| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497758
Identifier: 34497758
GI number: 34497758
Start: 2490941
End: 2493385
Strand: Reverse
Name: 34497758
Synonym: CV_2303
Alternate gene names: NA
Gene position: 2493385-2490941 (Counterclockwise)
Preceding gene: 34497759
Following gene: 34497757
Centisome position: 52.48
GC content: 68.47
Gene sequence:
>2445_bases ATGACCCGCAGCCAGAATGTCCTGGCCGGCCTGTTGCTGGCCGGCCTGCTCGCGCCTCACGCGGTATCCGCCGAAGGCTA TCAGACCCCGCCCCCAGAGCTGGCCGCGCTGGTCGACGCGCCGCGCACGCCGCTTCAATCGCTGAACCCGCAAGGCGATG CCGTGCTGCAGACGCACCGCCCCGGTCTGCCCGCCATCGCCGACGTCGCCCAGCCCGAACTGAAGCTGGCGGGGTTGAGA CTGAATCCCAGAATGCGTGCGGCCAGCCGTTTCGATTTCGGCAGCGCGTTGACGCTGCTGGATGTGAAAAGCGGCAAAAG CCGTCCGGTAACGGGCTTGCCGGCCAGGCCGCGCATCGCCGACAACGCCTGGTCGCCGGACGGCAAACAGGTGGCGCTCA GCCTGTGGGGGGATCGCGGCGTGGAGCTGTGGCTGCTGGATGCGGCTAGCGCCCGCGTGCGGCGATTGGGAGATTTCCAC CTGAACGCATCCAGCGGGCGCGGCTTCGCCTGGATGGGCGCTCAACTGCTGGTCAAGCTGCTGCCGGCCGGGCAAGGCCC GGCGCCGGAGAAGCCCTCCACGCCGACCGGCCCCAACATCCAGCAAAGCGCCGGCGGCGCGCTGTCGCAGACCCGGACCT ATCCCGACCTGCTGAAAACGCCATACGATGCCGACCTGCTGGACTACGAACTGAACAGCCAGCTGGCCCTGGTGGACCTG AGCGGCCGGACGAAGCTGATCGGCAAGCCCGACCGCTACCTGTCGGTGCAGGCCTCGCCCGACCGTCGATACCTGTTGGC GACCAAGCTGCAGCGCCCCTATTCCACGCTGGTGCCGCTCAACCGCTTCCCGCGGCGCATCGAAGTGTTGAACCTGCAGG GCGACAGCGTGCATCTGGTGGCCCAGCGTCCGCTGCTGGAACGGATGCCGTCCGGCAACGACGCGGTGGAAACCGGCCCG CGCGAAGTCCAGTGGCGGACCGACGCGCCGGCCACGCTGTTCTGGGCGGAAGCGCAAGACGGCGGCGATCCATCCACGCC TGCCAAGGCGCGCGACGCGCTCTACCTGCTGCCCGCGCCCTTCCAGCAGCCGCCGCTCAAGCTGCAGGAGCTGGCCAGCC GCTTCGCCGGCATCCAATGGGGCCGCGGGGATCTGGCGCTGGTCAGCGAATACTGGTGGAAAACGCGCGATCTGAAAGTC TGGCGCGTGCGGCCGGCCGAACCGGACCATGCGCCGACGCTGCTGAACCGGCGCAGTTCGGAAGATCGCTACGCCGATCC GGGCAGCCCGGCGATGGTGAGCAACGCCGACGGGCTGCCGGTGCTGCAGACCAGCCCCGACGGCGGCAGCCTGTACTTGC TGGGAGAAGGCGCCAGTCCCGAAGGAGACCGGCCCTTCATCGACCAGCTGAACCTGGCCGACAACAAGGCCACCCGGCTG TGGCGCTCGCAAGCGCCATGGTACGAAGCGCCGATGGCGGTGCTGGACGGCGGCAAAACCGCGCTGCTCAGCCGGGAGCA GGCCGACGCGCCGCCCAATCTGTACCTGAAAACGCTAGGCCAGGGCGGCGGCCTGAAGCAGCTGACCTTCTTCCCCCATC CGACGCCCCAGCTCAAGAACGTGCAGAAGCGCCAGCTGCGCTACAAGCGCGCGGATGGCATAGACCTGACCGCCACGCTG TACCTGCCGCCAGGCTACGACGCCAAGCGCGATGGCCCGCTGCCGATGCTGATGTGGGCGTATCCGGCCGAATTCAAGAG CGCCGACGCCGCCAGCCAGGTCACCGACTCGCCTTACCGTTTCAACCGCGTCGGCTACTGGGGACCGGAGGCGCTGCTGG CGCGCGGCTATGTGGTGCTGGACGACCCGTCCATGCCCATCGTCGGCGCAGGCAAACAGGAGCCCAACGACACCTATCTG CCTCAGCTCAAGATGGATGCGCAGGCCGCGGTGGACGAAGTGGTCCGCCTGGGCGTGGCCGACCGCGACCGCATCGCCAT CGGCGGCCACTCCTACGGCGCCTTCATGACCGCCAACCTGCTGGCCCACACCCGGCTGTTCCGCGCCGGCATCGCGCGCT CCGGCGCCTACAACCGCACGCTGACGCCTTTCGGCTTCCAGTCCGAAGAGCGCGACTTCTGGCAGGCGAAGGACGTTTAT CAGGCCATGTCGCCGTTCAACTACGCCGAGCAGATCAAGGACGCGTTGCTGCTGATCCACGGCGAGGCCGACAACAACCC CGGCACCTTCCCCATCCAGAGCGAGCGGATGTACCAGGCGCTGCAGGGACTGGGCGGGACGGTGCGCCTGGCGATGCTGC CGGCGGAAAGCCACGGCTACCGTGCCCGCGAATCGATACTGCACATGCTGTGGGAGGAAGACCGCTGGCTGGATCAGTTC GTGAAGCGCGCCAAGCCCCGCGCGCAGGGAACTGCCGCGCGGTAA
Upstream 100 bases:
>100_bases ATCCGGTCTGAAAATCATGCCAGATGCTTGACCGGACAGTCCGGCTGGTGCAGTTTGACTGTCCTCGCGCAACCCATCGC GCCCATGATCAGGAGAAAGC
Downstream 100 bases:
>100_bases ACGACAGCGCGCAATCGCGGCGGGAATGGACGCCGAGCCGGCCAATTGCAACCGGCTCGGCGCCGTGAGGAAATGCCTGA AGCCCGGCCGGCCCGGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glutamyl Peptidase; Peptidase S9A/B/C Family Catalytic Domain Protein; Aminoacyl Peptidase; Peptidase S9 Prolyl Oligopeptidase Active Site Region; Prolyl Oligopeptidase Family Protein; Prolyl Oligopeptidase; Histidinol Phosphate Phosphatase HisJ Family; Peptidase S9B Dipeptidylpeptidase IV-Like; Acylamino-Acid-Releasing; Acylaminoacyl-Peptidase; Exported Oligopeptidase; Peptidase; S9 Family Peptidase; X-Pro Dipeptidyl-Peptidase; Acylaminoacyl Peptidase; Secreted Protein
Number of amino acids: Translated: 814; Mature: 813
Protein sequence:
>814_residues MTRSQNVLAGLLLAGLLAPHAVSAEGYQTPPPELAALVDAPRTPLQSLNPQGDAVLQTHRPGLPAIADVAQPELKLAGLR LNPRMRAASRFDFGSALTLLDVKSGKSRPVTGLPARPRIADNAWSPDGKQVALSLWGDRGVELWLLDAASARVRRLGDFH LNASSGRGFAWMGAQLLVKLLPAGQGPAPEKPSTPTGPNIQQSAGGALSQTRTYPDLLKTPYDADLLDYELNSQLALVDL SGRTKLIGKPDRYLSVQASPDRRYLLATKLQRPYSTLVPLNRFPRRIEVLNLQGDSVHLVAQRPLLERMPSGNDAVETGP REVQWRTDAPATLFWAEAQDGGDPSTPAKARDALYLLPAPFQQPPLKLQELASRFAGIQWGRGDLALVSEYWWKTRDLKV WRVRPAEPDHAPTLLNRRSSEDRYADPGSPAMVSNADGLPVLQTSPDGGSLYLLGEGASPEGDRPFIDQLNLADNKATRL WRSQAPWYEAPMAVLDGGKTALLSREQADAPPNLYLKTLGQGGGLKQLTFFPHPTPQLKNVQKRQLRYKRADGIDLTATL YLPPGYDAKRDGPLPMLMWAYPAEFKSADAASQVTDSPYRFNRVGYWGPEALLARGYVVLDDPSMPIVGAGKQEPNDTYL PQLKMDAQAAVDEVVRLGVADRDRIAIGGHSYGAFMTANLLAHTRLFRAGIARSGAYNRTLTPFGFQSEERDFWQAKDVY QAMSPFNYAEQIKDALLLIHGEADNNPGTFPIQSERMYQALQGLGGTVRLAMLPAESHGYRARESILHMLWEEDRWLDQF VKRAKPRAQGTAAR
Sequences:
>Translated_814_residues MTRSQNVLAGLLLAGLLAPHAVSAEGYQTPPPELAALVDAPRTPLQSLNPQGDAVLQTHRPGLPAIADVAQPELKLAGLR LNPRMRAASRFDFGSALTLLDVKSGKSRPVTGLPARPRIADNAWSPDGKQVALSLWGDRGVELWLLDAASARVRRLGDFH LNASSGRGFAWMGAQLLVKLLPAGQGPAPEKPSTPTGPNIQQSAGGALSQTRTYPDLLKTPYDADLLDYELNSQLALVDL SGRTKLIGKPDRYLSVQASPDRRYLLATKLQRPYSTLVPLNRFPRRIEVLNLQGDSVHLVAQRPLLERMPSGNDAVETGP REVQWRTDAPATLFWAEAQDGGDPSTPAKARDALYLLPAPFQQPPLKLQELASRFAGIQWGRGDLALVSEYWWKTRDLKV WRVRPAEPDHAPTLLNRRSSEDRYADPGSPAMVSNADGLPVLQTSPDGGSLYLLGEGASPEGDRPFIDQLNLADNKATRL WRSQAPWYEAPMAVLDGGKTALLSREQADAPPNLYLKTLGQGGGLKQLTFFPHPTPQLKNVQKRQLRYKRADGIDLTATL YLPPGYDAKRDGPLPMLMWAYPAEFKSADAASQVTDSPYRFNRVGYWGPEALLARGYVVLDDPSMPIVGAGKQEPNDTYL PQLKMDAQAAVDEVVRLGVADRDRIAIGGHSYGAFMTANLLAHTRLFRAGIARSGAYNRTLTPFGFQSEERDFWQAKDVY QAMSPFNYAEQIKDALLLIHGEADNNPGTFPIQSERMYQALQGLGGTVRLAMLPAESHGYRARESILHMLWEEDRWLDQF VKRAKPRAQGTAAR >Mature_813_residues TRSQNVLAGLLLAGLLAPHAVSAEGYQTPPPELAALVDAPRTPLQSLNPQGDAVLQTHRPGLPAIADVAQPELKLAGLRL NPRMRAASRFDFGSALTLLDVKSGKSRPVTGLPARPRIADNAWSPDGKQVALSLWGDRGVELWLLDAASARVRRLGDFHL NASSGRGFAWMGAQLLVKLLPAGQGPAPEKPSTPTGPNIQQSAGGALSQTRTYPDLLKTPYDADLLDYELNSQLALVDLS GRTKLIGKPDRYLSVQASPDRRYLLATKLQRPYSTLVPLNRFPRRIEVLNLQGDSVHLVAQRPLLERMPSGNDAVETGPR EVQWRTDAPATLFWAEAQDGGDPSTPAKARDALYLLPAPFQQPPLKLQELASRFAGIQWGRGDLALVSEYWWKTRDLKVW RVRPAEPDHAPTLLNRRSSEDRYADPGSPAMVSNADGLPVLQTSPDGGSLYLLGEGASPEGDRPFIDQLNLADNKATRLW RSQAPWYEAPMAVLDGGKTALLSREQADAPPNLYLKTLGQGGGLKQLTFFPHPTPQLKNVQKRQLRYKRADGIDLTATLY LPPGYDAKRDGPLPMLMWAYPAEFKSADAASQVTDSPYRFNRVGYWGPEALLARGYVVLDDPSMPIVGAGKQEPNDTYLP QLKMDAQAAVDEVVRLGVADRDRIAIGGHSYGAFMTANLLAHTRLFRAGIARSGAYNRTLTPFGFQSEERDFWQAKDVYQ AMSPFNYAEQIKDALLLIHGEADNNPGTFPIQSERMYQALQGLGGTVRLAMLPAESHGYRARESILHMLWEEDRWLDQFV KRAKPRAQGTAAR
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89437; Mature: 89305
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSQNVLAGLLLAGLLAPHAVSAEGYQTPPPELAALVDAPRTPLQSLNPQGDAVLQTHR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCEEEEECC PGLPAIADVAQPELKLAGLRLNPRMRAASRFDFGSALTLLDVKSGKSRPVTGLPARPRIA CCCCHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DNAWSPDGKQVALSLWGDRGVELWLLDAASARVRRLGDFHLNASSGRGFAWMGAQLLVKL CCCCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHH LPAGQGPAPEKPSTPTGPNIQQSAGGALSQTRTYPDLLKTPYDADLLDYELNSQLALVDL HCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHHCCCCCCCCEEEECCCCEEEEEE SGRTKLIGKPDRYLSVQASPDRRYLLATKLQRPYSTLVPLNRFPRRIEVLNLQGDSVHLV CCCEEECCCCCCEEEEEECCCCEEEEHHHHCCCHHHHCCHHHCCCEEEEEEECCCCEEEE AQRPLLERMPSGNDAVETGPREVQWRTDAPATLFWAEAQDGGDPSTPAKARDALYLLPAP ECCCHHHHCCCCCCHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC FQQPPLKLQELASRFAGIQWGRGDLALVSEYWWKTRDLKVWRVRPAEPDHAPTLLNRRSS CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCC EDRYADPGSPAMVSNADGLPVLQTSPDGGSLYLLGEGASPEGDRPFIDQLNLADNKATRL CCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCCCCHHHHH WRSQAPWYEAPMAVLDGGKTALLSREQADAPPNLYLKTLGQGGGLKQLTFFPHPTPQLKN HHCCCCCHHCCHHEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHH VQKRQLRYKRADGIDLTATLYLPPGYDAKRDGPLPMLMWAYPAEFKSADAASQVTDSPYR HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCHHCCCCCHHHHCCCCCE FNRVGYWGPEALLARGYVVLDDPSMPIVGAGKQEPNDTYLPQLKMDAQAAVDEVVRLGVA ECCCCCCCHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC DRDRIAIGGHSYGAFMTANLLAHTRLFRAGIARSGAYNRTLTPFGFQSEERDFWQAKDVY CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH QAMSPFNYAEQIKDALLLIHGEADNNPGTFPIQSERMYQALQGLGGTVRLAMLPAESHGY HHHCCCCHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC RARESILHMLWEEDRWLDQFVKRAKPRAQGTAAR HHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TRSQNVLAGLLLAGLLAPHAVSAEGYQTPPPELAALVDAPRTPLQSLNPQGDAVLQTHR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCEEEEECC PGLPAIADVAQPELKLAGLRLNPRMRAASRFDFGSALTLLDVKSGKSRPVTGLPARPRIA CCCCHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DNAWSPDGKQVALSLWGDRGVELWLLDAASARVRRLGDFHLNASSGRGFAWMGAQLLVKL CCCCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHH LPAGQGPAPEKPSTPTGPNIQQSAGGALSQTRTYPDLLKTPYDADLLDYELNSQLALVDL HCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHHCCCCCCCCEEEECCCCEEEEEE SGRTKLIGKPDRYLSVQASPDRRYLLATKLQRPYSTLVPLNRFPRRIEVLNLQGDSVHLV CCCEEECCCCCCEEEEEECCCCEEEEHHHHCCCHHHHCCHHHCCCEEEEEEECCCCEEEE AQRPLLERMPSGNDAVETGPREVQWRTDAPATLFWAEAQDGGDPSTPAKARDALYLLPAP ECCCHHHHCCCCCCHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC FQQPPLKLQELASRFAGIQWGRGDLALVSEYWWKTRDLKVWRVRPAEPDHAPTLLNRRSS CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCC EDRYADPGSPAMVSNADGLPVLQTSPDGGSLYLLGEGASPEGDRPFIDQLNLADNKATRL CCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCCCCHHHHH WRSQAPWYEAPMAVLDGGKTALLSREQADAPPNLYLKTLGQGGGLKQLTFFPHPTPQLKN HHCCCCCHHCCHHEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHH VQKRQLRYKRADGIDLTATLYLPPGYDAKRDGPLPMLMWAYPAEFKSADAASQVTDSPYR HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCHHCCCCCHHHHCCCCCE FNRVGYWGPEALLARGYVVLDDPSMPIVGAGKQEPNDTYLPQLKMDAQAAVDEVVRLGVA ECCCCCCCHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC DRDRIAIGGHSYGAFMTANLLAHTRLFRAGIARSGAYNRTLTPFGFQSEERDFWQAKDVY CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH QAMSPFNYAEQIKDALLLIHGEADNNPGTFPIQSERMYQALQGLGGTVRLAMLPAESHGY HHHCCCCHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC RARESILHMLWEEDRWLDQFVKRAKPRAQGTAAR HHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA