| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is grxC [C]
Identifier: 34497491
GI number: 34497491
Start: 2218924
End: 2219655
Strand: Direct
Name: grxC [C]
Synonym: CV_2036
Alternate gene names: 34497491
Gene position: 2218924-2219655 (Clockwise)
Preceding gene: 34497485
Following gene: 34497492
Centisome position: 46.7
GC content: 62.16
Gene sequence:
>732_bases ATGCTGCAAAATCGTGAAGGCCAACGCGTACCGAACGTCACTTTCCGCATCCGTGAAAACAACGAGTGGAAGAATGTTAC CACCGCCGAGCTGTTCGACGGCAAAACCGTCGCCCTGTTCTCGCTGCCGGGCGCGTTCACTCCGACCTGCTCCTCCACCC ACCTGCCGCGCTTCAACGAGCTGGCGCCGGCCTTCTTCGCCAACGGCGTGGACGCCATCCTGTGCGTATCGGTCAACGAC ACCTTCGTGATGAATGAATGGGCCAAGGACCAGGAAGCGCAGAACATCGTGATGATCCCGGATGGCAACGGCGACTTCAC CGAAGGCATGGGCATGCTGGTGGACAAGCAGGACCTGGGCTTCGGCAAGCGCAGCTGGCGCTACTCGATGCTGGTCAAGG ACGGCGTGGTGGACAAGATGTTCGTCGAGCCGCAGGAGCCGGGCGATCCGTTCAAGGTGTCCGACGCCGACACCCTGCTG AACTACATCAACCCGAGCGCCAAGAAGCCTGACCAAGTGGTCGTCTTCACCAAGGTGGGCTGCCCGCACTGCGCGCGCGC CAAGGCCGTGCTGGCCGAAAACGGCTACGACTTCGTCGAAGTGCCGCTGGACAACAAGATCCGCGGCAAGGTGCTGGGCG CGGTGTCCGGCGCGATGACCGCCCCGCAGGTGTTCATCAACGGCGAGCTGATCGGTTCCGCCGACGAAGTGGAAAAGCGC TTCGCCAAGTAA
Upstream 100 bases:
>100_bases TCAAAAGTCTTGTGACAATCAATTAGACGAATTTTGTCATGGCTATCAGAATGCACTCATCGATAGCTAACAACCGCAGT CAACCCTCAAGGAGATAGCC
Downstream 100 bases:
>100_bases GACGTTCGTCGCCGATGGTTTCGGGCCCTGACGCCATCGGCAATCTTTGGGCCGGTACTCCTGCCGGCCGTTTTTTCCAG CCGGGATGCGGGACGGCATG
Product: peroxiredoxin/glutaredoxin family protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MLQNREGQRVPNVTFRIRENNEWKNVTTAELFDGKTVALFSLPGAFTPTCSSTHLPRFNELAPAFFANGVDAILCVSVND TFVMNEWAKDQEAQNIVMIPDGNGDFTEGMGMLVDKQDLGFGKRSWRYSMLVKDGVVDKMFVEPQEPGDPFKVSDADTLL NYINPSAKKPDQVVVFTKVGCPHCARAKAVLAENGYDFVEVPLDNKIRGKVLGAVSGAMTAPQVFINGELIGSADEVEKR FAK
Sequences:
>Translated_243_residues MLQNREGQRVPNVTFRIRENNEWKNVTTAELFDGKTVALFSLPGAFTPTCSSTHLPRFNELAPAFFANGVDAILCVSVND TFVMNEWAKDQEAQNIVMIPDGNGDFTEGMGMLVDKQDLGFGKRSWRYSMLVKDGVVDKMFVEPQEPGDPFKVSDADTLL NYINPSAKKPDQVVVFTKVGCPHCARAKAVLAENGYDFVEVPLDNKIRGKVLGAVSGAMTAPQVFINGELIGSADEVEKR FAK >Mature_243_residues MLQNREGQRVPNVTFRIRENNEWKNVTTAELFDGKTVALFSLPGAFTPTCSSTHLPRFNELAPAFFANGVDAILCVSVND TFVMNEWAKDQEAQNIVMIPDGNGDFTEGMGMLVDKQDLGFGKRSWRYSMLVKDGVVDKMFVEPQEPGDPFKVSDADTLL NYINPSAKKPDQVVVFTKVGCPHCARAKAVLAENGYDFVEVPLDNKIRGKVLGAVSGAMTAPQVFINGELIGSADEVEKR FAK
Specific function: The Disulfide Bond Functions As An Electron Carrier In The Glutathione-Dependent Synthesis Of Deoxyribonucleotides By The Enzyme Ribonucleotide Reductase. In Addition, It Is Also Involved In Reducing Some Disulfides In A Coupled System With Glutathione R
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=145, Percent_Identity=42.7586206896552, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI78706776, Length=146, Percent_Identity=41.0958904109589, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI78709078, Length=146, Percent_Identity=41.0958904109589, Blast_Score=104, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR011906 - InterPro: IPR014025 - InterPro: IPR013740 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin; PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 26757; Mature: 26757
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNREGQRVPNVTFRIRENNEWKNVTTAELFDGKTVALFSLPGAFTPTCSSTHLPRFNE CCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHH LAPAFFANGVDAILCVSVNDTFVMNEWAKDQEAQNIVMIPDGNGDFTEGMGMLVDKQDLG HCHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCC FGKRSWRYSMLVKDGVVDKMFVEPQEPGDPFKVSDADTLLNYINPSAKKPDQVVVFTKVG CCCCCEEEEEEEECCCCCEEEECCCCCCCCEEECCHHHHHHHCCCCCCCCCEEEEEEECC CPHCARAKAVLAENGYDFVEVPLDNKIRGKVLGAVSGAMTAPQVFINGELIGSADEVEKR CCCHHHHHEEEECCCCCEEEECCCCCCCCEEEEHHHCCCCCCEEEECCEEECCHHHHHHH FAK HCC >Mature Secondary Structure MLQNREGQRVPNVTFRIRENNEWKNVTTAELFDGKTVALFSLPGAFTPTCSSTHLPRFNE CCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHH LAPAFFANGVDAILCVSVNDTFVMNEWAKDQEAQNIVMIPDGNGDFTEGMGMLVDKQDLG HCHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCC FGKRSWRYSMLVKDGVVDKMFVEPQEPGDPFKVSDADTLLNYINPSAKKPDQVVVFTKVG CCCCCEEEEEEEECCCCCEEEECCCCCCCCEEECCHHHHHHHCCCCCCCCCEEEEEEECC CPHCARAKAVLAENGYDFVEVPLDNKIRGKVLGAVSGAMTAPQVFINGELIGSADEVEKR CCCHHHHHEEEECCCCCEEEECCCCCCCCEEEEHHHCCCCCCEEEECCEEECCHHHHHHH FAK HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]