Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497905

Identifier: 34497905

GI number: 34497905

Start: 2635525

End: 2636148

Strand: Direct

Name: 34497905

Synonym: CV_2450

Alternate gene names: NA

Gene position: 2635525-2636148 (Clockwise)

Preceding gene: 34497904

Following gene: 34497907

Centisome position: 55.47

GC content: 69.39

Gene sequence:

>624_bases
ATGAGGCGCGCGCTGGATGGCTTGCCGCCCAGGCTGCGCCACCTGCTGCTGGGCTGGGCTTCAGTAGGCTGCGCGTATTC
GCTGGGCAGCCTGTGGCCGCGGCGCGCGATCGTCCTGCCCGAGCTGCCCGTGGATCGCTGGATTCCCTTCGACCCGGCGG
CGATCTGGCTGTACGCGTCGTTTTTCCTGATCGTGCCCGTGGCCTACCTGTTCGCTCGTCCGGAAAAGTTGGCCTGGCTG
CAGCGCGCGATGCAGCTGTGCGCGCTGGCCGCGGGCGCGGTGTTCCTGCTGTGCCCGACCACCCTGGCCTACCCGCCCAT
CGTCGGGGATGGCTGGCATGCCGAGGCGCTGCGCGTCTTCCTGCGCTTCGACACCCCGCACAACTGCCTGCCCTCGCTGC
ACGGCGCGCTGACCGCCTTGTCCGCCTGGGCCTTGTGGGCCGGCCGCCGCCGGCTGCGCTCCTGGCTGGCGCTGGCGTGG
GCGCTGGCCATCCTGTTCGCCGTGATCCAACTGCGCCGCCATTTGTTCATCGACCTGTCCGCCGGCGTGGCGCTGGGGCT
GCTTTGCGGCCTGCTGGCGGCGCGGCCGGCAACTGTTTTCAATTTTTCTTATCAACGCACATGA

Upstream 100 bases:

>100_bases
GCCTGGGCGTGGATGCCGAGGCGCTGCGATGGACGCTGTCCAACCACGTTCCGGCCATGGACGCCACGCGCAAGCGCCGG
CGCATTGTCAGGGCGTTCGC

Downstream 100 bases:

>100_bases
ACGTATTCGCCCTCACCTTCGCCGTCATGCTGGCGGTCGTGCTGCTGGAGCTGTTCGCCCTGCGCTACTGGCGCAGAGAG
GCCATTCCCTGGCGCGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRRALDGLPPRLRHLLLGWASVGCAYSLGSLWPRRAIVLPELPVDRWIPFDPAAIWLYASFFLIVPVAYLFARPEKLAWL
QRAMQLCALAAGAVFLLCPTTLAYPPIVGDGWHAEALRVFLRFDTPHNCLPSLHGALTALSAWALWAGRRRLRSWLALAW
ALAILFAVIQLRRHLFIDLSAGVALGLLCGLLAARPATVFNFSYQRT

Sequences:

>Translated_207_residues
MRRALDGLPPRLRHLLLGWASVGCAYSLGSLWPRRAIVLPELPVDRWIPFDPAAIWLYASFFLIVPVAYLFARPEKLAWL
QRAMQLCALAAGAVFLLCPTTLAYPPIVGDGWHAEALRVFLRFDTPHNCLPSLHGALTALSAWALWAGRRRLRSWLALAW
ALAILFAVIQLRRHLFIDLSAGVALGLLCGLLAARPATVFNFSYQRT
>Mature_207_residues
MRRALDGLPPRLRHLLLGWASVGCAYSLGSLWPRRAIVLPELPVDRWIPFDPAAIWLYASFFLIVPVAYLFARPEKLAWL
QRAMQLCALAAGAVFLLCPTTLAYPPIVGDGWHAEALRVFLRFDTPHNCLPSLHGALTALSAWALWAGRRRLRSWLALAW
ALAILFAVIQLRRHLFIDLSAGVALGLLCGLLAARPATVFNFSYQRT

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23093; Mature: 23093

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRALDGLPPRLRHLLLGWASVGCAYSLGSLWPRRAIVLPELPVDRWIPFDPAAIWLYAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
FFLIVPVAYLFARPEKLAWLQRAMQLCALAAGAVFLLCPTTLAYPPIVGDGWHAEALRVF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHH
LRFDTPHNCLPSLHGALTALSAWALWAGRRRLRSWLALAWALAILFAVIQLRRHLFIDLS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVALGLLCGLLAARPATVFNFSYQRT
HHHHHHHHHHHHHCCCHHHEECCCCCC
>Mature Secondary Structure
MRRALDGLPPRLRHLLLGWASVGCAYSLGSLWPRRAIVLPELPVDRWIPFDPAAIWLYAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
FFLIVPVAYLFARPEKLAWLQRAMQLCALAAGAVFLLCPTTLAYPPIVGDGWHAEALRVF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHH
LRFDTPHNCLPSLHGALTALSAWALWAGRRRLRSWLALAWALAILFAVIQLRRHLFIDLS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVALGLLCGLLAARPATVFNFSYQRT
HHHHHHHHHHHHHCCCHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA