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The map label for this gene is rsgA [H]

Identifier: 34497820

GI number: 34497820

Start: 2550779

End: 2551642

Strand: Reverse

Name: rsgA [H]

Synonym: CV_2365

Alternate gene names: 34497820

Gene position: 2551642-2550779 (Counterclockwise)

Preceding gene: 34497821

Following gene: 34497819

Centisome position: 53.71

GC content: 56.6

Gene sequence:

>864_bases
ATGACAGCCAGCACCGGACAAATCATACGCAGCCACGGCCGTCGCTTCATCGTCGAGGCGGACGGCCAGACGTTCGATTG
CACCACGCGCGGCAAGCGCGTCGACTATGCCTGCGGCGACATCGTCGATATCCTGATCCAGAACCGCGAACAGGCGGTGA
TAGAGCGCGCGCATGAGCGGCGCAGCCTGCTCTACCGCCAGGACGAATGGAAAACCAAGGTGATCGCGGCCAACGTCACG
CGCATCCTGTTCGTGATCGCCGCCGTGCCCACGCCCAATGAAGAACTGCTGGGGCGGTGCCTGATCGCCGCGGAAGCCGG
GGACATCGATCCCGTGATCGTGGTCAACAAGAGCGATCTGCCGGAAACCACGGCGCTTCTGGAAAAATTGCAACTCTATG
TGAATCTGGGTTACAAGCTGGTCACATTGTCGGCGAAGCAGGATTTTTCACCGCTGAAACCCTTGCTCAGCGGACATACC
AGCGTGTTGGTCGGCCAATCCGGCATGGGCAAATCCACACTGACCAACGCGCTGCTGCCAGACGCCAATGCGCGAATCGG
CGATATTTCGGAAGCGCTTGACTCAGGCCGCCACACCACCACCCATGCCACGCTATACCACCTCGATGAAAACAGTCATC
TGATAGACTCTCCGGGCCTGCAGGAATTCGGCTTGAAACACCTGAAATCGACGGATTTAATTCATTATTTCCCTGAAATG
CGCAGATACATTGGCCAGTGTCGCTTCCATAACTGTTCGCATTGCGTGGAACCGAACTGTGCGATCATTGCAGCTGCAGA
ACAGGGAGCAATTTCTAAACATAGACTGGATCTACTGCAAAGGCTGAGCCGAGAACTAGGCTAA

Upstream 100 bases:

>100_bases
ACAATCGCGCAGTCGTGAACTTCAGCACCCACGACGCAGGCGGACTCACCCTCAACGACTTCATTTGCGCGGCCAAGACC
GAAGCCCTGTTCCGCCGCCC

Downstream 100 bases:

>100_bases
AAGGATTGTAAATAAAGTAGTACACGCTATTTATTTACTTTTTATGGCTCCCTGCATATTCTGTAATAAAAGGAAGTAAA
GATTATCCAAATATAGATTC

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTASTGQIIRSHGRRFIVEADGQTFDCTTRGKRVDYACGDIVDILIQNREQAVIERAHERRSLLYRQDEWKTKVIAANVT
RILFVIAAVPTPNEELLGRCLIAAEAGDIDPVIVVNKSDLPETTALLEKLQLYVNLGYKLVTLSAKQDFSPLKPLLSGHT
SVLVGQSGMGKSTLTNALLPDANARIGDISEALDSGRHTTTHATLYHLDENSHLIDSPGLQEFGLKHLKSTDLIHYFPEM
RRYIGQCRFHNCSHCVEPNCAIIAAAEQGAISKHRLDLLQRLSRELG

Sequences:

>Translated_287_residues
MTASTGQIIRSHGRRFIVEADGQTFDCTTRGKRVDYACGDIVDILIQNREQAVIERAHERRSLLYRQDEWKTKVIAANVT
RILFVIAAVPTPNEELLGRCLIAAEAGDIDPVIVVNKSDLPETTALLEKLQLYVNLGYKLVTLSAKQDFSPLKPLLSGHT
SVLVGQSGMGKSTLTNALLPDANARIGDISEALDSGRHTTTHATLYHLDENSHLIDSPGLQEFGLKHLKSTDLIHYFPEM
RRYIGQCRFHNCSHCVEPNCAIIAAAEQGAISKHRLDLLQRLSRELG
>Mature_286_residues
TASTGQIIRSHGRRFIVEADGQTFDCTTRGKRVDYACGDIVDILIQNREQAVIERAHERRSLLYRQDEWKTKVIAANVTR
ILFVIAAVPTPNEELLGRCLIAAEAGDIDPVIVVNKSDLPETTALLEKLQLYVNLGYKLVTLSAKQDFSPLKPLLSGHTS
VLVGQSGMGKSTLTNALLPDANARIGDISEALDSGRHTTTHATLYHLDENSHLIDSPGLQEFGLKHLKSTDLIHYFPEMR
RYIGQCRFHNCSHCVEPNCAIIAAAEQGAISKHRLDLLQRLSRELG

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=293, Percent_Identity=36.8600682593857, Blast_Score=171, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 31803; Mature: 31672

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASTGQIIRSHGRRFIVEADGQTFDCTTRGKRVDYACGDIVDILIQNREQAVIERAHER
CCCCHHHHHHHCCCEEEEEECCCEEEECCCCCEECCHHHHHHHHHHCCHHHHHHHHHHHH
RSLLYRQDEWKTKVIAANVTRILFVIAAVPTPNEELLGRCLIAAEAGDIDPVIVVNKSDL
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCEEEECCCCC
PETTALLEKLQLYVNLGYKLVTLSAKQDFSPLKPLLSGHTSVLVGQSGMGKSTLTNALLP
CHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHCC
DANARIGDISEALDSGRHTTTHATLYHLDENSHLIDSPGLQEFGLKHLKSTDLIHYFPEM
CCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHCCCHHHHHHHHH
RRYIGQCRFHNCSHCVEPNCAIIAAAEQGAISKHRLDLLQRLSRELG
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TASTGQIIRSHGRRFIVEADGQTFDCTTRGKRVDYACGDIVDILIQNREQAVIERAHER
CCCHHHHHHHCCCEEEEEECCCEEEECCCCCEECCHHHHHHHHHHCCHHHHHHHHHHHH
RSLLYRQDEWKTKVIAANVTRILFVIAAVPTPNEELLGRCLIAAEAGDIDPVIVVNKSDL
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCEEEECCCCC
PETTALLEKLQLYVNLGYKLVTLSAKQDFSPLKPLLSGHTSVLVGQSGMGKSTLTNALLP
CHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHCC
DANARIGDISEALDSGRHTTTHATLYHLDENSHLIDSPGLQEFGLKHLKSTDLIHYFPEM
CCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHCCCHHHHHHHHH
RRYIGQCRFHNCSHCVEPNCAIIAAAEQGAISKHRLDLLQRLSRELG
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA