| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497575
Identifier: 34497575
GI number: 34497575
Start: 2307753
End: 2308646
Strand: Reverse
Name: 34497575
Synonym: CV_2120
Alternate gene names: NA
Gene position: 2308646-2307753 (Counterclockwise)
Preceding gene: 34497576
Following gene: 34497574
Centisome position: 48.59
GC content: 68.34
Gene sequence:
>894_bases ATGTTTGCGCTCCTGGGCGAGGTCCAATTCGACCTCATCACCTATTTCGACGGCTTCGAGTCGCAGTTCGGCGCCGACTA TGCCGAGCACGCGCTGATTGAGGGTAAGCCGCGGCTGCAGTGGATGGCGGACAAGCTGGATGAAATCCGCATCCAGTTAT CGTTCCACAGCCAGTTCTGCGATCCGGAAGCCGAGCTGCTGAAGCTGCGCCAGGCGCAGGCAGACCACAAGGCCATGGCG CTGGTGCTGGGCAACGGTGACTACAAGGGCTGGTTTGTCCTGACCGATTTGCAGGCCACCAGCAAGCAAACCGACAAGGC CGGCACGCTGCTGGCCCTGGAGGCCAGCATCACCTTGCGCGAGTACGTGGGCGACAAGAAGAAGCCGCTGCCGCCCGCAG TGCAGCCGGCGCAGCCACCGGCCGCGGCCGTCGCCTCTCCGGTGGGCCAGGCCGCCGGTAAGCTGAAGACAGCCACCTCG TCGGTGCGGGACAACATCCGCCAGGCGGTGGCCTATGCCAACCAGGGCCAGGCCGCCATCCGCCTGGCGCGCGACTCGGC CCAGCTGGCCCGGCAGATGGCCAGCAATCCGCAAGCCGCCCTCGGCCGGATGTCCGGCTTGCTGGCCGATGCCCAGCGCG CGGCAACGCCGCTGCAGCAACTGGCCGAGGTGAGCGGCAAGCTGCCCGAGGCCGCCGGCATCGCCCGCGCCGGCGCCAAT GCCCTGGCCGCGGTGCGCAGCGCGCAGAACACCCTGGGCTCGGTCAACGCCGGCAATCTGGCCGGCAAGCTGGATATCTA CGCGGGCTACCTGGGCGCGGCCGGCAGCGTGCTGGATGCCGCGTCGCCGGCCATCAGCAAGCTGGCTGCCAAGGTCATCA CGAGGGCCATCTGA
Upstream 100 bases:
>100_bases TCAAGGCCGCTGTCCAGTCCGGGCTGCAGCTGTCGATGCATGAGCTGGAGCAGATGATGCGCCGCGTCTGGGCGCAGCAG GAACGGAGGGCCTTCAAATA
Downstream 100 bases:
>100_bases TGTTCCTGAACCACATTACCCGCGAGGGCGAGCGCTGGGACCAGATCGCCTGGCACTACTACGGCGACGCACTGGCCTAC GAGCAGATCATCGCCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MFALLGEVQFDLITYFDGFESQFGADYAEHALIEGKPRLQWMADKLDEIRIQLSFHSQFCDPEAELLKLRQAQADHKAMA LVLGNGDYKGWFVLTDLQATSKQTDKAGTLLALEASITLREYVGDKKKPLPPAVQPAQPPAAAVASPVGQAAGKLKTATS SVRDNIRQAVAYANQGQAAIRLARDSAQLARQMASNPQAALGRMSGLLADAQRAATPLQQLAEVSGKLPEAAGIARAGAN ALAAVRSAQNTLGSVNAGNLAGKLDIYAGYLGAAGSVLDAASPAISKLAAKVITRAI
Sequences:
>Translated_297_residues MFALLGEVQFDLITYFDGFESQFGADYAEHALIEGKPRLQWMADKLDEIRIQLSFHSQFCDPEAELLKLRQAQADHKAMA LVLGNGDYKGWFVLTDLQATSKQTDKAGTLLALEASITLREYVGDKKKPLPPAVQPAQPPAAAVASPVGQAAGKLKTATS SVRDNIRQAVAYANQGQAAIRLARDSAQLARQMASNPQAALGRMSGLLADAQRAATPLQQLAEVSGKLPEAAGIARAGAN ALAAVRSAQNTLGSVNAGNLAGKLDIYAGYLGAAGSVLDAASPAISKLAAKVITRAI >Mature_297_residues MFALLGEVQFDLITYFDGFESQFGADYAEHALIEGKPRLQWMADKLDEIRIQLSFHSQFCDPEAELLKLRQAQADHKAMA LVLGNGDYKGWFVLTDLQATSKQTDKAGTLLALEASITLREYVGDKKKPLPPAVQPAQPPAAAVASPVGQAAGKLKTATS SVRDNIRQAVAYANQGQAAIRLARDSAQLARQMASNPQAALGRMSGLLADAQRAATPLQQLAEVSGKLPEAAGIARAGAN ALAAVRSAQNTLGSVNAGNLAGKLDIYAGYLGAAGSVLDAASPAISKLAAKVITRAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31179; Mature: 31179
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFALLGEVQFDLITYFDGFESQFGADYAEHALIEGKPRLQWMADKLDEIRIQLSFHSQFC CCEEHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCC DPEAELLKLRQAQADHKAMALVLGNGDYKGWFVLTDLQATSKQTDKAGTLLALEASITLR CCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECHHHCCCCCCCCCEEEEEHHHHHH EYVGDKKKPLPPAVQPAQPPAAAVASPVGQAAGKLKTATSSVRDNIRQAVAYANQGQAAI HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RLARDSAQLARQMASNPQAALGRMSGLLADAQRAATPLQQLAEVSGKLPEAAGIARAGAN HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHH ALAAVRSAQNTLGSVNAGNLAGKLDIYAGYLGAAGSVLDAASPAISKLAAKVITRAI HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MFALLGEVQFDLITYFDGFESQFGADYAEHALIEGKPRLQWMADKLDEIRIQLSFHSQFC CCEEHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCC DPEAELLKLRQAQADHKAMALVLGNGDYKGWFVLTDLQATSKQTDKAGTLLALEASITLR CCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECHHHCCCCCCCCCEEEEEHHHHHH EYVGDKKKPLPPAVQPAQPPAAAVASPVGQAAGKLKTATSSVRDNIRQAVAYANQGQAAI HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RLARDSAQLARQMASNPQAALGRMSGLLADAQRAATPLQQLAEVSGKLPEAAGIARAGAN HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHH ALAAVRSAQNTLGSVNAGNLAGKLDIYAGYLGAAGSVLDAASPAISKLAAKVITRAI HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA