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The map label for this gene is mcp4 [H]

Identifier: 34498362

GI number: 34498362

Start: 3184833

End: 3186440

Strand: Reverse

Name: mcp4 [H]

Synonym: CV_2907

Alternate gene names: 34498362

Gene position: 3186440-3184833 (Counterclockwise)

Preceding gene: 34498363

Following gene: 34498357

Centisome position: 67.07

GC content: 66.73

Gene sequence:

>1608_bases
ATGAAGCTTTCCACCCGCCTGGGCATTCTGGTATTGAACGCGGGCCTGGGCCTGGTCGTATTGGCGGGCGTCGCCTTGTA
CAGCCTGCATGATTCGCAGTTGGAGGACCGCCGCTCGCAGATCCGCATCCTGCTGACGCTTGCTGGACAGCAGGTTTCGC
ATTTCCAGAAGCTGGAGCAGTCCGGCAAGCTGTCCCGGCCGGAGGCGCAACGGCGCGCGATAGAGGCGATGAGCAGCCTG
CGCGACAAGGGCAGCTACGTTTTCGCCCGGGGCAGCGACAACCTGGTGCTGGTTCACCCGGACAAACGCAAGCTGGGCAA
GAACGACCCCGGCGAAAAACTGCCGGACGGACGCACGCTGGTGCAGGCTTACGACGACGTGCTGCGCGACGCCGATTTCG
GCTTTGTGCAAATCCGCACCCGCCGCCCCAATGGCGACGTGCCGCTGCCCAAGCTCAACGCGGTGATGCGCATCCATGGC
TGGAACTGGACCATAGGCACCGGCGTGTTCCTGGATGATGTCGACCAGGTGTTCAACAGGCTGGCGCTGCGGCTGCTGCT
GATCGGCGCGGCGGTGCTGGCGGTGGTGATCGCCATGACCTGGCTGGTGGCCCGTTCGATCTACGCGGTGATAGGCGGGG
AGCCATACGACGCATCGCGCACGGCGCTGGACATCGCGGCCGGCGATTTGACCCTGAGCGTGAAGAGCGAAGGCCGCGGC
AGCCTGATGGAGGCGATCGCGACGATGCAGGAGAGCCTGCGCGGCATGATACAAAGCCTGCAGCGCGGCGCGACGGACCT
GGAGCGCGCGGTGGGCGGCCTGAGCGGCCAGGTGGAGCGCATCAACGACGCGGCGCACCAATCGCTGCTGGCGACCCAGG
GCACGTCCCGCGAGATCGAATCCATGGCGGCCTGCAGCGACCAGGTGAGCGTTTGCGCGGGGGAGACGGAGAGCGATTCC
CTGCGCTCCTGCCGCCTGGCGGGACAGGGAGAAAAACTGGTGATGCAGGCGGCGGACGAGATCCAGCTGGTATCCGGACA
GATCGCCAGCGCCTCGACCCTGATAGGCGGCCTGGCCGACCGTTCCCGGGAAATAGACGGCATCGCCGGCGAGATCAAGG
AAATCGCCGACCAGACCAATCTGCTGGCCCTGAACGCGGCGATTGAGGCGGCCCGGGCCGGCGAAAGCGGCCGCGGCTTC
GCCGTGGTGGCGGACGAGGTGCGCAAGCTGGCGGAACGCAGCGCCCAGGCTACGGAAAGAATCGCCGGCATGGTCAAGCG
CATCCAGGAGGACACCGGCTCCGTGGCGGACAGCATGAGCGAGGTGAGGCCGCTGGTGACGCGCGGGGTGGAAAGGGCGC
AGGAAGCGGCGCAGGCGCTGCGCGAGATCAATCAAGGCGCCGAGCACACGCTGGAGCAGATACGCTCGATGGCGAAGGTG
GCGACGGAACAGGCCGAGGCCGGGCATAGCGTCGCGTCCAACGTGGCGTCCATCACGCGGATGGTGGACGCGTCGCAGGC
CTCAGTCACCGAAGTGAGCGGCAACGTCGAGGCCTTGTCGGCGCTGGCCCATCAGCTCAAGGATTCGGTGGCCAAGTTCC
GCTTGTAG

Upstream 100 bases:

>100_bases
GCGGTATTTGCCTATATTAGCATGAGTGCGGGGCGCGGCCAGGAACCGGCCGCGATCAAAACCGCTTGATCAAGGATGTA
CTGGATCAGGAGTGATGGCC

Downstream 100 bases:

>100_bases
CCGCAAGCCGCCTTGTTCATGAGCGTGGGAGCCTTGGGTTTCCTGGCGGTCATTGCATGGGTCATGGGGGAGCGCTGTTG
CATAAATCCTGGACAAGACG

Product: methyl-accepting chemotaxis transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKLSTRLGILVLNAGLGLVVLAGVALYSLHDSQLEDRRSQIRILLTLAGQQVSHFQKLEQSGKLSRPEAQRRAIEAMSSL
RDKGSYVFARGSDNLVLVHPDKRKLGKNDPGEKLPDGRTLVQAYDDVLRDADFGFVQIRTRRPNGDVPLPKLNAVMRIHG
WNWTIGTGVFLDDVDQVFNRLALRLLLIGAAVLAVVIAMTWLVARSIYAVIGGEPYDASRTALDIAAGDLTLSVKSEGRG
SLMEAIATMQESLRGMIQSLQRGATDLERAVGGLSGQVERINDAAHQSLLATQGTSREIESMAACSDQVSVCAGETESDS
LRSCRLAGQGEKLVMQAADEIQLVSGQIASASTLIGGLADRSREIDGIAGEIKEIADQTNLLALNAAIEAARAGESGRGF
AVVADEVRKLAERSAQATERIAGMVKRIQEDTGSVADSMSEVRPLVTRGVERAQEAAQALREINQGAEHTLEQIRSMAKV
ATEQAEAGHSVASNVASITRMVDASQASVTEVSGNVEALSALAHQLKDSVAKFRL

Sequences:

>Translated_535_residues
MKLSTRLGILVLNAGLGLVVLAGVALYSLHDSQLEDRRSQIRILLTLAGQQVSHFQKLEQSGKLSRPEAQRRAIEAMSSL
RDKGSYVFARGSDNLVLVHPDKRKLGKNDPGEKLPDGRTLVQAYDDVLRDADFGFVQIRTRRPNGDVPLPKLNAVMRIHG
WNWTIGTGVFLDDVDQVFNRLALRLLLIGAAVLAVVIAMTWLVARSIYAVIGGEPYDASRTALDIAAGDLTLSVKSEGRG
SLMEAIATMQESLRGMIQSLQRGATDLERAVGGLSGQVERINDAAHQSLLATQGTSREIESMAACSDQVSVCAGETESDS
LRSCRLAGQGEKLVMQAADEIQLVSGQIASASTLIGGLADRSREIDGIAGEIKEIADQTNLLALNAAIEAARAGESGRGF
AVVADEVRKLAERSAQATERIAGMVKRIQEDTGSVADSMSEVRPLVTRGVERAQEAAQALREINQGAEHTLEQIRSMAKV
ATEQAEAGHSVASNVASITRMVDASQASVTEVSGNVEALSALAHQLKDSVAKFRL
>Mature_535_residues
MKLSTRLGILVLNAGLGLVVLAGVALYSLHDSQLEDRRSQIRILLTLAGQQVSHFQKLEQSGKLSRPEAQRRAIEAMSSL
RDKGSYVFARGSDNLVLVHPDKRKLGKNDPGEKLPDGRTLVQAYDDVLRDADFGFVQIRTRRPNGDVPLPKLNAVMRIHG
WNWTIGTGVFLDDVDQVFNRLALRLLLIGAAVLAVVIAMTWLVARSIYAVIGGEPYDASRTALDIAAGDLTLSVKSEGRG
SLMEAIATMQESLRGMIQSLQRGATDLERAVGGLSGQVERINDAAHQSLLATQGTSREIESMAACSDQVSVCAGETESDS
LRSCRLAGQGEKLVMQAADEIQLVSGQIASASTLIGGLADRSREIDGIAGEIKEIADQTNLLALNAAIEAARAGESGRGF
AVVADEVRKLAERSAQATERIAGMVKRIQEDTGSVADSMSEVRPLVTRGVERAQEAAQALREINQGAEHTLEQIRSMAKV
ATEQAEAGHSVASNVASITRMVDASQASVTEVSGNVEALSALAHQLKDSVAKFRL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=356, Percent_Identity=31.4606741573034, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1788194, Length=316, Percent_Identity=31.6455696202532, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788195, Length=274, Percent_Identity=32.1167883211679, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1789453, Length=437, Percent_Identity=27.0022883295195, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI2367378, Length=293, Percent_Identity=31.0580204778157, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57230; Mature: 57230

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTRLGILVLNAGLGLVVLAGVALYSLHDSQLEDRRSQIRILLTLAGQQVSHFQKLEQ
CCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCHHHHHHHHHHH
SGKLSRPEAQRRAIEAMSSLRDKGSYVFARGSDNLVLVHPDKRKLGKNDPGEKLPDGRTL
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHCCCCCCCCCCCCCHHH
VQAYDDVLRDADFGFVQIRTRRPNGDVPLPKLNAVMRIHGWNWTIGTGVFLDDVDQVFNR
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHH
LALRLLLIGAAVLAVVIAMTWLVARSIYAVIGGEPYDASRTALDIAAGDLTLSVKSEGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCH
SLMEAIATMQESLRGMIQSLQRGATDLERAVGGLSGQVERINDAAHQSLLATQGTSREIE
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
SMAACSDQVSVCAGETESDSLRSCRLAGQGEKLVMQAADEIQLVSGQIASASTLIGGLAD
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RSREIDGIAGEIKEIADQTNLLALNAAIEAARAGESGRGFAVVADEVRKLAERSAQATER
HCCCCCHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH
IAGMVKRIQEDTGSVADSMSEVRPLVTRGVERAQEAAQALREINQGAEHTLEQIRSMAKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATEQAEAGHSVASNVASITRMVDASQASVTEVSGNVEALSALAHQLKDSVAKFRL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSTRLGILVLNAGLGLVVLAGVALYSLHDSQLEDRRSQIRILLTLAGQQVSHFQKLEQ
CCCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCHHHHHHHHHHH
SGKLSRPEAQRRAIEAMSSLRDKGSYVFARGSDNLVLVHPDKRKLGKNDPGEKLPDGRTL
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHCCCCCCCCCCCCCHHH
VQAYDDVLRDADFGFVQIRTRRPNGDVPLPKLNAVMRIHGWNWTIGTGVFLDDVDQVFNR
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHH
LALRLLLIGAAVLAVVIAMTWLVARSIYAVIGGEPYDASRTALDIAAGDLTLSVKSEGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCH
SLMEAIATMQESLRGMIQSLQRGATDLERAVGGLSGQVERINDAAHQSLLATQGTSREIE
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
SMAACSDQVSVCAGETESDSLRSCRLAGQGEKLVMQAADEIQLVSGQIASASTLIGGLAD
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RSREIDGIAGEIKEIADQTNLLALNAAIEAARAGESGRGFAVVADEVRKLAERSAQATER
HCCCCCHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH
IAGMVKRIQEDTGSVADSMSEVRPLVTRGVERAQEAAQALREINQGAEHTLEQIRSMAKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATEQAEAGHSVASNVASITRMVDASQASVTEVSGNVEALSALAHQLKDSVAKFRL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]