| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498287
Identifier: 34498287
GI number: 34498287
Start: 3085799
End: 3087010
Strand: Direct
Name: 34498287
Synonym: CV_2832
Alternate gene names: NA
Gene position: 3085799-3087010 (Clockwise)
Preceding gene: 34498286
Following gene: 34498288
Centisome position: 64.95
GC content: 63.61
Gene sequence:
>1212_bases ATGCTGCGCATCAAACAGAGCATCATCAATCAGCTGCTGCAGGGCTGTGGCCTGGATGAGCTGAAAAAGGCCGTGAACAC CGCGATAGCGCTCGAGTTTTCCACCATCCCGCCCTATCTGACCGGCCTGTTTTCCATCATGCCCGGCAGCAACCAGAGGG CCTCGGCCCTGATTCAATCGGTGGTGACCGAGGAAATGCTGCACCTGACGCTGGCGTCCAACATCCTGATCGCCATCGGC GGCAATCCGGACATCGTCGCCATCGGCCGCTCCCTGGTCTATCCGGGGCCGCTGCCGGACAAGATAGACAATGACCTGCA GGTGGGACTGGCCGCGCTGAGCAAACCTCAACTGCAAAACGTGTTCATGGCGATAGAGCGGCCGGAAACCAAGCCGGGGG AAATCCTGCCGGGCGAAGAAGTGCCGCAGCCTACGCCGGTCAACCCCGGCGAATTCGGCTCCATCGGCCAGTTCTACCAG GCGCTGCTGATCGGCCTGACCCTGGCCAACGCCAGCAATCCGGAACTGTTCTCCAATCCCAGGCTGGACCAGCAGCTGGA CATCAGCAAATGGTTCCCGCCGGTGCCGACCGCGCCGGCCCAGGGCAAGATCCGCAACCTCGACGACGCGGCGCTGGCGA TCAACACCATCGTGATCCAGGGTGAAGGCATACAGACCGATGACCAGGACCGCGGCAATCTGGAAGGCCAACGCCTGGAG AGCAAGCCCAGACCCGCCCTGCTGAACGCGCGCATCCTGCCGCGGCATCAGGGCGCCGCAGAGCGCGGCGCGTCGGCTCA GAATGTCTTTCCAGGGGACGGCGACGGCAGCTACGCGCACTATTTCAAGTTCGGCGAGATCTTCCACGGCCGCGAGCTGA TGCCGGACCTCGAAGCTGTTTCAGGCTGGTCCTACAACGGCGCGCCGGTGCCGCTGGACGAGAGCCGGATCTACAACTTC CTGCCCAACGCCGCCGTCAGCGACTACCTGCCCGGCTCATCGGCGGCAGTGGCCGCCCAACGCTTCTACGACACTTACCA GATGCTGCTGACCAGCCTGGACCAAGTGTTCAACGGCAAGCCGGCGGCCATGGACCAAGCGATGGGCCTGATGTATCAGC TGAAGCTGCAGGCGCAGCAGGTGGCGCAATGCCCGGTCGGCGGCAACGCGTCCAATCTGATGGCGGCGCCGCCGTTCATG CTGATCCGTTGA
Upstream 100 bases:
>100_bases CGCGCGCGGACTGCCCGGAAGGCGCTGTCGGCTATGGCAAGGGCGGCAAGCCCGATTGCCCGGCCAAGTAACCGAGCCTC CATTCTGAAAGGGTACGAAT
Downstream 100 bases:
>100_bases TCCGCCCATGGCCACGCGTTCCGGCAAGCTTGCCGAAGCGCGTGGCTTACGCACCAGGAGATGCCGATGACCGGAACGGA TGCTCTTCGCCCTCTCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MLRIKQSIINQLLQGCGLDELKKAVNTAIALEFSTIPPYLTGLFSIMPGSNQRASALIQSVVTEEMLHLTLASNILIAIG GNPDIVAIGRSLVYPGPLPDKIDNDLQVGLAALSKPQLQNVFMAIERPETKPGEILPGEEVPQPTPVNPGEFGSIGQFYQ ALLIGLTLANASNPELFSNPRLDQQLDISKWFPPVPTAPAQGKIRNLDDAALAINTIVIQGEGIQTDDQDRGNLEGQRLE SKPRPALLNARILPRHQGAAERGASAQNVFPGDGDGSYAHYFKFGEIFHGRELMPDLEAVSGWSYNGAPVPLDESRIYNF LPNAAVSDYLPGSSAAVAAQRFYDTYQMLLTSLDQVFNGKPAAMDQAMGLMYQLKLQAQQVAQCPVGGNASNLMAAPPFM LIR
Sequences:
>Translated_403_residues MLRIKQSIINQLLQGCGLDELKKAVNTAIALEFSTIPPYLTGLFSIMPGSNQRASALIQSVVTEEMLHLTLASNILIAIG GNPDIVAIGRSLVYPGPLPDKIDNDLQVGLAALSKPQLQNVFMAIERPETKPGEILPGEEVPQPTPVNPGEFGSIGQFYQ ALLIGLTLANASNPELFSNPRLDQQLDISKWFPPVPTAPAQGKIRNLDDAALAINTIVIQGEGIQTDDQDRGNLEGQRLE SKPRPALLNARILPRHQGAAERGASAQNVFPGDGDGSYAHYFKFGEIFHGRELMPDLEAVSGWSYNGAPVPLDESRIYNF LPNAAVSDYLPGSSAAVAAQRFYDTYQMLLTSLDQVFNGKPAAMDQAMGLMYQLKLQAQQVAQCPVGGNASNLMAAPPFM LIR >Mature_403_residues MLRIKQSIINQLLQGCGLDELKKAVNTAIALEFSTIPPYLTGLFSIMPGSNQRASALIQSVVTEEMLHLTLASNILIAIG GNPDIVAIGRSLVYPGPLPDKIDNDLQVGLAALSKPQLQNVFMAIERPETKPGEILPGEEVPQPTPVNPGEFGSIGQFYQ ALLIGLTLANASNPELFSNPRLDQQLDISKWFPPVPTAPAQGKIRNLDDAALAINTIVIQGEGIQTDDQDRGNLEGQRLE SKPRPALLNARILPRHQGAAERGASAQNVFPGDGDGSYAHYFKFGEIFHGRELMPDLEAVSGWSYNGAPVPLDESRIYNF LPNAAVSDYLPGSSAAVAAQRFYDTYQMLLTSLDQVFNGKPAAMDQAMGLMYQLKLQAQQVAQCPVGGNASNLMAAPPFM LIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43498; Mature: 43498
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIKQSIINQLLQGCGLDELKKAVNTAIALEFSTIPPYLTGLFSIMPGSNQRASALIQS CCCHHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHH VVTEEMLHLTLASNILIAIGGNPDIVAIGRSLVYPGPLPDKIDNDLQVGLAALSKPQLQN HHHHHHHHHHHHCCEEEEECCCCCEEEECCCEECCCCCCCCCCCHHHHHHHHHCCHHHHH VFMAIERPETKPGEILPGEEVPQPTPVNPGEFGSIGQFYQALLIGLTLANASNPELFSNP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC RLDQQLDISKWFPPVPTAPAQGKIRNLDDAALAINTIVIQGEGIQTDDQDRGNLEGQRLE CCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHC SKPRPALLNARILPRHQGAAERGASAQNVFPGDGDGSYAHYFKFGEIFHGRELMPDLEAV CCCCCCEECCEECCCCCCHHHHCCCCCCCCCCCCCCCEEHHEEHHHHHCCCHHCCCHHHH SGWSYNGAPVPLDESRIYNFLPNAAVSDYLPGSSAAVAAQRFYDTYQMLLTSLDQVFNGK CCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PAAMDQAMGLMYQLKLQAQQVAQCPVGGNASNLMAAPPFMLIR CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MLRIKQSIINQLLQGCGLDELKKAVNTAIALEFSTIPPYLTGLFSIMPGSNQRASALIQS CCCHHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHH VVTEEMLHLTLASNILIAIGGNPDIVAIGRSLVYPGPLPDKIDNDLQVGLAALSKPQLQN HHHHHHHHHHHHCCEEEEECCCCCEEEECCCEECCCCCCCCCCCHHHHHHHHHCCHHHHH VFMAIERPETKPGEILPGEEVPQPTPVNPGEFGSIGQFYQALLIGLTLANASNPELFSNP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC RLDQQLDISKWFPPVPTAPAQGKIRNLDDAALAINTIVIQGEGIQTDDQDRGNLEGQRLE CCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHC SKPRPALLNARILPRHQGAAERGASAQNVFPGDGDGSYAHYFKFGEIFHGRELMPDLEAV CCCCCCEECCEECCCCCCHHHHCCCCCCCCCCCCCCCEEHHEEHHHHHCCCHHCCCHHHH SGWSYNGAPVPLDESRIYNFLPNAAVSDYLPGSSAAVAAQRFYDTYQMLLTSLDQVFNGK CCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PAAMDQAMGLMYQLKLQAQQVAQCPVGGNASNLMAAPPFMLIR CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA