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The map label for this gene is ytsP [H]

Identifier: 34497818

GI number: 34497818

Start: 2549312

End: 2549851

Strand: Reverse

Name: ytsP [H]

Synonym: CV_2363

Alternate gene names: 34497818

Gene position: 2549851-2549312 (Counterclockwise)

Preceding gene: 34497819

Following gene: 34497808

Centisome position: 53.67

GC content: 64.81

Gene sequence:

>540_bases
GTGTATGCTGTCCGGCCCGCCACTCATTCGCAAGCAACACCCGCCATGGCAGAAAATCTCATCATCGAAAACGGCAGCAA
GGAAGACAAGTATCAGGTTTTGCTGCCGCAAGCCCATGCGCTGATCGCCGGAGAGACAGACATCGTCGCGGCGCTGGCCA
ATCTGTCCGCCGCGCTGGCGTCCACCTTCGGCTGGCTATGGACCGGCTTCTATCTGGTCAAGGGCGAACAACTGGTGCTG
GGTCCGTTCCAGGGGCCGATCGCCTGCACGCGCATCCCGAAAGGCCGCGGCGTCTGCGGCAGCGCCTGGGCTCAGAACCG
CACGCTGCTGGTCGACGACGTCGATGCCTTTCCCGGCCATATCGCCTGCTCGTCGAGCGCACGCTCCGAGGTGGTGGTGC
CGATCCGCGACGCCTCCGGCAAGGTCGCCGCCGTGCTGGACATCGATTCCGACCAGTTGGCCAGTTTCGACCAGACCGAC
GCCGTCTATCTGGAACGCATCGTCGCGCCGCTCGCCGGACTATTCGCCCCAGCCGGCTGA

Upstream 100 bases:

>100_bases
AGCAATATCGCCATGAACGGCGGCCAGCACATGATGTAATCGCGTCAAGGCTCCGCAATACTGTTCACGCCGCCTCTCCC
GGGCGGCGTTTTCTTTTCTG

Downstream 100 bases:

>100_bases
ATGCAGGCAAACTGTGTGAAACAGGCCCGAAATATCGGGCCTGTTTTTCTGTCCGCCTGCGAATGCTACTTCTGGATGGA
CAGCAGTTCCACTTCGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MYAVRPATHSQATPAMAENLIIENGSKEDKYQVLLPQAHALIAGETDIVAALANLSAALASTFGWLWTGFYLVKGEQLVL
GPFQGPIACTRIPKGRGVCGSAWAQNRTLLVDDVDAFPGHIACSSSARSEVVVPIRDASGKVAAVLDIDSDQLASFDQTD
AVYLERIVAPLAGLFAPAG

Sequences:

>Translated_179_residues
MYAVRPATHSQATPAMAENLIIENGSKEDKYQVLLPQAHALIAGETDIVAALANLSAALASTFGWLWTGFYLVKGEQLVL
GPFQGPIACTRIPKGRGVCGSAWAQNRTLLVDDVDAFPGHIACSSSARSEVVVPIRDASGKVAAVLDIDSDQLASFDQTD
AVYLERIVAPLAGLFAPAG
>Mature_179_residues
MYAVRPATHSQATPAMAENLIIENGSKEDKYQVLLPQAHALIAGETDIVAALANLSAALASTFGWLWTGFYLVKGEQLVL
GPFQGPIACTRIPKGRGVCGSAWAQNRTLLVDDVDAFPGHIACSSSARSEVVVPIRDASGKVAAVLDIDSDQLASFDQTD
AVYLERIVAPLAGLFAPAG

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=152, Percent_Identity=45.3947368421053, Blast_Score=129, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6322781, Length=152, Percent_Identity=38.8157894736842, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18822; Mature: 18822

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAVRPATHSQATPAMAENLIIENGSKEDKYQVLLPQAHALIAGETDIVAALANLSAALA
CCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHH
STFGWLWTGFYLVKGEQLVLGPFQGPIACTRIPKGRGVCGSAWAQNRTLLVDDVDAFPGH
HHHHHHHHCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCHHCCCCEEEEECCCCCCCE
IACSSSARSEVVVPIRDASGKVAAVLDIDSDQLASFDQTDAVYLERIVAPLAGLFAPAG
EEECCCCCCEEEEEEECCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYAVRPATHSQATPAMAENLIIENGSKEDKYQVLLPQAHALIAGETDIVAALANLSAALA
CCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHH
STFGWLWTGFYLVKGEQLVLGPFQGPIACTRIPKGRGVCGSAWAQNRTLLVDDVDAFPGH
HHHHHHHHCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCHHCCCCEEEEECCCCCCCE
IACSSSARSEVVVPIRDASGKVAAVLDIDSDQLASFDQTDAVYLERIVAPLAGLFAPAG
EEECCCCCCEEEEEEECCCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]