Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is yigI [C]

Identifier: 34497754

GI number: 34497754

Start: 2487998

End: 2488465

Strand: Direct

Name: yigI [C]

Synonym: CV_2299

Alternate gene names: 34497754

Gene position: 2487998-2488465 (Clockwise)

Preceding gene: 34497753

Following gene: 34497755

Centisome position: 52.37

GC content: 65.81

Gene sequence:

>468_bases
ATGATCCCGACGCCGGCCAATCCCCGGATACTGGAGACGATGAGCCAGCTCTTCGTCTCCTTTCCCCACTGCGCGACGCT
GGGCTTCGAATACGTCGGCACCGACGGCCGCAAGCCCACGCTGAAGCTGCAATGGCGCGAGGATCTGGTGGGCAATCCGG
CCACCGGCATCCTCCACGGCGGGGTGATCACCTCGCTGGTGGATACCTGCAGCGCCATCGCCGTCACCGCGCACCTGCCG
GAGCTGGAAACCATCGCCACGCTGGATCTGCGCATCGATTACCTGAAGTCCGCCACGCCGGGCAAGGCCATCCACTGCAC
TGCGGAGTGCTACCGGCTGGCCAGCCAGATCGCGTTCACCCGGGCCGTCTGCTATCACGACAATCCGGCTGATCCGATCG
CCCACGGCGTCGCCACCTTCATGCGGGAATCCAGCCGCACGCCGATGCTGCAGGAGGACGGACGATGA

Upstream 100 bases:

>100_bases
GCGAGAAGCTGATCGGTCTGGAGATCGTGGCCGAGTCCGAGGCCGAGTGCGCCGAAGGCGAAACCGAGGGCGGCGACGCG
CCGGAGCAGGGCGAAGCGTG

Downstream 100 bases:

>100_bases
GCGAATTCATGCAACGCTTCGCCGACTTGCGCGATCGCAAGGCCTATGCCGAGATCGTGGACGCGCTGCCCTACGTCAAG
CTGATGGGCACCTCGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Conserved Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHGGVITSLVDTCSAIAVTAHLP
ELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFTRAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR

Sequences:

>Translated_155_residues
MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHGGVITSLVDTCSAIAVTAHLP
ELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFTRAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR
>Mature_155_residues
MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHGGVITSLVDTCSAIAVTAHLP
ELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFTRAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16896; Mature: 16896

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHG
CCCCCCCCHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHH
GVITSLVDTCSAIAVTAHLPELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
RAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIPTPANPRILETMSQLFVSFPHCATLGFEYVGTDGRKPTLKLQWREDLVGNPATGILHG
CCCCCCCCHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHH
GVITSLVDTCSAIAVTAHLPELETIATLDLRIDYLKSATPGKAIHCTAECYRLASQIAFT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
RAVCYHDNPADPIAHGVATFMRESSRTPMLQEDGR
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA