| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497881
Identifier: 34497881
GI number: 34497881
Start: 2609238
End: 2609882
Strand: Direct
Name: 34497881
Synonym: CV_2426
Alternate gene names: NA
Gene position: 2609238-2609882 (Clockwise)
Preceding gene: 34497880
Following gene: 34497883
Centisome position: 54.92
GC content: 66.98
Gene sequence:
>645_bases ATGTGCGTCAACTTCATTCCGCCCAGCCGCGGCCAGCTACGTGAATGGTTAGGCTGCGACCCCGGCGACGGGCAATGGCC GGACGAGGCCTGGCAGGACTACCCGGCTCCCATCCTGACCCGGGATGGCTTGCGCTTCGCCAGCTATGGCTTCATTCCCA AGCGCCACCAGCCGGCGGGCGTGCGGCTCAGCACCATGAACGCCCGCGTCGAAACCATAGGCCAGCTGCGAAGCTACCGC GACGCCTGGCGCAACTGCCAGCTGTGCCTGGTGCCGATGCAGGCGTTTTATGAACCCTGCTACGAGAGCGGTCGGGCGGT GCGCACAAAGATAAGCATGGCCGACGGCGCGCCGTTCGCAGTGGCGGGCCTGTGGCGCGAATGGCGCGAGGCGGACGGCT CGATCAGCCTGGCCTTCACCCAGATCACCATCCATGCCGACGGCCACGCGGTGATGGGGCGCATGCATAGGCCCGGCGAC GAAAAGCGCTCGCTGGCCATCATCCCCGCGGCGCTTTACCAGGCGTGGCTGCATTGCCGCAATCCGGAGCAGGCGCGCGC CTTTCTGCAGCTGTTTTCCGCCGAGGCCATGCGCGCGGAAGGCGAAATCGCCGATCCGCCCCGGCAGGGATCGCTGTTCG ATTGA
Upstream 100 bases:
>100_bases GGCCGGGCTGGCGTTCTACCGCTCCGACAACGGCGTCTGGCTGATCGACGGCGTGCCGCCGGTCTTCATCCGTCAAACCG AAGCGCGATAGGGCCGGAAC
Downstream 100 bases:
>100_bases AGGCAAAAAGCCCGCAGGACGCGGGCTTGGTTCAGAAAGACGACTGGCGGCTTATTGCTGTTCGCTATGATAGCGCGTCA CCAGTTCCACTTCTTCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MCVNFIPPSRGQLREWLGCDPGDGQWPDEAWQDYPAPILTRDGLRFASYGFIPKRHQPAGVRLSTMNARVETIGQLRSYR DAWRNCQLCLVPMQAFYEPCYESGRAVRTKISMADGAPFAVAGLWREWREADGSISLAFTQITIHADGHAVMGRMHRPGD EKRSLAIIPAALYQAWLHCRNPEQARAFLQLFSAEAMRAEGEIADPPRQGSLFD
Sequences:
>Translated_214_residues MCVNFIPPSRGQLREWLGCDPGDGQWPDEAWQDYPAPILTRDGLRFASYGFIPKRHQPAGVRLSTMNARVETIGQLRSYR DAWRNCQLCLVPMQAFYEPCYESGRAVRTKISMADGAPFAVAGLWREWREADGSISLAFTQITIHADGHAVMGRMHRPGD EKRSLAIIPAALYQAWLHCRNPEQARAFLQLFSAEAMRAEGEIADPPRQGSLFD >Mature_214_residues MCVNFIPPSRGQLREWLGCDPGDGQWPDEAWQDYPAPILTRDGLRFASYGFIPKRHQPAGVRLSTMNARVETIGQLRSYR DAWRNCQLCLVPMQAFYEPCYESGRAVRTKISMADGAPFAVAGLWREWREADGSISLAFTQITIHADGHAVMGRMHRPGD EKRSLAIIPAALYQAWLHCRNPEQARAFLQLFSAEAMRAEGEIADPPRQGSLFD
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24123; Mature: 24123
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVNFIPPSRGQLREWLGCDPGDGQWPDEAWQDYPAPILTRDGLRFASYGFIPKRHQPAG CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEECCCCCHHHCCCCCCCCCCCC VRLSTMNARVETIGQLRSYRDAWRNCQLCLVPMQAFYEPCYESGRAVRTKISMADGAPFA EEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCEEEEEEEECCCCCHH VAGLWREWREADGSISLAFTQITIHADGHAVMGRMHRPGDEKRSLAIIPAALYQAWLHCR HHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCC NPEQARAFLQLFSAEAMRAEGEIADPPRQGSLFD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MCVNFIPPSRGQLREWLGCDPGDGQWPDEAWQDYPAPILTRDGLRFASYGFIPKRHQPAG CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEECCCCCHHHCCCCCCCCCCCC VRLSTMNARVETIGQLRSYRDAWRNCQLCLVPMQAFYEPCYESGRAVRTKISMADGAPFA EEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCEEEEEEEECCCCCHH VAGLWREWREADGSISLAFTQITIHADGHAVMGRMHRPGDEKRSLAIIPAALYQAWLHCR HHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCC NPEQARAFLQLFSAEAMRAEGEIADPPRQGSLFD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA