| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497558
Identifier: 34497558
GI number: 34497558
Start: 2294250
End: 2296067
Strand: Direct
Name: 34497558
Synonym: CV_2103
Alternate gene names: NA
Gene position: 2294250-2296067 (Clockwise)
Preceding gene: 34497557
Following gene: 34497559
Centisome position: 48.29
GC content: 64.91
Gene sequence:
>1818_bases ATGAAGAAGATCCGCAGATGCGAACCTCTGCTGCTGATGCTGCTGGCCGGCGCAGGACACGCGGGGGAGATCACGGTCAG CACCCTGCCTTCCGGCTTGGGAGACGGGCACCGTTTCGATCTGGGTAGCTGGAAGCTGGAGACCAAGGGGGCGATGGCGA TAGGCAGCGTGTACCGGACGGAAAATCCCAACGACGCGTTCACCAGCCATGCCAATGCGATGGATGCTCAGAACGACGGC GATCTCAACTACCGGCGCGGCGACCTGGTGTCCGAATCGTGGCAGGGCTATGCGCAGGGCGACCTGCGTCGCGGAGACGG CGGCGTGTTCGTCAGCGCCAAGGCCTGGTACGACTACGGCCTGATCCACCGCCCGGTGCCGCACGGACACGCGCCCAACC GCTACGTCCCAGGCGCGCCGCTGAGCGACGACAAGTTCACCCAGCTGGGGCGCTTCAGCGGCGCGGCGCTGGACGATGCC TACGTCTACGGCGATTACCGCCTGGGCGATGCCTCGCTGCTGCTGCGGATGGGACAGCAAGTGATCCCCTGGATCACGCC CACCACGATACTGGGCGGCATCCAGCAGGTGAATGCGATGGATTTCAACGCGCTGGGCCGCTCCGGCACCATCCCGGAAA TGGTCAATATTCCGACGCCGGCCTTCTATGCCAAGCTGAAGGCCACGCCCAAGCTGACGGTGGATGGGTATTACCAGTTC AAGTTCGCGCCCAACGCCTATCCGGCCTGCGGCACTTTCTATTCCGGCAGCGACTACGCCCAGCCCGGCTGCGACGCGCT GACGCTGAACGGCACGCTGCTCAGCAAGTTGCTTCGACGCAATGTCGTCACCACCGACCAGCAGTCGCTTGCGAATCCGC TGGACTACATCCGGCGGGCGCCGGACGACAGGCCGTATGGCGGCGAGTTCGGATTCAGCCTCAGTTATCTGTTCGACAAT ATCGGCCTGCTGGGACTGTTCTATTCCAACCAGACCAGCATGATGAGCTTCAACCAGATGATGCGCTCCGGTCCCGGAAT TTTCCTGCCTGCCGCGGCCAATCAGGGCAAGGCCATTCCTGTCGGCATCGCCGGCCAGTTCTTGCGCGCTTATCCGGACA ATATCCACATGTACGGGGTGAATTTCCGCACCCGTTTGCCGGATGGCACCGGGGTGTACAGCGAGTTCACCTATCGGCCC AACCAGCCGGTGGCGTGGAACGGCGCCGACTTCCTGTACGGCGTGCTGGCCGGAACCGGACCGCTGGGGTATCTGGCCGC GACGCCGTCCGGCTATCTGGCGCGCGGCTACGACACCTTCGGCAGCAGCCAGTTCAACCTGGGCGCGTCCAAGGCGCTGG GACGCTGGTTGGGCGGGGAGGCCAGGCTGTCGGCCGAGGCGGCCGTCAAGCATCTGTCCGGGCTGCCGGACGCCTACGCG ATGCGCTACGGCCGCGTCGGTTTCGGCCAGGCGCCCAGCGCGTCCTCTCCCTCCTGTAACGGCTCGGGTCCGAGCTGCGC GCTGGACGGCTTCGTGACCGCCAACGCCTGGGGCTGGCGCGCCAAGCTGGAACAGCATTATTACGGCGCGCTGCCCGGTC TGGATTTGATGCCGTCGCTGGCGCTGGCCTACGACGTCAAGGGCTATTCCCACGATGGGCAGTTCATGGAGGGGCGGCGC AGCGCGCTGTGGCGGCTGCAGGCGGAATACAGGAAGCGCTATCAGTTCGAGCTGCTGTATCTGAAAACGGCCGGGGGCGA TTACAACACCCTGCAGGACCGCAGCCTGGCGATGGTCAGCGCCGGCATCAAGTTCTGA
Upstream 100 bases:
>100_bases GGCCAGTTACTGGGTAAAGCTGGCCGAAGCATTTCTGCGTTAGCAGGGCAGCGCGGCGCCGGGGGCGCCGCGACGATGAT AAGAATGGGGAGATGGTCAG
Downstream 100 bases:
>100_bases TGCGCCAGATTCAGGCAGGCCTGCAAGTTAATCAAATTGAATGGTCAGCTTATCTTCAATATGCATTGAATGATCCGTGC AAATACTAGGCCGGTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MKKIRRCEPLLLMLLAGAGHAGEITVSTLPSGLGDGHRFDLGSWKLETKGAMAIGSVYRTENPNDAFTSHANAMDAQNDG DLNYRRGDLVSESWQGYAQGDLRRGDGGVFVSAKAWYDYGLIHRPVPHGHAPNRYVPGAPLSDDKFTQLGRFSGAALDDA YVYGDYRLGDASLLLRMGQQVIPWITPTTILGGIQQVNAMDFNALGRSGTIPEMVNIPTPAFYAKLKATPKLTVDGYYQF KFAPNAYPACGTFYSGSDYAQPGCDALTLNGTLLSKLLRRNVVTTDQQSLANPLDYIRRAPDDRPYGGEFGFSLSYLFDN IGLLGLFYSNQTSMMSFNQMMRSGPGIFLPAAANQGKAIPVGIAGQFLRAYPDNIHMYGVNFRTRLPDGTGVYSEFTYRP NQPVAWNGADFLYGVLAGTGPLGYLAATPSGYLARGYDTFGSSQFNLGASKALGRWLGGEARLSAEAAVKHLSGLPDAYA MRYGRVGFGQAPSASSPSCNGSGPSCALDGFVTANAWGWRAKLEQHYYGALPGLDLMPSLALAYDVKGYSHDGQFMEGRR SALWRLQAEYRKRYQFELLYLKTAGGDYNTLQDRSLAMVSAGIKF
Sequences:
>Translated_605_residues MKKIRRCEPLLLMLLAGAGHAGEITVSTLPSGLGDGHRFDLGSWKLETKGAMAIGSVYRTENPNDAFTSHANAMDAQNDG DLNYRRGDLVSESWQGYAQGDLRRGDGGVFVSAKAWYDYGLIHRPVPHGHAPNRYVPGAPLSDDKFTQLGRFSGAALDDA YVYGDYRLGDASLLLRMGQQVIPWITPTTILGGIQQVNAMDFNALGRSGTIPEMVNIPTPAFYAKLKATPKLTVDGYYQF KFAPNAYPACGTFYSGSDYAQPGCDALTLNGTLLSKLLRRNVVTTDQQSLANPLDYIRRAPDDRPYGGEFGFSLSYLFDN IGLLGLFYSNQTSMMSFNQMMRSGPGIFLPAAANQGKAIPVGIAGQFLRAYPDNIHMYGVNFRTRLPDGTGVYSEFTYRP NQPVAWNGADFLYGVLAGTGPLGYLAATPSGYLARGYDTFGSSQFNLGASKALGRWLGGEARLSAEAAVKHLSGLPDAYA MRYGRVGFGQAPSASSPSCNGSGPSCALDGFVTANAWGWRAKLEQHYYGALPGLDLMPSLALAYDVKGYSHDGQFMEGRR SALWRLQAEYRKRYQFELLYLKTAGGDYNTLQDRSLAMVSAGIKF >Mature_605_residues MKKIRRCEPLLLMLLAGAGHAGEITVSTLPSGLGDGHRFDLGSWKLETKGAMAIGSVYRTENPNDAFTSHANAMDAQNDG DLNYRRGDLVSESWQGYAQGDLRRGDGGVFVSAKAWYDYGLIHRPVPHGHAPNRYVPGAPLSDDKFTQLGRFSGAALDDA YVYGDYRLGDASLLLRMGQQVIPWITPTTILGGIQQVNAMDFNALGRSGTIPEMVNIPTPAFYAKLKATPKLTVDGYYQF KFAPNAYPACGTFYSGSDYAQPGCDALTLNGTLLSKLLRRNVVTTDQQSLANPLDYIRRAPDDRPYGGEFGFSLSYLFDN IGLLGLFYSNQTSMMSFNQMMRSGPGIFLPAAANQGKAIPVGIAGQFLRAYPDNIHMYGVNFRTRLPDGTGVYSEFTYRP NQPVAWNGADFLYGVLAGTGPLGYLAATPSGYLARGYDTFGSSQFNLGASKALGRWLGGEARLSAEAAVKHLSGLPDAYA MRYGRVGFGQAPSASSPSCNGSGPSCALDGFVTANAWGWRAKLEQHYYGALPGLDLMPSLALAYDVKGYSHDGQFMEGRR SALWRLQAEYRKRYQFELLYLKTAGGDYNTLQDRSLAMVSAGIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65771; Mature: 65771
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRRCEPLLLMLLAGAGHAGEITVSTLPSGLGDGHRFDLGSWKLETKGAMAIGSVYRT CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCEEECCCCCEEEHHEEEC ENPNDAFTSHANAMDAQNDGDLNYRRGDLVSESWQGYAQGDLRRGDGGVFVSAKAWYDYG CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCEEEEEEHEECCC LIHRPVPHGHAPNRYVPGAPLSDDKFTQLGRFSGAALDDAYVYGDYRLGDASLLLRMGQQ CEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECEEECHHHHHHHHCHH VIPWITPTTILGGIQQVNAMDFNALGRSGTIPEMVNIPTPAFYAKLKATPKLTVDGYYQF HCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHCCCCCHHHHHEECCCCEEEECCEEEE KFAPNAYPACGTFYSGSDYAQPGCDALTLNGTLLSKLLRRNVVTTDQQSLANPLDYIRRA EECCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC PDDRPYGGEFGFSLSYLFDNIGLLGLFYSNQTSMMSFNQMMRSGPGIFLPAAANQGKAIP CCCCCCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCEEE VGIAGQFLRAYPDNIHMYGVNFRTRLPDGTGVYSEFTYRPNQPVAWNGADFLYGVLAGTG ECHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCEEECCHHHHHHHHHCCC PLGYLAATPSGYLARGYDTFGSSQFNLGASKALGRWLGGEARLSAEAAVKHLSGLPDAYA CCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCEECHHHHHHHHHCCCHHHH MRYGRVGFGQAPSASSPSCNGSGPSCALDGFVTANAWGWRAKLEQHYYGALPGLDLMPSL HHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCHHHHHHHHHHCCCCCCHHHHHH ALAYDVKGYSHDGQFMEGRRSALWRLQAEYRKRYQFELLYLKTAGGDYNTLQDRSLAMVS HEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCEEEEC AGIKF CCCCC >Mature Secondary Structure MKKIRRCEPLLLMLLAGAGHAGEITVSTLPSGLGDGHRFDLGSWKLETKGAMAIGSVYRT CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCEEECCCCCEEEHHEEEC ENPNDAFTSHANAMDAQNDGDLNYRRGDLVSESWQGYAQGDLRRGDGGVFVSAKAWYDYG CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCEEEEEEHEECCC LIHRPVPHGHAPNRYVPGAPLSDDKFTQLGRFSGAALDDAYVYGDYRLGDASLLLRMGQQ CEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECEEECHHHHHHHHCHH VIPWITPTTILGGIQQVNAMDFNALGRSGTIPEMVNIPTPAFYAKLKATPKLTVDGYYQF HCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHCCCCCHHHHHEECCCCEEEECCEEEE KFAPNAYPACGTFYSGSDYAQPGCDALTLNGTLLSKLLRRNVVTTDQQSLANPLDYIRRA EECCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC PDDRPYGGEFGFSLSYLFDNIGLLGLFYSNQTSMMSFNQMMRSGPGIFLPAAANQGKAIP CCCCCCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCEEE VGIAGQFLRAYPDNIHMYGVNFRTRLPDGTGVYSEFTYRPNQPVAWNGADFLYGVLAGTG ECHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCEEECCHHHHHHHHHCCC PLGYLAATPSGYLARGYDTFGSSQFNLGASKALGRWLGGEARLSAEAAVKHLSGLPDAYA CCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCEECHHHHHHHHHCCCHHHH MRYGRVGFGQAPSASSPSCNGSGPSCALDGFVTANAWGWRAKLEQHYYGALPGLDLMPSL HHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCHHHHHHHHHHCCCCCCHHHHHH ALAYDVKGYSHDGQFMEGRRSALWRLQAEYRKRYQFELLYLKTAGGDYNTLQDRSLAMVS HEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCEEEEC AGIKF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA