| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is trpE [H]
Identifier: 34497634
GI number: 34497634
Start: 2351524
End: 2352990
Strand: Reverse
Name: trpE [H]
Synonym: CV_2179
Alternate gene names: 34497634
Gene position: 2352990-2351524 (Counterclockwise)
Preceding gene: 34497635
Following gene: 34497631
Centisome position: 49.53
GC content: 67.01
Gene sequence:
>1467_bases ATGCAAGCGCAAGAGTTTGACCAACTGGCCGCCGCCGGCTACAACCGCATCCCCGTCACCCAGGAACTGCTGGCCGATCT GGACAGCCCGCTGTCCATCTATCTGAAGCTGGCCAACCAGCCGTACAGCTACCTGCTGGAATCGGTGGTGGGCGGCGAGC GCCACGGCCGCTACTCCATCATCGGCCTGCCGGCCGACACCCGGCTGCGCGTCAACGGCCAGCGGGTGCAGGTGGAATGC GGCGACAAGGTGATAGAACGCCACGACGGCGACCCGCTGGCCTTCATCGAGGCGTTCCAGCACCGTTTCCGTATCCCCGA GCTGCCCGGCCTGCCGCGCTACTCCGGCGGCCTGGTCGGCTATTTCGGCTACGACACCATACGCTACATTGAACGCCGCC TCGCCGACGTTCAGAAACCCGACCCGGTGGGCACACCGGACATCCTGCTGATGCTGTCGGAAGAGATCGCCGTGGTCGAC AACCTGTCCGGCAAGCTCTACCTGGTGGTCTACGCCGACCCCGAGGTGCCCAACGCGCTGCAGAAAGCGAAAGCGCGGCT GGCCCAGCTTCGCGCCAAGCTGCGCGAGCCGCTGGCCATCCCGCTGTCGCTGCCCCAGCCGCACGAGGGCGAGGCGGTGT CGGAATACGGCGAGGAGGCGTTCAAGCAGGCGGTGGCGTCCTGTCAGCGCTACATCCACGACGGCGACATCATGCAGGTG GTGCTGGCCCAGCGCATGCAGCAGCCTTACCACGGCTCGCCGATCGCGCTGTACCGCGCGCTGCGCAACCTCAACCCGTC GCCGTACATGTTCTTCTACCACTTCGACGACTTCCACGTGGTGGGCGCTTCGCCGGAAATCCTGGTGCGGCGCGAAGGCG AAACCGTGACCGTGCGTCCGATCGCCGGCACCCGCCCGCGCGGCCACACCCGCGAGCAGGATGAGGCGCTGGCGGCCGAG CTGCTGGCCGACCCCAAGGAAATCGCCGAACACGTGATGCTGATGGACCTGGGCCGCAACGACGTCGGCCGCGTCGCCGA CATCGGCACGGTGAAGATCACCGACAACATGGCGATCGAGCGCTACTCGCACGTGATGCACATCGTGTCCAACGTGGAAG GCCAGGTGGACCGCAAGATCAGCAATATCGACGTGATCAAGGCCACCTTCCCCGCCGGCACGCTGTCCGGCGCGCCCAAG GTGCGGGCGATGCAGATCATCGACGAGTTCGAGCCGACCAAGCGCGGCGTCTACGGCGGCGCGGTGGGTTACCTCGGCTT CAACGGCGACATGGACCTCGCCATCGCCATCCGCACCGCGGTGCTGAAGAACGGCATGCTCTACGTGCAGTCCGGCGCCG GCGTCGTCGCCGACTCGGTGCCGCAATCGGAATGGCAGGAAACGCAGAACAAGGCGCGCGCGGTGCTGCGCGCCGCGCAG ATGGTGCGGGACGGCCTGGACGCCTGA
Upstream 100 bases:
>100_bases CCCATGGCCTTTCTTCCCTGCCCCGCCAGCTGGCGATGGCGTCGCCCGGTCCCCGCCCCGCACGACTCCGCCCACACTGA CAAGACACAGGAAGAACCAC
Downstream 100 bases:
>100_bases GCCTCCGTCACATGAAACGCCGGCCGCTGCCGGCGTTTCATGCCGCCAGATCCCTGCCCACCTGCCAGGACAAAGGCAGG GTCAATAACAGGAAGGCGGC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MQAQEFDQLAAAGYNRIPVTQELLADLDSPLSIYLKLANQPYSYLLESVVGGERHGRYSIIGLPADTRLRVNGQRVQVEC GDKVIERHDGDPLAFIEAFQHRFRIPELPGLPRYSGGLVGYFGYDTIRYIERRLADVQKPDPVGTPDILLMLSEEIAVVD NLSGKLYLVVYADPEVPNALQKAKARLAQLRAKLREPLAIPLSLPQPHEGEAVSEYGEEAFKQAVASCQRYIHDGDIMQV VLAQRMQQPYHGSPIALYRALRNLNPSPYMFFYHFDDFHVVGASPEILVRREGETVTVRPIAGTRPRGHTREQDEALAAE LLADPKEIAEHVMLMDLGRNDVGRVADIGTVKITDNMAIERYSHVMHIVSNVEGQVDRKISNIDVIKATFPAGTLSGAPK VRAMQIIDEFEPTKRGVYGGAVGYLGFNGDMDLAIAIRTAVLKNGMLYVQSGAGVVADSVPQSEWQETQNKARAVLRAAQ MVRDGLDA
Sequences:
>Translated_488_residues MQAQEFDQLAAAGYNRIPVTQELLADLDSPLSIYLKLANQPYSYLLESVVGGERHGRYSIIGLPADTRLRVNGQRVQVEC GDKVIERHDGDPLAFIEAFQHRFRIPELPGLPRYSGGLVGYFGYDTIRYIERRLADVQKPDPVGTPDILLMLSEEIAVVD NLSGKLYLVVYADPEVPNALQKAKARLAQLRAKLREPLAIPLSLPQPHEGEAVSEYGEEAFKQAVASCQRYIHDGDIMQV VLAQRMQQPYHGSPIALYRALRNLNPSPYMFFYHFDDFHVVGASPEILVRREGETVTVRPIAGTRPRGHTREQDEALAAE LLADPKEIAEHVMLMDLGRNDVGRVADIGTVKITDNMAIERYSHVMHIVSNVEGQVDRKISNIDVIKATFPAGTLSGAPK VRAMQIIDEFEPTKRGVYGGAVGYLGFNGDMDLAIAIRTAVLKNGMLYVQSGAGVVADSVPQSEWQETQNKARAVLRAAQ MVRDGLDA >Mature_488_residues MQAQEFDQLAAAGYNRIPVTQELLADLDSPLSIYLKLANQPYSYLLESVVGGERHGRYSIIGLPADTRLRVNGQRVQVEC GDKVIERHDGDPLAFIEAFQHRFRIPELPGLPRYSGGLVGYFGYDTIRYIERRLADVQKPDPVGTPDILLMLSEEIAVVD NLSGKLYLVVYADPEVPNALQKAKARLAQLRAKLREPLAIPLSLPQPHEGEAVSEYGEEAFKQAVASCQRYIHDGDIMQV VLAQRMQQPYHGSPIALYRALRNLNPSPYMFFYHFDDFHVVGASPEILVRREGETVTVRPIAGTRPRGHTREQDEALAAE LLADPKEIAEHVMLMDLGRNDVGRVADIGTVKITDNMAIERYSHVMHIVSNVEGQVDRKISNIDVIKATFPAGTLSGAPK VRAMQIIDEFEPTKRGVYGGAVGYLGFNGDMDLAIAIRTAVLKNGMLYVQSGAGVVADSVPQSEWQETQNKARAVLRAAQ MVRDGLDA
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=398, Percent_Identity=41.4572864321608, Blast_Score=261, Evalue=9e-71, Organism=Escherichia coli, GI1788114, Length=462, Percent_Identity=32.2510822510823, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI87082077, Length=267, Percent_Identity=27.3408239700375, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786809, Length=213, Percent_Identity=30.0469483568075, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320935, Length=474, Percent_Identity=38.8185654008439, Blast_Score=297, Evalue=3e-81, Organism=Saccharomyces cerevisiae, GI6324361, Length=495, Percent_Identity=25.6565656565657, Blast_Score=147, Evalue=4e-36,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54023; Mature: 54023
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQEFDQLAAAGYNRIPVTQELLADLDSPLSIYLKLANQPYSYLLESVVGGERHGRYSI CCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEHHEECCCCHHHHHHHHHCCCCCCCEEE IGLPADTRLRVNGQRVQVECGDKVIERHDGDPLAFIEAFQHRFRIPELPGLPRYSGGLVG EECCCCCEEEECCCEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEE YFGYDTIRYIERRLADVQKPDPVGTPDILLMLSEEIAVVDNLSGKLYLVVYADPEVPNAL EEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHEEECCCCCEEEEEEECCCCCHHH QKAKARLAQLRAKLREPLAIPLSLPQPHEGEAVSEYGEEAFKQAVASCQRYIHDGDIMQV HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VLAQRMQQPYHGSPIALYRALRNLNPSPYMFFYHFDDFHVVGASPEILVRREGETVTVRP HHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCEEEEECCCEEEEEE IAGTRPRGHTREQDEALAAELLADPKEIAEHVMLMDLGRNDVGRVADIGTVKITDNMAIE CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCEEEEECCHHHH RYSHVMHIVSNVEGQVDRKISNIDVIKATFPAGTLSGAPKVRAMQIIDEFEPTKRGVYGG HHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHCCCCCC AVGYLGFNGDMDLAIAIRTAVLKNGMLYVQSGAGVVADSVPQSEWQETQNKARAVLRAAQ EEEEEEECCCCEEHHHHHHHHHHCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHH MVRDGLDA HHHHCCCC >Mature Secondary Structure MQAQEFDQLAAAGYNRIPVTQELLADLDSPLSIYLKLANQPYSYLLESVVGGERHGRYSI CCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEHHEECCCCHHHHHHHHHCCCCCCCEEE IGLPADTRLRVNGQRVQVECGDKVIERHDGDPLAFIEAFQHRFRIPELPGLPRYSGGLVG EECCCCCEEEECCCEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEE YFGYDTIRYIERRLADVQKPDPVGTPDILLMLSEEIAVVDNLSGKLYLVVYADPEVPNAL EEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHEEECCCCCEEEEEEECCCCCHHH QKAKARLAQLRAKLREPLAIPLSLPQPHEGEAVSEYGEEAFKQAVASCQRYIHDGDIMQV HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VLAQRMQQPYHGSPIALYRALRNLNPSPYMFFYHFDDFHVVGASPEILVRREGETVTVRP HHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCEEEEECCCEEEEEE IAGTRPRGHTREQDEALAAELLADPKEIAEHVMLMDLGRNDVGRVADIGTVKITDNMAIE CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCEEEEECCHHHH RYSHVMHIVSNVEGQVDRKISNIDVIKATFPAGTLSGAPKVRAMQIIDEFEPTKRGVYGG HHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHCCCCCC AVGYLGFNGDMDLAIAIRTAVLKNGMLYVQSGAGVVADSVPQSEWQETQNKARAVLRAAQ EEEEEEECCCCEEHHHHHHHHHHCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHH MVRDGLDA HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10417653 [H]