| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is bcp [H]
Identifier: 34498270
GI number: 34498270
Start: 3065905
End: 3066360
Strand: Direct
Name: bcp [H]
Synonym: CV_2815
Alternate gene names: 34498270
Gene position: 3065905-3066360 (Clockwise)
Preceding gene: 34498269
Following gene: 34498271
Centisome position: 64.53
GC content: 62.28
Gene sequence:
>456_bases ATGACAGGCACACCCTGCCCCGACTTCACCCTGCCCGGCACCGCCGGCGCCGATTTTCAGCTCTCCTCCAGCCGCAAGCC GCTGGTGATCTACTTCTACCCCAAGGACAACACGCCCGGCTGCACCAATGAAAGCATGGCTTTCCGCGACCTCCATCCGG AATTCGCCGCGCTGGGCGCCGAAATCGTCGGCATCTCCCGCGACAGCCTGAAATCCCACCAGAACTTCAAGGCCAAGCTG GAGCTGCCGTTCGAGCTGCTGTCCGATTCCGAGGAAACCGCCTGCTCGCTGTTCGGCGTCATCAAGATGAAGAACATGTA CGGCAAGCAGGTGCGCGGCATCGAACGCAGCACCTTCGTGATCGACGCCTCAGGCAAGGTGTCGCGCGAATGGCGCGGCG TGAAAGTGCCCGGTCACGCAGAGGAGGTGCTGGCGTACGTCAAGACGCTGAAGTAG
Upstream 100 bases:
>100_bases CGGCCGGAGAGCCCCGCGACGAAGGATAACGTGACAACCGCAATGATAATCCGCTAAGCTCAAAACAAGGCGGACCCCTG CACACTACCAGGAGTTATGC
Downstream 100 bases:
>100_bases CAAGCGATACCCGCCCGGCCAGCCGGCCGGGCCAGAACATGAACAAGGGGACCACATCATGGCCGGCCGCAAAAAGACCA CCGCGTGCAAGCTGTTCGTA
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTGTPCPDFTLPGTAGADFQLSSSRKPLVIYFYPKDNTPGCTNESMAFRDLHPEFAALGAEIVGISRDSLKSHQNFKAKL ELPFELLSDSEETACSLFGVIKMKNMYGKQVRGIERSTFVIDASGKVSREWRGVKVPGHAEEVLAYVKTLK
Sequences:
>Translated_151_residues MTGTPCPDFTLPGTAGADFQLSSSRKPLVIYFYPKDNTPGCTNESMAFRDLHPEFAALGAEIVGISRDSLKSHQNFKAKL ELPFELLSDSEETACSLFGVIKMKNMYGKQVRGIERSTFVIDASGKVSREWRGVKVPGHAEEVLAYVKTLK >Mature_150_residues TGTPCPDFTLPGTAGADFQLSSSRKPLVIYFYPKDNTPGCTNESMAFRDLHPEFAALGAEIVGISRDSLKSHQNFKAKLE LPFELLSDSEETACSLFGVIKMKNMYGKQVRGIERSTFVIDASGKVSREWRGVKVPGHAEEVLAYVKTLK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=147, Percent_Identity=36.734693877551, Blast_Score=100, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6322180, Length=103, Percent_Identity=33.9805825242718, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16649; Mature: 16518
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTPCPDFTLPGTAGADFQLSSSRKPLVIYFYPKDNTPGCTNESMAFRDLHPEFAALGA CCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCHHHHHCCH EIVGISRDSLKSHQNFKAKLELPFELLSDSEETACSLFGVIKMKNMYGKQVRGIERSTFV HEEECCHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IDASGKVSREWRGVKVPGHAEEVLAYVKTLK EECCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TGTPCPDFTLPGTAGADFQLSSSRKPLVIYFYPKDNTPGCTNESMAFRDLHPEFAALGA CCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCHHHHHCCH EIVGISRDSLKSHQNFKAKLELPFELLSDSEETACSLFGVIKMKNMYGKQVRGIERSTFV HEEECCHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IDASGKVSREWRGVKVPGHAEEVLAYVKTLK EECCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]