWSAGKWQINLLVIAHLAGGLLLGSLLGYERWYNGRAAGMRTYGLVCMA CCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEE SSAAISIIGYSGYWYGGQSADIMHGDMTRVAQGVLTGIGFLGAGMIMKEGLSISGLTSAA CCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SVWMSSVIGILIGVGFYAAAIALTVLCMVFVTVVNRIENILPRRVSLFVSVKLSPEHDWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCCH VERLAERLAPSGLKLHEESISVRADPSGASWSFLVSAQDRRSYISVVDLARDIMIADHIL HHHHHHHHCCCCCEEECCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH ELDLQPARN HCCCCCCCC >Mature Secondary Structure MDQSWQQLAALYWSAGKWQINLLVIAHLAGGLLLGSLLGYERWYNGRAAGMRTYGLVCMA CCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEE SSAAISIIGYSGYWYGGQSADIMHGDMTRVAQGVLTGIGFLGAGMIMKEGLSISGLTSAA CCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH SVWMSSVIGILIGVGFYAAAIALTVLCMVFVTVVNRIENILPRRVSLFVSVKLSPEHDWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCCH VERLAERLAPSGLKLHEESISVRADPSGASWSFLVSAQDRRSYISVVDLARDIMIADHIL HHHHHHHHCCCCCEEECCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH ELDLQPARN HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA