| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498363
Identifier: 34498363
GI number: 34498363
Start: 3186574
End: 3187032
Strand: Reverse
Name: 34498363
Synonym: CV_2908
Alternate gene names: NA
Gene position: 3187032-3186574 (Counterclockwise)
Preceding gene: 34498364
Following gene: 34498362
Centisome position: 67.08
GC content: 61.22
Gene sequence:
>459_bases ATGCTTTTTCTTGTGCTTGTGATGCGGCTTGGCGGTTGTCTTCTTATTTTTATGGGCCTTGTGCTTGTGGGCCTTGGCCG GTTTGTGGGCTTTCTTCTTGGCGTGATGCTTGGCCTGGCCTTTTTTCAGATGCTTGCCGCCGGCCTGCGCGCGCTTGTTT TTGGAAGCATGCTTGGATTTCGCGTGATGCGGTTTGGCGGCATGTTTTTTGGCGTGGGCCTTGCCGGATTTGGCGTGCGG GGCCTTGGCTTTGCCCTCCGCATGGGCGGCAGGCTTGGAAGCGTGGCTGGGCGCGGCTTTGGCGCGGGGCTGGTGCAGCG GCTTGGCGGCCGGCGCGGGCTGGAAGTCGCCGGGCAGCGGCTGGTCTTCCGGCTCTGCGTGGCTCAGGGGGCTGGCGATG GCCAGGCCGATGGCGATGAACGGGCTTATCAGCTTGATCAGGTTCATTGTTTTATCTGA
Upstream 100 bases:
>100_bases CGCGACCCCCTGATTACAAGTCAGGTGCTCTACCAACTGAGCTACACCGGCGAAGAGAGACGCATTATGCCCGGCTGTTT ATTGCTTGGCAAGAGGCCTA
Downstream 100 bases:
>100_bases TTCGTTGGAGGGGAACCGCTGATCGGAATCGTGGCGGTATTTGCCTATATTAGCATGAGTGCGGGGCGCGGCCAGGAACC GGCCGCGATCAAAACCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MLFLVLVMRLGGCLLIFMGLVLVGLGRFVGFLLGVMLGLAFFQMLAAGLRALVFGSMLGFRVMRFGGMFFGVGLAGFGVR GLGFALRMGGRLGSVAGRGFGAGLVQRLGGRRGLEVAGQRLVFRLCVAQGAGDGQADGDERAYQLDQVHCFI
Sequences:
>Translated_152_residues MLFLVLVMRLGGCLLIFMGLVLVGLGRFVGFLLGVMLGLAFFQMLAAGLRALVFGSMLGFRVMRFGGMFFGVGLAGFGVR GLGFALRMGGRLGSVAGRGFGAGLVQRLGGRRGLEVAGQRLVFRLCVAQGAGDGQADGDERAYQLDQVHCFI >Mature_152_residues MLFLVLVMRLGGCLLIFMGLVLVGLGRFVGFLLGVMLGLAFFQMLAAGLRALVFGSMLGFRVMRFGGMFFGVGLAGFGVR GLGFALRMGGRLGSVAGRGFGAGLVQRLGGRRGLEVAGQRLVFRLCVAQGAGDGQADGDERAYQLDQVHCFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16028; Mature: 16028
Theoretical pI: Translated: 12.06; Mature: 12.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLVLVMRLGGCLLIFMGLVLVGLGRFVGFLLGVMLGLAFFQMLAAGLRALVFGSMLGF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVMRFGGMFFGVGLAGFGVRGLGFALRMGGRLGSVAGRGFGAGLVQRLGGRRGLEVAGQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHH LVFRLCVAQGAGDGQADGDERAYQLDQVHCFI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLFLVLVMRLGGCLLIFMGLVLVGLGRFVGFLLGVMLGLAFFQMLAAGLRALVFGSMLGF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVMRFGGMFFGVGLAGFGVRGLGFALRMGGRLGSVAGRGFGAGLVQRLGGRRGLEVAGQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHH LVFRLCVAQGAGDGQADGDERAYQLDQVHCFI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA