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The map label for this gene is ybjS [H]

Identifier: 34497902

GI number: 34497902

Start: 2632433

End: 2633443

Strand: Direct

Name: ybjS [H]

Synonym: CV_2447

Alternate gene names: 34497902

Gene position: 2632433-2633443 (Clockwise)

Preceding gene: 34497901

Following gene: 34497903

Centisome position: 55.41

GC content: 70.23

Gene sequence:

>1011_bases
GTGACGCGGGTGCTGGTCACCGGCGCCACCGGCGGCCTGGGGCGCAATGCCGTCGCCCACTTGCTGGACAGGGGATGCGC
GGTGCGCGCCACTGGGCGCAACCTGGCTGCGGGCCGCGAACTGGCGGCTGCGGGCGCGGAATTCGTCGCGCTGGATCTGG
CCGCCGCGGGTGAAAGCGAGCTAGCGGACCTGATGGACGGCGTGGACGCGGTATGGCATTGCGCCGCGCTTTCCGCGCCC
TGGGGACGCGAAGCCGATTTCGCCGCCGCCAACGCGCTGGCCACGGGAAAACTGCTGGATGCCGCCGGCGCGTCGCGCGC
CAGCCGCTTCATCCACGTTTCCACGCCGGCGCTGTATTTCGATTTCCGCCATCGCTACAACGTGCCGGAGGCGTTCCGCC
CGCGCCGCTTCGTCAACGCCTATGCCCGCACCAAGGCGCAGGCCGAGGACAAGGTGCAGGAGGCGACGCGCGCCTATCCC
GCGCTGCGGACCACCATTTTGCGGCCGAGGGCCATTTTCGGAGAGCACGATCAGGTGCTGATGCCCAGGCTGGCGCGCAT
GCTGAGCCGGCGCGGCGGGCGCCTGCCGCTGCCGCGCGGCGGCGCGGCGACGCTGGATCTGACCTATGTCGGCAACGTGG
TTCACGCGATGTGGCTGGCCACCTCGCATCCAGACCTCGCCAGCGGATTGGCGTTCAACATCACCAACCAGCAGCCTGTC
ATGCTGCGCGACGCGCTGACGCGGGTGTTCGTCCAGGAGCTGGGCCAGCCGCTGCGCATCGTCACCCTGCCCTACCCCTT
GCTGAGCGCGGCCAGCCGACTGGCGCAGCTGTGGGCTGCGGTCACCGGCAGGGAACCGGCATTGACGCCTTACAGCCTGG
GCGCGATTCATTTCGACATGACGCTGGACAACACCCAGGCCCGCGAGGTGCTGGGCTATCTGCCGCCGTACAGCCTGGAC
CAAGGCCTGGCGCGCACCGCGCGCTGGCTGCGGGAGCGCGGGCATGGCTAA

Upstream 100 bases:

>100_bases
TGCACGAGGCCTTTGTCGACGGCCGCGCCCGCGCCGGCAAGCGCCTGCTGATGGTGGGCACGGCGGCGGGCCTCAACCTG
GGCGGGCTGGTATGGGATCT

Downstream 100 bases:

>100_bases
CGTCACCGCCTTCAGCGTCGGGCATTGCACCCACCCCGCCTGCATGGCGCTCAAGGGCGCGGGGCTGGCCAGCCGCTGCT
TCCCGTCGCGCGCCTACCTG

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTRVLVTGATGGLGRNAVAHLLDRGCAVRATGRNLAAGRELAAAGAEFVALDLAAAGESELADLMDGVDAVWHCAALSAP
WGREADFAAANALATGKLLDAAGASRASRFIHVSTPALYFDFRHRYNVPEAFRPRRFVNAYARTKAQAEDKVQEATRAYP
ALRTTILRPRAIFGEHDQVLMPRLARMLSRRGGRLPLPRGGAATLDLTYVGNVVHAMWLATSHPDLASGLAFNITNQQPV
MLRDALTRVFVQELGQPLRIVTLPYPLLSAASRLAQLWAAVTGREPALTPYSLGAIHFDMTLDNTQAREVLGYLPPYSLD
QGLARTARWLRERGHG

Sequences:

>Translated_336_residues
MTRVLVTGATGGLGRNAVAHLLDRGCAVRATGRNLAAGRELAAAGAEFVALDLAAAGESELADLMDGVDAVWHCAALSAP
WGREADFAAANALATGKLLDAAGASRASRFIHVSTPALYFDFRHRYNVPEAFRPRRFVNAYARTKAQAEDKVQEATRAYP
ALRTTILRPRAIFGEHDQVLMPRLARMLSRRGGRLPLPRGGAATLDLTYVGNVVHAMWLATSHPDLASGLAFNITNQQPV
MLRDALTRVFVQELGQPLRIVTLPYPLLSAASRLAQLWAAVTGREPALTPYSLGAIHFDMTLDNTQAREVLGYLPPYSLD
QGLARTARWLRERGHG
>Mature_335_residues
TRVLVTGATGGLGRNAVAHLLDRGCAVRATGRNLAAGRELAAAGAEFVALDLAAAGESELADLMDGVDAVWHCAALSAPW
GREADFAAANALATGKLLDAAGASRASRFIHVSTPALYFDFRHRYNVPEAFRPRRFVNAYARTKAQAEDKVQEATRAYPA
LRTTILRPRAIFGEHDQVLMPRLARMLSRRGGRLPLPRGGAATLDLTYVGNVVHAMWLATSHPDLASGLAFNITNQQPVM
LRDALTRVFVQELGQPLRIVTLPYPLLSAASRLAQLWAAVTGREPALTPYSLGAIHFDMTLDNTQAREVLGYLPPYSLDQ
GLARTARWLRERGHG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI193211614, Length=344, Percent_Identity=27.0348837209302, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI8393516, Length=344, Percent_Identity=27.0348837209302, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI116268111, Length=364, Percent_Identity=26.6483516483516, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI310132178, Length=337, Percent_Identity=29.3768545994065, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI310113012, Length=337, Percent_Identity=29.3768545994065, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI239745448, Length=337, Percent_Identity=29.3768545994065, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI87081792, Length=334, Percent_Identity=45.5089820359281, Blast_Score=302, Evalue=2e-83,
Organism=Caenorhabditis elegans, GI17509709, Length=269, Percent_Identity=27.8810408921933, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321437, Length=348, Percent_Identity=26.7241379310345, Blast_Score=102, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 36394; Mature: 36263

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLVTGATGGLGRNAVAHLLDRGCAVRATGRNLAAGRELAAAGAEFVALDLAAAGESE
CCEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCHHCCHHHHHCCCCEEEEEHHHCCHHH
LADLMDGVDAVWHCAALSAPWGREADFAAANALATGKLLDAAGASRASRFIHVSTPALYF
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCEEEECCCEEEE
DFRHRYNVPEAFRPRRFVNAYARTKAQAEDKVQEATRAYPALRTTILRPRAIFGEHDQVL
EHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHH
MPRLARMLSRRGGRLPLPRGGAATLDLTYVGNVVHAMWLATSHPDLASGLAFNITNQQPV
HHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCH
MLRDALTRVFVQELGQPLRIVTLPYPLLSAASRLAQLWAAVTGREPALTPYSLGAIHFDM
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEE
TLDNTQAREVLGYLPPYSLDQGLARTARWLRERGHG
EECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRVLVTGATGGLGRNAVAHLLDRGCAVRATGRNLAAGRELAAAGAEFVALDLAAAGESE
CEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCHHCCHHHHHCCCCEEEEEHHHCCHHH
LADLMDGVDAVWHCAALSAPWGREADFAAANALATGKLLDAAGASRASRFIHVSTPALYF
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCEEEECCCEEEE
DFRHRYNVPEAFRPRRFVNAYARTKAQAEDKVQEATRAYPALRTTILRPRAIFGEHDQVL
EHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHH
MPRLARMLSRRGGRLPLPRGGAATLDLTYVGNVVHAMWLATSHPDLASGLAFNITNQQPV
HHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCH
MLRDALTRVFVQELGQPLRIVTLPYPLLSAASRLAQLWAAVTGREPALTPYSLGAIHFDM
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEE
TLDNTQAREVLGYLPPYSLDQGLARTARWLRERGHG
EECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]