| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497677
Identifier: 34497677
GI number: 34497677
Start: 2396565
End: 2398163
Strand: Direct
Name: 34497677
Synonym: CV_2222
Alternate gene names: NA
Gene position: 2396565-2398163 (Clockwise)
Preceding gene: 34497675
Following gene: 34497678
Centisome position: 50.44
GC content: 65.48
Gene sequence:
>1599_bases GTGTCTGACGACGGGGCCCTGGCGGCCCCGTTTTTTAGAGCCGCCGACAAAAAACGGATCCTGGACTGCGCCTCCCTGCG TCGAACGATTGGCACGGCCCGCGGCGCTTTGGACCAGAGGCTCCGCGAGTTTTTGTCAGCGGACCTTGGGAGAAAGCTGA ATGCGCATCACCACCGAAGAGCGGGCGCGAAGCGTCCGCAATATGTACGCCTGCCTGGCGCTGCATCCGGCGGCCAGGGA CAAGGCGGCCTCGGGAGAGCCCATCCGCCTGTTGCTGGGATTCGACGCGTTTCACGGCGAGGTCGCCGCGGACATCGCCG AGGGTGCCGGGGAGAGCATGGCCGCGGACATCCGCCTGGCAGAGTTGGAGTGCGAGAGCGCGGACGCGCTGACCGCCGCC ATCGAACAATGCGATGTCTTCATTTTCCTGTACCGCTCGTCCACGTTGCCGTCTGTCGATCCGCGCGGCCCGGCCTTCCT GCTGCCGATCAAGCACGCGATGCAGTCCCATTGGAAGAAATCCATCTTGTTCAAGGACTACGGGGCCTATTTCTACGAGG CGTTCTCCGAGCCGCGGGCGCGGATGGCGGAGCGCAATCGCCGCCTGATCGCGCTGGCGGAGCAAGCCGGATACGTGGCG TTCGAGCAGGAGGGCGGCGGATGGCTCCGCGGCTCGATCCGGCCCGATCAATCCTGGACCTCGATAGACGGCGACGGCAA TGTCGACCTCGTTCCTGGAGAGATCGCCACCTCCCTTCCCGATCTGAAGGGCGAGGTGCGTTTCAGCGGCGCCTTTCTCA GCACGATACCGTTCGCCGCCAAGTACGGCGTGGTCCGCGATTTCGCGACGCTGCGCATCCGCGATGGCCGGGTGGCGGAC TTCAGTTGCGGCGACGCGCGCTTCTCGGCGGATTTCGACAAGTATCTGAGCGCCAACCCCGGCAACGCCGCTGTGGCGGA GTTCGGCATCGGCACCAACTGCGGGGTGAAGGGACTGTACGGACTCAACGCCGGCTTCGAGGAGCGCCACCCAGGACTGC ATCTGGGCCTGGGCGGCGGCGAGCTGGGCAGCCATCACTTGGACCTGATCTTTTCCGGCGGCCGGCTGCGCTTCGGCGAC AAGGTCTTCTTCGACGGCGGCTTTTCGATTTAGCTGAATACCGCGGTGAAGTCGTCGGGGATGTTCAGCCGGTATTCCCC ATCCACCAGGACGAAATAGCAGTTCAGCTGGTTCGCGGCCTGGTTGGCGTCGGTGTCCAGCACGTCGCCGGGGACTTGTA TGGTGTCGAAGACGATCACGCCGGAATTGACGGTCTGGCCCGCCGGCACATCGAAGGCGTTTCCGGGCGCGTCGGGCACG ACGCGGATGGTGACGGCGGTGTTGTTGGTAAGAGGGCAGTTGTTCAGCGCGAGCGACATGGCGGTCTCCAGAGCGGGGCC GTCGCGGAATGCGCCGGCTCGCTCCATGGACGCTGGCTGAGGCCGGATGCGAAGCCTCGCGCGGCGCTTGCTCAGCCCGG GTCCAGCCGGCACGCCTTGCCGGTGCCGGCGAAGCCGCCGTACAGCTTCATCTGGTCCGGCGTTTTGCGGGAAATGTAA
Upstream 100 bases:
>100_bases GGAAGAAACCTTCGCCGAAGCGGTGGAAATGATGCAGGACAAGGCCGTCGTGCCGTTCGGCACCGCATTGTGGCCGGTCT GATAGGCATCAGCCGAATCC
Downstream 100 bases:
>100_bases AAACTGTCCGGCAGCGATTTTCCCGCCAGCGGCTTGGGCCAGGTCAGCAGGCCTTTCTCGTCCATATATCCCTTGAAGCG CTCACCGCCGCGGAATACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MSDDGALAAPFFRAADKKRILDCASLRRTIGTARGALDQRLREFLSADLGRKLNAHHHRRAGAKRPQYVRLPGAASGGQG QGGLGRAHPPVAGIRRVSRRGRRGHRRGCRGEHGRGHPPGRVGVRERGRADRRHRTMRCLHFPVPLVHVAVCRSARPGLP AADQARDAVPLEEIHLVQGLRGLFLRGVLRAAGADGGAQSPPDRAGGASRIRGVRAGGRRMAPRLDPARSILDLDRRRRQ CRPRSWRDRHLPSRSEGRGAFQRRLSQHDTVRRQVRRGPRFRDAAHPRWPGGGLQLRRRALLGGFRQVSERQPRQRRCGG VRHRHQLRGEGTVRTQRRLRGAPPRTASGPGRRRAGQPSLGPDLFRRPAALRRQGLLRRRLFDLAEYRGEVVGDVQPVFP IHQDEIAVQLVRGLVGVGVQHVAGDLYGVEDDHAGIDGLARRHIEGVSGRVGHDADGDGGVVGKRAVVQRERHGGLQSGA VAECAGSLHGRWLRPDAKPRAALAQPGSSRHALPVPAKPPYSFIWSGVLREM
Sequences:
>Translated_532_residues MSDDGALAAPFFRAADKKRILDCASLRRTIGTARGALDQRLREFLSADLGRKLNAHHHRRAGAKRPQYVRLPGAASGGQG QGGLGRAHPPVAGIRRVSRRGRRGHRRGCRGEHGRGHPPGRVGVRERGRADRRHRTMRCLHFPVPLVHVAVCRSARPGLP AADQARDAVPLEEIHLVQGLRGLFLRGVLRAAGADGGAQSPPDRAGGASRIRGVRAGGRRMAPRLDPARSILDLDRRRRQ CRPRSWRDRHLPSRSEGRGAFQRRLSQHDTVRRQVRRGPRFRDAAHPRWPGGGLQLRRRALLGGFRQVSERQPRQRRCGG VRHRHQLRGEGTVRTQRRLRGAPPRTASGPGRRRAGQPSLGPDLFRRPAALRRQGLLRRRLFDLAEYRGEVVGDVQPVFP IHQDEIAVQLVRGLVGVGVQHVAGDLYGVEDDHAGIDGLARRHIEGVSGRVGHDADGDGGVVGKRAVVQRERHGGLQSGA VAECAGSLHGRWLRPDAKPRAALAQPGSSRHALPVPAKPPYSFIWSGVLREM >Mature_531_residues SDDGALAAPFFRAADKKRILDCASLRRTIGTARGALDQRLREFLSADLGRKLNAHHHRRAGAKRPQYVRLPGAASGGQGQ GGLGRAHPPVAGIRRVSRRGRRGHRRGCRGEHGRGHPPGRVGVRERGRADRRHRTMRCLHFPVPLVHVAVCRSARPGLPA ADQARDAVPLEEIHLVQGLRGLFLRGVLRAAGADGGAQSPPDRAGGASRIRGVRAGGRRMAPRLDPARSILDLDRRRRQC RPRSWRDRHLPSRSEGRGAFQRRLSQHDTVRRQVRRGPRFRDAAHPRWPGGGLQLRRRALLGGFRQVSERQPRQRRCGGV RHRHQLRGEGTVRTQRRLRGAPPRTASGPGRRRAGQPSLGPDLFRRPAALRRQGLLRRRLFDLAEYRGEVVGDVQPVFPI HQDEIAVQLVRGLVGVGVQHVAGDLYGVEDDHAGIDGLARRHIEGVSGRVGHDADGDGGVVGKRAVVQRERHGGLQSGAV AECAGSLHGRWLRPDAKPRAALAQPGSSRHALPVPAKPPYSFIWSGVLREM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58519; Mature: 58388
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDGALAAPFFRAADKKRILDCASLRRTIGTARGALDQRLREFLSADLGRKLNAHHHRR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAKRPQYVRLPGAASGGQGQGGLGRAHPPVAGIRRVSRRGRRGHRRGCRGEHGRGHPPG CCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RVGVRERGRADRRHRTMRCLHFPVPLVHVAVCRSARPGLPAADQARDAVPLEEIHLVQGL CCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHH RGLFLRGVLRAAGADGGAQSPPDRAGGASRIRGVRAGGRRMAPRLDPARSILDLDRRRRQ HHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH CRPRSWRDRHLPSRSEGRGAFQRRLSQHDTVRRQVRRGPRFRDAAHPRWPGGGLQLRRRA CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH LLGGFRQVSERQPRQRRCGGVRHRHQLRGEGTVRTQRRLRGAPPRTASGPGRRRAGQPSL HHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC GPDLFRRPAALRRQGLLRRRLFDLAEYRGEVVGDVQPVFPIHQDEIAVQLVRGLVGVGVQ CHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH HVAGDLYGVEDDHAGIDGLARRHIEGVSGRVGHDADGDGGVVGKRAVVQRERHGGLQSGA HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH VAECAGSLHGRWLRPDAKPRAALAQPGSSRHALPVPAKPPYSFIWSGVLREM HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SDDGALAAPFFRAADKKRILDCASLRRTIGTARGALDQRLREFLSADLGRKLNAHHHRR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAKRPQYVRLPGAASGGQGQGGLGRAHPPVAGIRRVSRRGRRGHRRGCRGEHGRGHPPG CCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RVGVRERGRADRRHRTMRCLHFPVPLVHVAVCRSARPGLPAADQARDAVPLEEIHLVQGL CCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHH RGLFLRGVLRAAGADGGAQSPPDRAGGASRIRGVRAGGRRMAPRLDPARSILDLDRRRRQ HHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH CRPRSWRDRHLPSRSEGRGAFQRRLSQHDTVRRQVRRGPRFRDAAHPRWPGGGLQLRRRA CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH LLGGFRQVSERQPRQRRCGGVRHRHQLRGEGTVRTQRRLRGAPPRTASGPGRRRAGQPSL HHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC GPDLFRRPAALRRQGLLRRRLFDLAEYRGEVVGDVQPVFPIHQDEIAVQLVRGLVGVGVQ CHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH HVAGDLYGVEDDHAGIDGLARRHIEGVSGRVGHDADGDGGVVGKRAVVQRERHGGLQSGA HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH VAECAGSLHGRWLRPDAKPRAALAQPGSSRHALPVPAKPPYSFIWSGVLREM HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA