Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498286

Identifier: 34498286

GI number: 34498286

Start: 3083574

End: 3085769

Strand: Direct

Name: 34498286

Synonym: CV_2831

Alternate gene names: NA

Gene position: 3083574-3085769 (Clockwise)

Preceding gene: 34498282

Following gene: 34498287

Centisome position: 64.9

GC content: 63.71

Gene sequence:

>2196_bases
ATGAGTTATCTCCAGTACCCCCGCCTGGCCTTTTCAGGCCTGTTCCAGTCCGATGTCTCCACCGTCAACAACGATCCGCG
CCATTTCGACAACGCCACGTTTGAAGAGCGCTTCCAGGATCCGCGTTACCAGCCGCCCGTCCAGGAAGACGCGGGCGGGG
CCAAGATTTCGATCAACAACGGCTGGTGGAACCCTTGGGGCACCGGCATTTTCGGCCTGAAGAACTGCGTCGTGCAGTCG
GCGCTCGGACCGGATGGCCAGGAATGCCTGAGCAGCGGCGAAGATGCCGCCATCGGCCTATTCGTGGGCAATGCCGACGA
CCAGCCTTCCGGGAAGATGGTGGACCTGGATCCGGATTGGCAGCTGGCTTCCTGTATTTACGGGCAGGTGATCACCCTGC
GCGCCGCCAACGGCCAGGTGCTGATGCGCGGCCAATACGCGCCCAATCCCTTCCGCGACCTGTGGTTCAACCGGGTGGGC
AATATCCACGGCGACAGCGCGGCGTCCGCCATCTGGCAGACCCAGCTCACCAATGTGGAATGGAATCTGGACAAGATCAA
CAGCCCGGTGCTGCAGGCCTTGAAAACCATCTGCGAGCAACAGGGCAATATCCTGTCGCTGCGGCTGACCACCTACGGCT
ACGACGACGCATTGGGCGAAAGCTTCTTCTCCTACGGCATCCTGCTGGGCGCCATCGGCCCCGCCTATCAAACCGAGCCG
CAGTCCTTCATCCTGGGCCGCCGCTTCATTCCGGCCAACAATCTGCTGCCGTCCACGGCTTACCAGGCGGAAGACTATTT
CCCCAATGTCGGCTGGTTCAGCGCGCAAGTGGTGACGAACGAGCAGACGAAAAGCAGCACCCTGTACGTGGATCTCAGCA
ATGCGCTGCCGCTGGTCTACCAACCCGCCCAGCCCCGGGCGGACGGCTCGCCCAACAGGCCGGCCGGCACGCCGGAAACG
ACCTATGTGGCCGATATCACCTGCGGCAGCGGCAGCGGCAATCCTGCGGCGCCCAAGGAAGGCAATAGCAAGCAGTTGTG
GCAACAGCCGCTGATCATCGCCCAGCTCACTTCCGCCACCTTGCCGACCAGCCCTTATCTGCAACCGGGACAAACCGCCC
CCACCCCGATAGCCTCGCAATACCAGCCGCTGGCCACCATAGACATCAGCAATGCCAACCTGCTCAGCCGCAGCGGCATC
GTCGCGGTGCCCATCCCCGAATCCATGCTGTCCAGCATCAATGAGCTGCCCCTGGCCTTGGTGACCTCGGCCAATCCCAT
TACCGGCATCGCCCTGTTGCTGTGCTGCGAAGGAAATGGCGGCTGGGAAGTGCGGGCCGATCAATTCGCGCTGCGCCTCG
ATCCCAATGACCCGGCGGCCAATACCGTGGATTCCGATGTCTACGTCGCCCAATACGGCGTGCCGCTGGCCAATGCGCCC
GTCTCGCTGGCGCTCGAGTCCACCGGCGCTCAGGTGGATGTGGGCGACTGCCCCACCGACACGCCGCCGGAAACCACGCC
CAAGGCCGCGCCGCCGACCTTCAACGTGCCCGCGGGCCAGCTCGCTTTCGTCCCGGGCCAGGCCGGCGCCGACGCCAACG
GGACGGTGCAGTACACCATCAACGCCAACACCGACGCCAACGGCATGGTGAAGTTCGCCATCAACGGCCCCCAGGCGATG
GGCTATCCGCGCTATTACATCGACGGCCAGCTGTTCAACTACAGCTACAACATCTCGCCCAGCTCCGCTAATGGCAAGCC
GACGGTGCAGCAGACCTTCGATCAGTACGTGATCGTCGTCCGCTCCACCTATGTAGTGCCCAGCAAGGTCACCTGGGACG
ACGTGCAACCGATTCTGCAGCAATACGCCAACCTGTACCCGGTGATGAGCCAGGGGCTGTTCGACTTCTCAAAGAAAGAG
CAGGCCGACGCCAACGCCTTCATCCTCAAGTTCGTGCTGGACAAGCCGGACGACGACCCGGACCAGATGCCGGTCACCCG
CGACCTGTCCAGCAGCAAGCGCCGCGCGCTGATCCAGTATTTCGACAGCGTGCTGCAGGAGCAGGGACGCCCCCCCAGCA
TGCTGGACATGTTCGGCAAGCGCTGCCCCACCCGGGGCGGCGGTTCGCGCGCGGACTGCCCGGAAGGCGCTGTCGGCTAT
GGCAAGGGCGGCAAGCCCGATTGCCCGGCCAAGTAA

Upstream 100 bases:

>100_bases
GAACTACAGCTGATGCCGCGTCAACCCGCACCGGCCATCTATACCGTATCGCATCGCAAAGCCGCTCAAGACCGTAGCAA
CCTTTTCAAGGAGCTATTGC

Downstream 100 bases:

>100_bases
CCGAGCCTCCATTCTGAAAGGGTACGAATATGCTGCGCATCAAACAGAGCATCATCAATCAGCTGCTGCAGGGCTGTGGC
CTGGATGAGCTGAAAAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MSYLQYPRLAFSGLFQSDVSTVNNDPRHFDNATFEERFQDPRYQPPVQEDAGGAKISINNGWWNPWGTGIFGLKNCVVQS
ALGPDGQECLSSGEDAAIGLFVGNADDQPSGKMVDLDPDWQLASCIYGQVITLRAANGQVLMRGQYAPNPFRDLWFNRVG
NIHGDSAASAIWQTQLTNVEWNLDKINSPVLQALKTICEQQGNILSLRLTTYGYDDALGESFFSYGILLGAIGPAYQTEP
QSFILGRRFIPANNLLPSTAYQAEDYFPNVGWFSAQVVTNEQTKSSTLYVDLSNALPLVYQPAQPRADGSPNRPAGTPET
TYVADITCGSGSGNPAAPKEGNSKQLWQQPLIIAQLTSATLPTSPYLQPGQTAPTPIASQYQPLATIDISNANLLSRSGI
VAVPIPESMLSSINELPLALVTSANPITGIALLLCCEGNGGWEVRADQFALRLDPNDPAANTVDSDVYVAQYGVPLANAP
VSLALESTGAQVDVGDCPTDTPPETTPKAAPPTFNVPAGQLAFVPGQAGADANGTVQYTINANTDANGMVKFAINGPQAM
GYPRYYIDGQLFNYSYNISPSSANGKPTVQQTFDQYVIVVRSTYVVPSKVTWDDVQPILQQYANLYPVMSQGLFDFSKKE
QADANAFILKFVLDKPDDDPDQMPVTRDLSSSKRRALIQYFDSVLQEQGRPPSMLDMFGKRCPTRGGGSRADCPEGAVGY
GKGGKPDCPAK

Sequences:

>Translated_731_residues
MSYLQYPRLAFSGLFQSDVSTVNNDPRHFDNATFEERFQDPRYQPPVQEDAGGAKISINNGWWNPWGTGIFGLKNCVVQS
ALGPDGQECLSSGEDAAIGLFVGNADDQPSGKMVDLDPDWQLASCIYGQVITLRAANGQVLMRGQYAPNPFRDLWFNRVG
NIHGDSAASAIWQTQLTNVEWNLDKINSPVLQALKTICEQQGNILSLRLTTYGYDDALGESFFSYGILLGAIGPAYQTEP
QSFILGRRFIPANNLLPSTAYQAEDYFPNVGWFSAQVVTNEQTKSSTLYVDLSNALPLVYQPAQPRADGSPNRPAGTPET
TYVADITCGSGSGNPAAPKEGNSKQLWQQPLIIAQLTSATLPTSPYLQPGQTAPTPIASQYQPLATIDISNANLLSRSGI
VAVPIPESMLSSINELPLALVTSANPITGIALLLCCEGNGGWEVRADQFALRLDPNDPAANTVDSDVYVAQYGVPLANAP
VSLALESTGAQVDVGDCPTDTPPETTPKAAPPTFNVPAGQLAFVPGQAGADANGTVQYTINANTDANGMVKFAINGPQAM
GYPRYYIDGQLFNYSYNISPSSANGKPTVQQTFDQYVIVVRSTYVVPSKVTWDDVQPILQQYANLYPVMSQGLFDFSKKE
QADANAFILKFVLDKPDDDPDQMPVTRDLSSSKRRALIQYFDSVLQEQGRPPSMLDMFGKRCPTRGGGSRADCPEGAVGY
GKGGKPDCPAK
>Mature_730_residues
SYLQYPRLAFSGLFQSDVSTVNNDPRHFDNATFEERFQDPRYQPPVQEDAGGAKISINNGWWNPWGTGIFGLKNCVVQSA
LGPDGQECLSSGEDAAIGLFVGNADDQPSGKMVDLDPDWQLASCIYGQVITLRAANGQVLMRGQYAPNPFRDLWFNRVGN
IHGDSAASAIWQTQLTNVEWNLDKINSPVLQALKTICEQQGNILSLRLTTYGYDDALGESFFSYGILLGAIGPAYQTEPQ
SFILGRRFIPANNLLPSTAYQAEDYFPNVGWFSAQVVTNEQTKSSTLYVDLSNALPLVYQPAQPRADGSPNRPAGTPETT
YVADITCGSGSGNPAAPKEGNSKQLWQQPLIIAQLTSATLPTSPYLQPGQTAPTPIASQYQPLATIDISNANLLSRSGIV
AVPIPESMLSSINELPLALVTSANPITGIALLLCCEGNGGWEVRADQFALRLDPNDPAANTVDSDVYVAQYGVPLANAPV
SLALESTGAQVDVGDCPTDTPPETTPKAAPPTFNVPAGQLAFVPGQAGADANGTVQYTINANTDANGMVKFAINGPQAMG
YPRYYIDGQLFNYSYNISPSSANGKPTVQQTFDQYVIVVRSTYVVPSKVTWDDVQPILQQYANLYPVMSQGLFDFSKKEQ
ADANAFILKFVLDKPDDDPDQMPVTRDLSSSKRRALIQYFDSVLQEQGRPPSMLDMFGKRCPTRGGGSRADCPEGAVGYG
KGGKPDCPAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78846; Mature: 78715

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLQYPRLAFSGLFQSDVSTVNNDPRHFDNATFEERFQDPRYQPPVQEDAGGAKISINN
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECC
GWWNPWGTGIFGLKNCVVQSALGPDGQECLSSGEDAAIGLFVGNADDQPSGKMVDLDPDW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCEEECCCCC
QLASCIYGQVITLRAANGQVLMRGQYAPNPFRDLWFNRVGNIHGDSAASAIWQTQLTNVE
HHHHHHHCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCE
WNLDKINSPVLQALKTICEQQGNILSLRLTTYGYDDALGESFFSYGILLGAIGPAYQTEP
ECHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC
QSFILGRRFIPANNLLPSTAYQAEDYFPNVGWFSAQVVTNEQTKSSTLYVDLSNALPLVY
HHHHHCCEECCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEE
QPAQPRADGSPNRPAGTPETTYVADITCGSGSGNPAAPKEGNSKQLWQQPLIIAQLTSAT
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCC
LPTSPYLQPGQTAPTPIASQYQPLATIDISNANLLSRSGIVAVPIPESMLSSINELPLAL
CCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCEECCCCEEEEECCHHHHHHHHHCCEEE
VTSANPITGIALLLCCEGNGGWEVRADQFALRLDPNDPAANTVDSDVYVAQYGVPLANAP
EECCCCCCEEEEEEEECCCCCEEEEECEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC
VSLALESTGAQVDVGDCPTDTPPETTPKAAPPTFNVPAGQLAFVPGQAGADANGTVQYTI
EEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEE
NANTDANGMVKFAINGPQAMGYPRYYIDGQLFNYSYNISPSSANGKPTVQQTFDQYVIVV
ECCCCCCCEEEEEECCCCCCCCCEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHEEEEE
RSTYVVPSKVTWDDVQPILQQYANLYPVMSQGLFDFSKKEQADANAFILKFVLDKPDDDP
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCC
DQMPVTRDLSSSKRRALIQYFDSVLQEQGRPPSMLDMFGKRCPTRGGGSRADCPEGAVGY
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GKGGKPDCPAK
CCCCCCCCCCC
>Mature Secondary Structure 
SYLQYPRLAFSGLFQSDVSTVNNDPRHFDNATFEERFQDPRYQPPVQEDAGGAKISINN
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECC
GWWNPWGTGIFGLKNCVVQSALGPDGQECLSSGEDAAIGLFVGNADDQPSGKMVDLDPDW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCEEECCCCC
QLASCIYGQVITLRAANGQVLMRGQYAPNPFRDLWFNRVGNIHGDSAASAIWQTQLTNVE
HHHHHHHCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCE
WNLDKINSPVLQALKTICEQQGNILSLRLTTYGYDDALGESFFSYGILLGAIGPAYQTEP
ECHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC
QSFILGRRFIPANNLLPSTAYQAEDYFPNVGWFSAQVVTNEQTKSSTLYVDLSNALPLVY
HHHHHCCEECCCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEE
QPAQPRADGSPNRPAGTPETTYVADITCGSGSGNPAAPKEGNSKQLWQQPLIIAQLTSAT
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCC
LPTSPYLQPGQTAPTPIASQYQPLATIDISNANLLSRSGIVAVPIPESMLSSINELPLAL
CCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCEECCCCEEEEECCHHHHHHHHHCCEEE
VTSANPITGIALLLCCEGNGGWEVRADQFALRLDPNDPAANTVDSDVYVAQYGVPLANAP
EECCCCCCEEEEEEEECCCCCEEEEECEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC
VSLALESTGAQVDVGDCPTDTPPETTPKAAPPTFNVPAGQLAFVPGQAGADANGTVQYTI
EEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEE
NANTDANGMVKFAINGPQAMGYPRYYIDGQLFNYSYNISPSSANGKPTVQQTFDQYVIVV
ECCCCCCCEEEEEECCCCCCCCCEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHEEEEE
RSTYVVPSKVTWDDVQPILQQYANLYPVMSQGLFDFSKKEQADANAFILKFVLDKPDDDP
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCC
DQMPVTRDLSSSKRRALIQYFDSVLQEQGRPPSMLDMFGKRCPTRGGGSRADCPEGAVGY
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GKGGKPDCPAK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA